Conserved Protein Domain Family
Cmr3

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COG1769: Cmr3 
CRISPR-Cas system type III CMR-effector complex subunit Cmr3, RAMP superfamily Cas5 group [Defense mechanisms]
CRISPR-Cas system type III CMR-effector complex subunit Cmr3, RAMP superfamily Cas5 group is part of the Pathway/BioSystem: CRISPR-Cas system
Statistics
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PSSM-Id: 441375
Aligned: 52 rows
Threshold Bit Score: 203.724
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_013565014  12 ASLVTLKAHDVWFFRNSKPFGSGaaTSALAETTKLPMPSVVFGAARTALGETLEGDWShyydgslAGAVkrqrlgppeid 91 
BBD53280       1 MFWYKITPIDVLLFRDAKPFTPG--ERAWAGSIFPPNGHTLGSAIRSYLGTSDPVD------------------------ 54 
WP_011153757   1 MYWYSLTPLDILLLRDAKPFTPG--DRAWAGSIFPPNGHTLAGAVRSLLPQNQTIS------------------------ 54 
WP_013334739   4 LKWYRITPLDVLLFRDAKPFSPG--ERAWAGSIFPPPGHAIAGAIRDLIQSNITIK------------------------ 57 
WP_015221261   1 MFWYKLTPIDVLLLRDGKPFSPG--ERAWAASVFPPNGHTLAGAIRGLLGKKTNFN------------------------ 54 
WP_015217681   1 MHWYKITPLDLLLFRDCKPFSPG--DGSWAKGLFPPMPITVFQAMRSLLPQTNHEN------------------------ 54 
WP_044616064   6 TLDVDFTPVDSWFFRESRPFDAI--GTSQLGSVFPPPASTVLGAFRNWVGRQLNVDWAty----kFKEQmltl------p 73 
WP_088619259  43 AVNLSFAPIDTWFFRESRPHDAA--GASELSSLFPPPVRTLMGAVRSFLGDNLGVDWRqfnrngvyTELkqai------g 114
WP_089416926  47 AQTWQFEPLDTWFFRESRPLESV--GGAQLTSQFPPPVRTLVGAIRTTIGDALGVNWQdyq-sqpDHPLraqm------g 117
WP_096722149   1 MYWYTLTPLDILLFRDAKPFTPG--ERAWAASIFPPNGHAIAGAIRGLLGSTTNIN------------------------ 54 
WP_013565014  92 psDgsawPASAVRLSGVLPARWFg-------dWTRAEPLFPVPMFVT------VRKAATFetssdasdNv----RLAq-- 152
BBD53280      55 -------------LKGPFFSY-------------QNQLYLPRPLGFV------GSIpl---------------iPLAwsq 87 
WP_011153757  55 -------------LIGPLLYH-------------KETLYFPRPLGFV------GKTpl---------------lPLPwhd 87 
WP_013334739  58 -------------LTGPFLTY-------------KDQLYFPFPFSYDre--hlCKRENNTavpi-------pvvPLNwdn 102
WP_015221261  55 -------------LIGSFLTY-------------GDQLYFPRPLNYV------GKNll---------------yPLPwle 87 
WP_015217681  55 --R----TQRHLSFLGPFLLD------------SQQTLWLPTPKDLVclyppgQDRKTATd-------NwseilHLQt-- 107
WP_044616064  74 dgQ----QMSAWELIGGLAGHPGlicldelglMFNQERLYPLPMGLQ------QDMEQRl-------------yRLQ--- 127
WP_088619259 115 egE----SLGALFINGAWVCK-------------NGQRLYPAPGYLM------HKTDEf--------------vRLQ--- 154
WP_089416926 118 spT----ELAPLRIEGPYLMQ-------------NGQRLYPAPLVVM------GKSEGTGm------------tRLA--- 159
WP_096722149  55 -------------LKGTFLSY-------------QQELFFPRPLNYV------NNSll---------------hPLTwlp 87 
