1Y1U,1BF5


Conserved Protein Domain Family
SH2_STAT_family

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cd09919: SH2_STAT_family 
Click on image for an interactive view with Cn3D
Src homology 2 (SH2) domain found in signal transducer and activator of transcription (STAT) family
STAT proteins mediate the signaling of cytokines and a number of growth factors from the receptors of these extracellular signaling molecules to the cell nucleus. STATs are specifically phosphorylated by receptor-associated Janus kinases, receptor tyrosine kinases, or cytoplasmic tyrosine kinases. The phosphorylated STAT molecules dimerize by reciprocal binding of their SH2 domains to the phosphotyrosine residues. These dimeric STATs translocate into the nucleus, bind to specific DNA sequences, and regulate the transcription of their target genes. However there are a number of unphosphorylated STATs that travel between the cytoplasm and nucleus and some STATs that exist as dimers in unstimulated cells that can exert biological functions independent of being activated by a receptor. There are seven mammalian STAT family members which have been identified: STAT1, STAT2, STAT3, STAT4, STAT5 (STAT5A and STAT5B), and STAT6. There are 6 conserved domains in STAT: N-terminal domain (NTD), coiled-coil domain (CCD), DNA-binding domain (DBD), alpha-helical linker domain (LD), SH2 domain, and transactivation domain (TAD). NTD is involved in dimerization of unphosphorylated STATs monomers and for the tetramerization between STAT1, STAT3, STAT4 and STAT5 on promoters with two or more tandem STAT binding sites. It also plays a role in promoting interactions with transcriptional co-activators such as CREB binding protein (CBP)/p300, as well as being important for nuclear import and deactivation of STATs involving tyrosine de-phosphorylation. The CCD interacts with other proteins, such as IFN regulatory protein 9 (IRF-9/p48) with STAT1 and c-JUN with STAT3 and is also thought to participate in the negative regulation of these proteins. Distinct genes are bound to STATs via their DBD domain. This domain is also involved in nuclear translocation of activated STAT1 and STAT3 phosphorylated dimers upon cytokine stimulation. LD links the DNA-binding and SH2 domains and is important for the transcriptional activation of STAT1 in response to IFN-gamma. It also plays a role in protein-protein interactions and has also been implicated in the constitutive nucleocytoplasmic shuttling of unphosphorylated STATs in resting cells. The SH2 domain is necessary for receptor association and tyrosine phosphodimer formation. Residues within this domain may be particularly important for some cellular functions mediated by the STATs as well as residues adjacent to this domain. The TAD interacts with several proteins, namely minichromosome maintenance complex component 5 (MCM5), breast cancer 1 (BRCA1) and CBP/p300. TAD also contains a modulatory phosphorylation site that regulates STAT activity and is necessary for maximal transcription of a number of target genes. The conserved tyrosine residue present in the C-terminus is crucial for dimerization via interaction with the SH2 domain upon the interaction of the ligand with the receptor. STAT activation by tyrosine phosphorylation