3GUD,3GW6,4UW8


Conserved Protein Domain Family
Peptidase_S74_CIMCD

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cd10144: Peptidase_S74_CIMCD 
Peptidase S74 family, C-terminal intramolecular chaperone domain of Escherichia coli phage K1F endosialidase and related proteins
This peptidase S74 family includes C-terminal intramolecular chaperone domain (CIMCD) of Escherichia coli phage K1F endosialidase, Bacillus phage GA-1 neck appendage protein, and Bacteriophage T5 L-shaped tail fibre. This domain acts as a molecular chaperone; during virus particle assembly, the CIMCD of phage tailspike proteins induces the homo-trimerization of phage tailspike proteins by chaperoning the formation of a triple beta-helix. Homo-trimeric phage tailspike proteins are then auto-cleaved by the CIMCD domain. This family also includes the peptidase S74 Intramolecular Chaperone Auto-processing (ICA) domain of mammalian Myrf. The ICA domain drives the homo-oligomerization of Myrf in the endoplasmic reticulum (ER) membrane. The homo-oligomeric Myrf is proteolyzed by the ICA domain, releasing its N-terminal fragments from the ER membrane.
Links
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Statistics
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PSSM-Id: 381748
Aligned: 35 rows
Threshold Bit Score: 90.8445
Created: 31-Jul-2019
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 54 residues -Click on image for an interactive view with Cn3D
Feature 1:trimer interface [polypeptide binding site]
Evidence:
  • Structure:GW6: C-terminal intramolecular chaperone domain of Enterobacteria phage K1F pre-cleavage endo-n-acetylneuraminidase, trimer interface; contacts at 4A
  • Structure:4UW8: C-terminal intramolecular chaperone domain of Escherichia virus T5 pre-cleavage L-shaped tail fibre trimer interface, contacts at 4A

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1              ########   #   ## #   ######    #  #         ##########                  ##
3GUD_A          1 SDERhKTDIAPIS-DKVLDAWEKV--KFYQYKFk-DAVDEKGe------eARYHFGVIAQQIVKVFEDE-----GLSAFD 65   Bacillus phag...
3GW6_E        122 ANGErKTEPVVFD-DAFLDAWGDV--HYIMYQWl-DAVQLKGn------dARIHFGVIAQQIRDVFIAHglmdeNSTNCR 191  Enterobacteri...
NP_001120864  587 SDLRaKEHVQEVDtTEQLKRISRM--RLVHYRYkpEFAASAGie-----aTAPETGVIAQEVKEILPEA-----VKDTGD 654  Homo sapiens
NP_001286830  607 SDSRaKQEIGELDtSVQLRNLQKI--RIVRYRYmpEFAVHSGlrresdtrEIEDTGVIAQEVREVIPDA-----VQEAGS 679  fruit fly
G5EFI7        483 SDIRlKEAITEREtAEAIENLLKL--RVVDYRYkpEVADIWGld----eqQRHRTGLIAQELQAVLPDA-----VRDIGD 551  Caenorhabditi...
Q3UR85        587 SDLRaKEHVQEVDtTEQLKRISRM--RLVHYRYkpEFAASAGie-----aTAPETGVIAQEVKEILPEA-----VKDTGD 654  house mouse
NP_611893     607 SDSRaKQEIGELDtSVQLRNLQKI--RIVRYRYmpEFAVHSGlrresdtrEIEDTGVIAQEVREVIPDA-----VQEAGS 679  Drosophila me...
XP_021326266  516 SDIRaKENVKEVDtTDNLRRISQM--RLVHYQYkpEFAATVGi------dATAETGVIAQEVQQILPEA-----VKEGGD 582  Danio rerio
ECM96757      142 SDEReKQQIKSLS-DKEMKAAKSLskLFKNYKWn-SAVTEKGd------dARTHTGVIAQEILKAMSDE-----GLDATK 208  marine metage...
AAG59822      706 SDADhKYSISSIN-TKVLKAWSRV--GFKQYGL--NSEAERDl-------DSIHFGVLAQDIVAAFEAE-----GLDAIK 768  Enterobacteri...
Feature 1         ###     ## # #                                        #### #### ##### ##   
3GUD_A         66 YGL-----VGYDEWEatedeydse-------------------gnlvekgreAGNIYSIRPTECQWLEMACMRRK 116  Bacillus phage GA-1
3GW6_E        192 YAV-----LCYDKYPrmtdtvfshneivehtdeegnvttteepvytevviheEGEEWGVRPDGIFFAEAAYQRRK 261  Enterobacteria pha...
NP_001120864  655 MVFan--gKTIENFLvvnkerif----------------------menvgavKELCKLTDNLETRIDELERWSHK 705  Homo sapiens
NP_001286830  680 VVLpn--gNVIEKFLlvnkdril----------------------menigavKELCKVTCSLETRIEHLERANIG 730  fruit fly
G5EFI7        552 YLTidegrVFYETVMa-----------------------------------tQQLCRMTGDLDSKIDEKVAEISR 591  Caenorhabditis ele...
Q3UR85        655 VVFan--gKTIENFLvvnkerif----------------------menvgavKELCKLTDNLETRIDELERWSHK 705  house mouse
NP_611893     680 VVLpn--gNVIEKFLlvnkdril----------------------menigavKELCKVTCSLETRIEHLERANIG 730  Drosophila melanog...
XP_021326266  583 VVCan--gETIPNLLvvnkerif----------------------menvgavKELCKLTDNLETRIDELERWSRK 633  Danio rerio
ECM96757      209 YAF-----FTKDTWWestdsktkevvk-------------hkfkedipkdatEKERYGVRYPELFSFIFSSIESR 265  marine metagenome
AAG59822      769 YGI-----VSFEEGRygvry----------------------------sevlILEAAYTRYRLDKLEEMYATNKI 810  Enterobacteria pha...

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