WP_013565014 153 ---PSd----hDV-IGfvgDDQ-GLRP---VLTpitSrdTLESp---fVGKPA-TGWLQRDDFVALACGqsph----gdl 212
BBD53280      88 -nsNLnqs-lwNT----------EKPCpl------vKvySSNDsededNQELKfRQYLSCNTVSQFLKTgn-------ik 142
WP_011153757  88 atsPLrsqmlwDK----------TQPApl------aPleTVSQtd-ikRDEKQaRTWLPLDVMMGYLQTga-------ik 143
WP_013334739 103 -lhPLhslletDQ----------NLPQpl------vFesKHPFn---dKLEGQySAYLDYETILEYLKTsq-------is 155
WP_015221261  88 sdyPLqki-lwDR----------LQPApl------lLkqLKERepktsKSEEKtGKYISFNQLKNLLTKav-------ne 143
WP_015217681 108 --iPK------DEea------wkHLAFdeeEIDplvLnkKWDG-----NISPP-KPWIKAEALFGYLRGqknhsncaqkd 167
WP_044616064 128 ---DS------EP-VRc-dLGFiRLPR---AVT------HPGV-----RTRAItNTWITAEGLRTYLAGgi-------pa 175
WP_088619259 155 ---IG------GV-VEc-dLGNvRLPE---------Lp-KGKA-----GYKNMeQTWVTPAGWQKLLQGda-------pt 201
WP_089416926 160 ---PS------ETpVRc-dLGRvHLP-------------KAAE-----RVKPLdECWLTAQGLVAVLEGkv-------ps 204
WP_096722149  88 eksPYkqm-iwDR----------LSPApl------iQteKKKEn----KTKQHiRNYLPYSVINKILTKqt-------lk 139
WP_013565014 213 TER----LID---ESEFAETETRVGIARDNHRRTVQQ-GMLYQIQVDRWRTlsqsgnasGYGLMARVENADade------ 278
BBD53280     143 KQDw---LAKddtETELWKVETRSHNTIQEGTRQVKDsDGYFVENTIRMAT--------GWSLAIGLnqd---------- 201
WP_011153757 144 PEDw---ARPedeDSQPWTMESRPHNSIEAGTRQVKEsDGYFVENGIRLKE--------NWSLAIAVDPTThqql---qs 209
WP_013334739 156 VEKwqknRIKdneSPQPWKIETRPHNTITQGTRQVLEeDGYFVENTIRLQD--------GWSLAVGIKAKSedenl--kl 225
WP_015221261 144 HHNkvelELEnpvESEPYFSETRSHNAINSQTGQVKEsDGYFVENAIRLKQ--------GWSLAIALdfk---------- 205
WP_015217681 168 SEKpstsWDQkdfHHNPWKTQVLPHIQMQPDKRQVKDaDGYFTEVAVRLED--------GWCFIAALsvd---------i 230
WP_044616064 176 EHT----LKP---ESELIVQEPHIGIALSRG-RTIKE-QMFYQTRHIRLHQ--------GVSVFARFSGLPeelin--ll 236
WP_088619259 202 KEE----LVK---AEDLFGKEPRLGIARNNQTRSVLE-GKLYQTQHLRLKN--------DVTVELDVKGLHeslaeklpi 265
WP_089416926 205 EDQ----MCK---AKSMVHAEPRLGIALDGHARRPLN-GLLYQTRHLRLKE--------GVSVGLTVRGLDlaeks--gq 266
WP_096722149 140 LEDw---LCQtgeKPQPWSIETRSHNSLNLNTRQVKDaDGYFVENAVRLHS--------GWSLAIGIeqk---------i 199
WP_013565014 279 laTSSAWRLGGESRWAWAAVARDd--------sEQPWLNakvrGLILd-----aIRAHR-RWWMTLASPAV--FD-HGWR 341
BBD53280     202 ikTPAIIQLGGEGHRAILERCEPldqq----wqtLKNTS----DKNFe--------tGG-KSIAYLVTPGV--FE-RKHD 261
WP_011153757 210 lpQPLSMRLGGEGHRVTLVHRPAldqq----wqrLQTLS----DQNYq--------qRQ-KAIAYLMTPGI--FE-RGRD 269
WP_013334739 226 tdNSQIIRLGGEGHRAILESCPQlgeq----wqeLEKIS----QGN--------QKKAG-KKIAYLVTPGV--FE-RRQR 285
WP_015221261 206 lpTPNIMQLGGEGHRVIIEECPDlaqq----wqeLTKLS----QGNFee----nQANKS-KSLAYLTTTGI--FE-RKYQ 269