also determines nuclear import and retention, DNA binding to specific DNA elements in the promoters of responsive genes, and transcriptional activation of STAT dimers. In addition to the SH2 domain there is a coiled-coil domain, a DNA binding domain, and a transactivation domain in the STAT proteins. In general SH2 domains are involved in signal transduction. They typically bind pTyr-containing ligands via two surface pockets, a pTyr and hydrophobic binding pocket, allowing proteins with SH2 domains to localize to tyrosine phosphorylated sites.
Statistics
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PSSM-Id: 198175
Aligned: 66 rows
Threshold Bit Score: 97.2698
Created: 25-Feb-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
phosphotyrosinehydrophobichomodimer
Conserved site includes 4 residues -Click on image for an interactive view with Cn3D
Feature 1:phosphotyrosine binding pocket [polypeptide binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                #                 #                            # #   
1Y1U_A    446 WFDGVMEVLKKHHKPHWNDGAILGFVNKQQAHDLLINKpDGTFLLRFSDSEIGGITIAWKFDSpd-----rnLWNLKPFT 520  house mouse
Q9NAD6    457 WFFSIMQLIKQKLLKFWDEGWCIGFISKNDASQSMMMCqHSSFLLRFSDSQTGAVSIGFVCEEadg---qkiPFHLAPFT 533  nematode
Q61AP6    457 WFFSIMQLIKQKLLKYWDEGWCIGFISKHDASQSMCMLpNTSFLLRFSDTQTGAVSIGFVCQDddg---qkvPFHLSPLT 533  Caenorhabditis br...
CAN99759  457 WFFSIMQLIKQKLLKFWDEGWCIGFISKNDASQSMMMCqHSSFLLRFSDSQTGAVSIGFVCEEadg---qkiPFHLAPFT 533  nematode
Q20977    433 WFFKLAEITNKYLYSMWYDGLVYGFCSKEDAENILRCIpRSVLLVRFSDIEYGKIKISVKNRNg--------EIRHHWYE 504  nematode
CBK19474  625 ELLQIFHDTRNNVRKLWEMGFLMGFMEFEEVDNMLEKH-KSALIMRLSFVTGGTICFTVKSLAhtldprssrPIHLEPLD 703  nematode
CBK19475  529 ELLQIFHDTRNNVRKLWEMGFLMGFMEFEEVDNMLEKH-KSALIMRLSFVTGGTICFTVKSLAhtldprssrPIHLEPLD 607  nematode
EFO96536  276 WFFSIMQLIKQKLLKYWDEGWCIGFISKHDASQSMMMSpHSSFLLRFSDTQTGAVSIGFVCDEegq----kvPFHLAPLT 351  Caenorhabditis re...
EFO96540  463 WFFSIMQLIKQKLLKYWDEGWCIGFISKHDASQSMMMSpHSSFLLRFSDTQTGAVSIGFVCDEegq----kvPFHLAPLT 538  Caenorhabditis re...
EFV51322  453 WFFEIAALIKQKLLRLWDDGLITGFISREDARSLLLSLhESSFLLRFSDSHLGGRREVFPLAPf-------tGKDLDHLS 525  Trichinella spiralis
Feature 1                                                                   
1Y1U_A    521 TRDFsIRSLADRLGDLn----------------YLIYVFP--------DRPKDEVFAKYYTP 558  house mouse
Q9NAD6    534 IKDLdQLSLASRIASCpq-------------lkDIRYMYP--------AIDKEEMLRFFESE 574  nematode
Q61AP6    534 IKDLdQLSLASRIASCpq-------------lkDIRYMYP--------NIDKEEMLRYFESE 574  Caenorhabditis briggsae
CAN99759  534 IKDLdQLSLASRIASCpq-------------lkDIRYMYP--------AIDKEEMLRFFESE 574  nematode
Q20977    505 HADLnARSLNSELLSNhk-------------fsDVDLIYP--------DIDLEVALGGRNKP 545  nematode
CBK19474  704 LKRLqQKCLKDYLRDIadaekvkyiltaneeviNIESLLEslk--elgVKPENPSESREISS 763  nematode
CBK19475  608 LKRLqQKCLKDYLRDIadaekvkyiltaneeviNIESLLEslk--elgVKPENPSESREISS 667  nematode
EFO96536  352 IKDLdQLSLASRIASCpq-------------lrDIRYMYP--------HIDKEEMLRYFESE 392  Caenorhabditis remanei
EFO96540  539 IKDLdQLSLASRIASCpqlrdiry-shhsqlsaVSFFLFQihvsphrqGRDTNGNFRRMSNA 599  Caenorhabditis remanei
EFV51322  526 LCSR-IARCPQLLHIGrv--------------yGAESCYDk------sVIFREEAEGKVTSQ 566  Trichinella spiralis

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