Conserved Protein Domain Family
Elf4

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pfam07011: Elf4 
Early Flowering 4 domain
This domain forms an alpha-helical homodimer in ELF4 proteins. Protein EARLY FLOWERING 4 (Elf4) is a component of the central CCA1/LHY-TOC1 feedback loop in the circadian clock that promotes clock accuracy and is required for sustained rhythms in the absence of daily light/dark cycles.
Statistics
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PSSM-Id: 429247
Aligned: 23 rows
Threshold Bit Score: 111.603
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_002325630  61 QVHSKILQTFQKSFVQVEDILDQNRLLINEINQNQESKIPDKLTRDVGLIKELNINIRRAVGLYADLSCNFNiRSMEPSS 140
XP_002311221  34 EVDAEVWATFNNSFRQVQSVLDRNRVLIQQVNENHQSRTPDNMVKNVSLIQELNGNISKVVGLYSDLNSNFS-TAYHQRN 112
XP_002533647  44 AGDPQVWSTFNTTFRQVQSVLDRNRSLIQQVNENHQSRIPDNMVKNVALIQELNGNISKVVSLYSDLNSNFS-SSYHQHR 122
O04211        20 GEDPAMWENLDRNFRQVQSVLDRNRSLIQQVNDNHQSRMADNMSKNVALIQELNGNISKVVNMYSDLNTSFS-SGFHGGK 98  thale cress
Q5GA60        33 EGNSDVWNNFSNRFRQVQSVLDRNRSLIQQVNENHQSRTTDNMVRNVSLIQELNGNISKVVSLYSDISTNFS-TMFRQGN 111 tomato
XP_002270733  46 EGSAEVWETFNDSFRQVQSVLDRNRVLIQQVNENHQSKIPDNLVKNVALIQEINGNISKVVSLYSDLSTNFS-GVFHQPH 124
XP_006350838  37 GYDTEAWETITKCFREVQSVLDQNRALIQQVNENHQSKLRDNLVKNVALIRDINSNISKVSRLYSDLSVDFC-NIVHRRR 115
XP_010650900  25 GCDAEVWETLSRSFDQVQSVLDQNRLLIQQVNENQQSRIHDNLVKNVSLTREINGNICKVISMYSKLSADFV-DIVRRRR 103
XP_002525644  38 ECDVEVWDTLSRSFRQVQAVLDQNRDLINQVNENHQSKVPDNLTKNISLIREINGNISKVISIYSDLSLRFS-NIVHQRR 116
O80877        32 VEDVEVWDTLSNGFKRAQLYLDQNRDLIQRVNENHMSRIPDNVSRNVGLINEINGNISQVMEIYSDLSLNFA-KKFDQRR 110 thale cress
XP_002325630 141 E--GES 144
XP_002311221 113 H--NGK 116
XP_002533647 123 N--GNG 126
O04211        99 N--GHD 102 thale cress
Q5GA60       112 DfiGDD 117 tomato
XP_002270733 125 E--NEN 128
XP_006350838 116 Elalfe 121
XP_010650900 104 A--END 107
XP_002525644 117 Rtki-- 120
O80877       111 R--TTK 114 thale cress
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