2ZCA


Conserved Protein Domain Family
Cse2_I-E
?
cd09670: Cse2_I-E 
Click on image for an interactive view with Cn3D
CRISPR/Cas system-associated protein Cse2
CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) and associated Cas proteins comprise a system for heritable host defense by prokaryotic cells against phage and other foreign DNA; Small alpha-helical protein; also known as Cse2/CasB/YgcK family; specific gene for I-E subtype;
Links
?
Statistics
?
PSSM-Id: 187801
Aligned: 16 rows
Threshold Bit Score: 95.2127
Created: 5-Feb-2010
Updated: 2-Oct-2020
Structure
?
Program:
Drawing:
Aligned Rows:
Download Cn3D
PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection: 
2ZCA_A        6 RFLDWLKRLqgq----------kawTAARAAFRRSLafppgaypraxPYVEPFLAKgdwr--------qeeREAHYLVAA 67  Thermus thermoph...
CAE13042      8 ILLHWWQSMfmspkqlkekgiipapSTYRAQLKRCDsvem----amlTEGFRALWLslpdeislsdnpiklEYWATMAVA 83  Photorhabdus lum...
P76632        9 ALYRAWQQLd---------------NGSCAQIRRVSepde---lrdiPAFYRLVQPfgwen------prhqQALLRMVFC 64  Escherichia coli...
AAR34762      9 GLYQAWERLa---------------PGPRAELRRVErpdd---llevPAFYRLFSGrgtt-------ewekGAYQRLIFC 63  Geobacter sulfur...
CAG17976      4 QIYQAYCRLp---------------KGDQADLKRCNlskl----adsSAYFRVLKFsgtnd-----nkqtqRILYLMVAI 59  Photobacterium p...
tigr:CT1973  17 EFVIGLCQRd---------------KGAAAALRRADn----------PATEYQSWEylagfni-dlekpfeRIPYAAIAA 70  Chlorobium tepid...
CAE50738     13 FLHEVLCRReek-----------eyRQNRANLRRGAdttte--vyafPYVYPQLPQeat----------tqERLVLMRVA 69  Corynebacterium ...
NP_457331    27 TLSERYERKdgkr---------vngRAWRAELKRMAppyg----vmiCEGHDALRQallkhmr--lqpldeMALALFVSV 91  Salmonella enter...
ZP_05006968  12 RYWHRHVGAdgawrke---htggppGEDLAALRAGLgk--------pAGTVPSLWQhytsrtd--grptpeLEAEHGALS 78  Streptomyces cla...
BAC75252     20 AYTCWIEQIcr------------ddPGARTALRSGLrrtl----ddvPRMHRFVAPwlphdr---qapeseQRAYYAVAA 80  Streptomyces ave...

2ZCA_A       68 LYALKdgdh-----------------------qvgRTLARALWEKaqgs-----------asvEKRFLALLEADrd---- 109 Thermus thermoph...
CAE13042     84 LVHVKnn--------------------------sdIKLAVAAGKKgggnk---------pvvsELRFSQLQNAKtp---- 124 Photorhabdus lum...
P76632       65 LSAGKnvirhqdk---------------kseqttgISLGRALANSgr--------------inERRIFQLIRADrt---- 111 Escherichia coli...
AAR34762     64 LPCIKhsg-------------------------enISLGRALAKGrg--------------vgEKRLFQVVRSSep---- 100 Geobacter sulfur...
CAG17976     60 DLTQEed---------------------------gSSVAIALLKAgv---------------nENQIQQIIRSGdn---- 93  Photobacterium p...
tigr:CT1973  71 AIARAkaern---------------------gsagIGKAIAFCYEdrsk----------sdqaKARLRRLLACNsv---- 115 Chlorobium tepid...
CAE50738     70 ALAAEfgnipav-----------------gsdtpaKSLGRWAYEVs-----------------RQRMLDRQQQVafnpkk 115 Corynebacterium ...
NP_457331    92 AVHIKshk-------------------------enISFAAQLGEKlkgst---------scvsGLRFERLQKAS------ 131 Salmonella enter...
ZP_05006968  79 LYGLHqqsrrr------------------pmhrpgVGLGEALRRLrqsggv-------sadalDRRTAAAVNATsv---- 129 Streptomyces cla...
BAC75252     81 MIAAQprtthtspeaaleadgasqspqpapappygTSLGLAFALAvtaspgreremrestaesRLNLLTRQSANg----- 155 Streptomyces ave...

2ZCA_A      110 -------------qIAFRLRQAVALVeg---------gIDFARLLDDLLRWfs--------------peRHVQARWAREY 153 Thermus thermoph...
CAE13042    125 ------------neLLRRLCRVLQQIkg---------nISVLALARDIEEWfaeyeql-----rpckadRRIKVRWGMDY 178 Photorhabdus lum...
P76632      112 -------------aDMVQLRRLLTHAep---------vLDWPLMARMLTWWg-----------------KRERQQLLEDF 152 Escherichia coli...
AAR34762    101 -------------nDMIQLRRILRMAep---------tVNWDLAARQLWYWn-----------------DRSKRDLLEDY 141 Geobacter sulfur...
CAG17976     94 -------------gIEYLKRQLVRCKn-----------IQLKSLGKLAQYWg-----------------ENTRRQLLKEY 132 Photobacterium p...
tigr:CT1973 116 ------------eeACRILRPLFSLIdska-----avtLDYAELLSQLLWFnd--------------dsNRIKTDWATDF 164 Chlorobium tepid...
CAE50738    116 ldvvgerlaylhtqDFEEAVRAVSRLmsiasslsnvpaFDYIALYSLFSYWgngi----------seksQRVRMRVLQDY 185 Corynebacterium ...
NP_457331   132 --------------DPETFCQLLIQAvkir----gtegVNVLSLADGIFLWmeewqrrenhqpefrnpfERSRIRWANEY 193 Salmonella enter...
ZP_05006968 130 ------------paLLYRLRGLIPQLrsa------aipLDYDQLLRDLRNWahp------------esrQRVRRTWGLAY 179 Streptomyces cla...
BAC75252    156 --------------LHRHLPAAVGYLrel------gvpIDWAQLLADLIAWpl--------------hsGRISRRWLQDY 201 Streptomyces ave...

2ZCA_A      154 YGA 156 Thermus thermophilus
CAE13042    179 YRA 181 Photorhabdus luminescens subsp. laumondii TTO1
P76632      153 VLT 155 Escherichia coli K-12
AAR34762    142 FLN 144 Geobacter sulfurreducens PCA
CAG17976    133 ILA 135 Photobacterium profundum SS9
tigr:CT1973 165 YRH 167 Chlorobium tepidum TLS
CAE50738    186 YGS 188 Corynebacterium diphtheriae
NP_457331   194 LST 196 Salmonella enterica subsp. enterica serovar Typhi str. CT18
ZP_05006968 180 HTD 182 Streptomyces clavuligerus ATCC 27064
BAC75252    202 YRQ 204 Streptomyces avermitilis MA-4680
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap