Conserved Protein Domain Family
Rnd2_Rho7

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cd04173: Rnd2_Rho7 
Rnd2/Rho7 GTPases
Rnd2/Rho7 is a member of the novel Rho subfamily Rnd, together with Rnd1/Rho6 and Rnd3/RhoE/Rho8. Rnd2/Rho7 is transiently expressed in radially migrating cells in the brain while they are within the subventricular zone of the hippocampus and cerebral cortex. These migrating cells typically develop into pyramidal neurons. Cells that exogenously expressed Rnd2/Rho7 failed to migrate to upper layers of the brain, suggesting that Rnd2/Rho7 plays a role in the radial migration and morphological changes of developing pyramidal neurons, and that Rnd2/Rho7 degradation is necessary for proper cellular migration. The Rnd2/Rho7 GEF Rapostlin is found primarily in the brain and together with Rnd2/Rho7 induces dendrite branching. Unlike Rnd1/Rho6 and Rnd3/RhoE/Rho8, which are RhoA antagonists, Rnd2/Rho7 binds the GEF Pragmin and significantly stimulates RhoA activity and Rho-A mediated cell contraction. Rnd2/Rho7 is also found to be expressed in spermatocytes and early spermatids, with male-germ-cell Rac GTPase-activating protein (MgcRacGAP), where it localizes to the Golgi-derived pro-acrosomal vesicle. Most Rho proteins contain a lipid modification site at the C-terminus, with a typical sequence motif CaaX, where a = an aliphatic amino acid and X = any amino acid. Lipid binding is essential for membrane attachment, a key feature of most Rho proteins.
Statistics
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PSSM-Id: 206736
Aligned: 3 rows
Threshold Bit Score: 469.891
Created: 1-Mar-2006
Updated: 2-Oct-2020
Structure
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Aligned Rows:
  next features
Feature 1:GTP/Mg2+ binding site [chemical binding site]
Evidence:
  • Comment:Rho molecules assume an active conformation when bound to GTP and inactive when GTP is hydrolyzed to GDP
  • Comment:Mg2+ ion plays a key role in bringing together the functional regions of the phosphate-binding, switches I and II
  • Citation:PMID 9545299

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                  ######                                      ## #                      
AAC37595       7 RCKIVVVGDAECGKTALLQVFAKDAYPGSYVPTVFENYTASFEIDKRRIELNMWDTSGSSYYDNVRPLAYPDSDAVLICF 86  human
NP_001038829   8 RCKVVVVGDTQCGKTALLHVFAKDNYPENYVPTVFENYTASFEIDKHRIELNMWDTSGSSYYDNVRPLAYPDCDAVLICF 87  zebrafish
NP_001239052   7 RCKIVVVGDTQCGKTALLHVFAKDCYPESYVPTVFENYTASFEIDKQRTELNMWDTSGSAYYDNVRPLAYPDSDAVLICF 86  chicken
Feature 1                                         # #                                        ##  
AAC37595      87 DISRPETLDSVLKKWQGETQEFCPNAKVVLVGCKLDMRTDLATLRELSKQRliPVTHEQGTVLAKQVGAvSYVECSSRSS 166 human
NP_001038829  88 DISRPETLDSITKKWQVEAQEYCPNAKLVLVGCKLDMRTDVSTLRELSKQRliPVTHEQGSLRARELGAvAYVECSSRMC 167 zebrafish
NP_001239052  87 DISRPETLDSVLKKWQGETQEFCPNAKIVLVGCKLDMRTDLNTLRELSKQRliPVTHEQGSALARQIGAvAYAECSSKVS 166 chicken
Feature 1                                                                            
AAC37595     167 ERSVRDVFHVATVASLGRgh-rQLRRTDSRRGMQRSAQLSGRPDr------gNEGEIHKDRAKSCNLM 227 human
NP_001038829 168 VNSVRDVFHITTLVSVRRepapSLKRSTSRRTLKRISNQPLLPVtsqatpleATPTLREDRAKSCTIM 235 zebrafish
NP_001239052 167 EDSVRDVFHVTTLASVNRih-kNLKHSNSKRGLKRASQMPSRTNl------lNDTEIRKDRAKSCSIM 227 chicken

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