Conserved Protein Domain Family
T2SSC

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pfam11356: T2SSC 
Type II secretion system protein C
This is the greater N-terminal region of GspC-type proteins. GspC proteins form part of the sophisticated transport mechanism of Gram-negative pathogens for injecting divers proteins into their hosts, a type-II secretion system - T2SS. The region is made up of a short N-terminal cytoplasmic domain that is followed by the single transmembrane helix, a Pro-rich linker, and the so-called homology region domain in the periplasm. This inner membrane GspC interacts with the outer membrane secretin GspD via periplasmic domains, an interaction which is critical for the effectiveness of type II secretion.
Statistics
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PSSM-Id: 431837
Aligned: 26 rows
Threshold Bit Score: 89.3643
Created: 24-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
jgi:DaAHT2_2255     70 LVL---IFFLAQASARLVWSFLlpa--------pePAPAITAPAATTPAVrradDrVNDGARGEKLAALHLFGQPEPQAD 138
WP_013505901        26 LLIlgvLASTSHTLARLTWTLLepvpv----ifasPKTPAPRQQAVPEAS----L-------AQNIEQLHLFGKPAPPEE 90  Desulfuri...
jgi:Tgr7_0224       26 WVTvflILLLAYALARLTWALLapaplvlpapmvaPAQVAATGSAESPAA----------SALARVAGLHLFGQAEVREE 95 
jgi:Hneap_0140      14 ALFlilLATAGVLAARITWMWLapapa----yvapPESGAEASEQSQSAS------------VEQIGSWHLFGQAATPDN 77 
jgi:Geob_0897       11 FLTfliIASLALIASDVISFRLtrl--------ypKATPKSAASVPSTMV------AEDLMSFAPILEKGLFGKAAQGKL 76 
BAN35140             1 MLT--------------------------------PKAKRMSADAALLSA---------PVAAGAVFSSHLFGRASGESS 39 
Q1GWD5              34 LLVgllGALLVWQAVRLLWVLLtpvsp---lgawqPQTAAIASA---------------AERRALFTSLDPFFRGAAQGP 95  Sphingopy...
Q2G4Y3              23 LLWwmlAGVIALLGAALFWAIVtpvsp---lgqwrPAGARIMPQ---------------TARAALFASLDPFNRTQPQAA 84  Novosphin...
zhongguo:B5T_02543  14 GRYlisLALLGVLVYLVVWTagll--------ihgPKPPERMSADGLPVTa---SaQDLALTKAEIAGWNLFGEHLSESG 82 
Q2SFB6              16 SLLliaATATVGWRGYQFWLDYnttke---ivvkaAPAAQVKQERT----------------VQQLAPLNLFGKNEPVAQ 76  Hahella c...
jgi:DaAHT2_2255    139 PEAEAaalsLAMVEAPETTL-NLTLKGLLATA--DGRRGLAVIAERRGKd-EVYGVGDTVPGNAEIEAIYPDRVLLRRAG 214
WP_013505901        91 PQSVSl--dE--VQAPETRM-RLRLEGVFLSE--VPEYSSAFIAEQSRPg-ERYTIGDRVSQGVTLAAVFADRVLLQRGE 162 Desulfuri...
jgi:Tgr7_0224       96 DAVAV----P--VDTPDTRL-NLSLKGVVAAT--PVERGLALIADERGNe-RHYAVGAELPGGATLEQVHGDRVVLRRAG 165
jgi:Hneap_0140      78 PTATK---------ISASQL-GATLEGTISGS------PLPLVMLRVGGevRLLQAGDTLSAGVRIVSIAPDRVVISNQG 141
jgi:Geob_0897       77 SPVVQq--aTATGAAPAPSLgDLILLGTAVGS---YRETFALVQKAGKEe-RVFRLGDTVFETGPLVSVGKESAEILVNG 150
BAN35140            40 APESQ----------PATFS-NLKLHGVFAAI--GSLPAFAILSVDGKPd-QPVKGGMEIAPGVVLVAVYPDYVEVRRKG 105
Q1GWD5              96 AAATV------------TSA-GLTLFGINLNE--ATGGGSAIIAGEDGVq-TSYAVGDEIAPGLKLAGVAFDHVLLDRGG 159 Sphingopy...
Q2G4Y3              85 SAAAA---------GSVTSL-ALTLFATRATP---GGGGSAIIAGADGVq-QVYRIGAEVQPGVTLAAVAFDHVELSRNG 150 Novosphin...
zhongguo:B5T_02543  83 TAKAH-------SDAPETRM-KLTLLGVFHNR--VDEHGWAIIQPEGGDa-GLYHVGDELVRGATLNALRVDHVLLKRGG 151
Q2SFB6              77 KKETE--------DLPSTNL-RLTLRGVAATNleKGESGGALIEGPDRNt-DFFRVGENMPGNATLHSVYANRVVIDRRG 146 Hahella c...
jgi:DaAHT2_2255    215 NLETLYL 221
WP_013505901       163 AYETLRF 169 Desulfurispirillum indicum
jgi:Tgr7_0224      166 RFEQLRL 172
jgi:Hneap_0140     142 RLESIAF 148
jgi:Geob_0897      151 KRLKIFS 157
BAN35140           106 VVERLNL 112
Q1GWD5             160 ARESLFL 166 Sphingopyxis alaskensis
Q2G4Y3             151 ARELLYL 157 Novosphingobium aromaticivorans DSM 12444
zhongguo:B5T_02543 152 RLEKLPL 158
Q2SFB6             147 SLENLFF 153 Hahella chejuensis KCTC 2396
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