Conserved Protein Domain Family
POP2

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COG5228: POP2 (this model, PSSM-Id:227553 is obsolete)
mRNA deadenylase subunit [RNA processing and modification]
Statistics
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PSSM-Id: 227553
Aligned: 3 rows
Threshold Bit Score: 477.875
Created: 7-Oct-2002
Updated: 2-Oct-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1709720  141 HLTNQSMPPIFLPPPN--YLFVRDVWKSNLYSEFAVIRQLVSQYNHVSISTEFVGTLARPIGTFRSKVDYHYQTMRANVD 218 baker's yeast
19173412   1 ----------MSDGQ------ILNVWKDNLHGEMRKISQLIGRYNYISMDTEFPGVVAKPIGSFKSSSSFAYQQLKCNVD 64  Encephalitozoon cun...
19075885   1 MNSNFSYPALGVDGISsqISPIRDVWSTNLQQEMNLIMSLIERYPVVSMDTEFPGVVARPLGVFKSSDDYHYQTLRANVD 80  fission yeast
1709720  219 FLNPIQLGLSLSDANGNKPdNGPSTWQFNFEFDPKKEIMSTESLELLRKSGINFEKHENLGIDVFEFSQLLMDSGLMMDD 298 baker's yeast
19173412  65 ILKIIQLGISLSDEQGNRP-CPISTWQFNFAFSLETDMYAQESIDLLIQARIDFKEHERRGIKVEEFGEVLMTSGLVMSE 143 Encephalitozoon cun...
19075885  81 SLKIIQIGLALSDEEGNAP-VEACTWQFNFTFNLQDDMYAPESIELLTKSGIDFKKHQEVGIEPADFAELLIGSGLVLQE 159 fission yeast
1709720  299 SVTWITYHAAYDLGFLINILMNDSMPNNKEDFEWWVHQYMPNFYDLNLVY-------KIIQEFKNP-QLQQSSQQQQQQQ 370 baker's yeast
19173412 144 DVVWVSFHSAYDFGYLIKILTCNPLPEREEDFYRLLAALFPDFYDIKFLVqnskylkKGLQEISNDlGLVRDGIQHQAGS 223 Encephalitozoon cun...
19075885 160 EVTWITFHSGYDFAYLLKAMTQIPLPAEYEEFYKILCIYFPKNYDIKYIMksvlnnsKGLQDIADDlQIHRIGPQHQAGS 239 fission yeast
1709720  371 YSLTTlADELGLPRFSIFTTTGGQSLLMLLSFCQLSKLSMHKFPNGT---DFAKYQG-------VIYGIDGDQ 433 baker's yeast
19173412 224 DALLT-SHAFFKTREVLFNRSIGRDLMCKLFGIEIKDPSL--------------------------------- 262 Encephalitozoon cuniculi
19075885 240 DALLT-ARIFFEIRSRYFDGSIDSRMLNQLYGLGSTGSVLWHNNSSTpqiQFRDLPGahpsptpSNAGIPTTL 311 fission yeast
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