WP_015217681 231 laRESIVRLGGEGHRALVSHLEPndtlkgqldfLLESDS----EALLqavrippDYSSTvPNFAYLLTPGLglFEeTSYR 306
WP_044616064 237 dgGSDHIRFGGEGRQAAIRCQRSd--------aDLPISE---------------CPKNR-DFTMTLLTAAS--FR-NGDQ 289
WP_088619259 266 asKHQILRLGGEGRMAVLAKNSHy--------gQLPTLT----ANKP-------DWPAK-KIIVHIITPAY--FD-GLMF 322
WP_089416926 267 lgPKGVARLGGEGRLAAWSRHTEq---------KLPQVSl--------------KQDAK-RLMLTLLTPAR--FS-QGWL 319
WP_096722149 200 anTPTSMKLGGEGHRVLIEECPElgkq----wqkLQQIS----NDNFkq----aQQKQE-KVMAYLITPGV--FE-RIHQ 263
WP_013565014 342 ---------PSWIQIRPgedrssle-aiwpndaDGTpLGQLVGLLLKAPQTQSGWDIA-HK-----R------------P 393
BBD53280     262 agksicrawPWEWKLAHtt------------nhNQT-PGSLVSVATEKPVAIS-CRFReKT-----Enk--------siP 314
WP_011153757 270 gvst-crpyPWEWKLTHn-------------------QGSFISMATDRAVAIS-PRIRdRQ-----Rnpg------hsiP 317
WP_013334739 286 nnhphckpsPWEWTTAYpn------------npTQE-KGYLVSFATDKPLVIS-NRMRfGD-----Nis---------tP 337
WP_015221261 270 nnkvycqawPWEWKLAHrv------------ngNQT-IGNLVSVATAKPVPIS-CRIQdRE-----Knt--------siP 322
WP_015217681 307 a-------yPQAW------------------------KEHLKGCATDKALLWGGVSTL-RKdidnnKtre------esaL 348
WP_044616064 290 ---------PDWLPADAkqctaedgsdywqvniADT-PVQILSAVVGKTLRQGGWDMA-LG-----G------------P 341
WP_088619259 323 ---------PKGFDKREiggqtv-----wqgtlLGI-ELIIEAAVIGKAHREGGWDMQ-KH-----Q------------P 369
WP_089416926 320 ---------PDGFEQKQktcngedv-tgwcgklADR-SVTLVCAVTGKPLRQGGWDMA-TH-----Q------------P 370
WP_096722149 264 nqqsvcksyPWEWKLAHtt------------nsNQT-EGNLVSVATAQPIAIS-GRIRdSN-----NndgqkkplsksiP 324
WP_013565014 394 KRICRMAPIGAVWFFEFNDA-MSDQvvesaltvLDRHLQGRCI-AD-------------RQ-AHAGYGLAFVGAWSS 454
BBD53280     315 APQVFAASPGSLYYLEKPES----------------------LfQDnag-------mkaNNwRKLGYSELLWINYQg 362
WP_011153757 318 APQVFAAPPGTVYYLNQPQG----------------------LfADqdna-----pkhlQQtRKLGYSHLLWVNLQE 367
WP_013334739 338 APQVYAAPAGTVYYLESNSEi--------------------ILyQDsnas------kqiQRwRDLGYSELLWISYQ- 387
WP_015221261 323 APQVFGATAGSVYYLNQPEY----------------------LyAEnpqspptkglevaKKwRSLGYSQLLWFKY-- 375
WP_015217681 349 LPQRAFVPPGTVYLFNHEVA-TNQQvl---------------pnGDvn---------wlQTfRRLNYGKLLWGRRNL 400
WP_044616064 342 KPVTSLIPAGSTYFCQLPED-VQPR--------VLEQLQYQWV-GH--------------E-RNLGRGLICIGNINr 393
WP_088619259 370 RAVKSYIPAGSAWFCRIVTEiSNKE--------LLEKLHGQSI-GA--------------E-TEWGRGQILIGVWnd 422
WP_089416926 371 RDLYGLVPAGSCYFFELDSAeDAQA--------IAKACHGGQL-GH--------------D-QAWGYGQVAVGVW-- 421
WP_096722149 325 APQVFAAPAGSVYYLNQPDT----------------------LyQDsdka-----skqdRNrRLLGYSELLWICY-- 372
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