7JV7


Conserved Protein Domain Family
CTK3_C

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pfam12350: CTK3_C 
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CTD kinase subunit gamma CTK3 C-terminus
The C-terminal domain kinase (CTDK-1), is a three-subunit complex comprised of Ctk1, Ctk2, and Ctk3, that plays a key role in regulation of transcription and translation and in coordinating these two processes. Both Ctk2 and Ctk3 are regulated at the level of protein turnover, and are unstable proteins processed through a ubiquitin-proteasome pathway. Their physical interaction is required to protect both subunits from degradation, and both Ctk2 and Ctk3 are required for Ctk1 CTD kinase activation. The mammalian P-TEFb is mirrored by the combined complexes in yeast of the CTDK1 and the Bur1/2. It is not clear what independent function this C-terminal domain has.
Statistics
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PSSM-Id: 432498
Aligned: 62 rows
Threshold Bit Score: 64.1973
Created: 24-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
7JV7_C       225 NILLHRMEADRELHKRSKETSWYIERPSn--Dil-dESEF-KSLWTHFETTDSGFDKDDYKNIK 284
EPY50582     155 ADILKRLEEDRERHKRMRENIWAIAKP---------EIEP-EIAWNTIEPITEGDLESLNDDFV 208
EGW32706     220 RQILSRMEDDREAHKRSKENLWVVNRDKn--SsfitEQEFlDNYWNKYHQLNKSDHEEFLNSLS 281
EMG49422     215 RSILARMEDDREAHKRSKENLWMVNRDQa-kGnfvtEDEFiEHYWNRFQPLNEEENKEFLTSLQ 277
Q5A5P9       214 RQILVRMEDDREAHKRSKENFWVVNRDKe-kGnhitEDEFvNHYWNKFQPLNDQENKEFLNSLQ 276 Candida albicans
EDK44142     221 RQIIARMEDERESHKRSKENIWCVNRNVgssSrfvsEDEFfENYWTKCQPLSKAEDHEFVRNLQ 284
CCE44973     208 KQIITRIEDDRETHKRLKENKWCVNRDKg--PkficESEFlNNYWNKCQPLTKEENAEFLNNLK 269
XP_011272742 199 DQILMRIEADRERHKRFKEVNWIVNRPSgk----veMKEF-EKIWNQYGELAEG----DYQDLK 253
XP_002491670 196 QQILARMEADRERHKRAKEKLWMVTRESys----lsFNEF-ENIDDRFSSLQD----EDYKELR 250
Q6C0W5       183 AQKLKRMEEDRERSKMERENAWVIGRN---------EDEF-ELQWDALDGGFTALDKYETQEEN 236 Yarrowia lipolytica
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