Conserved Protein Domain Family
HTH_Tnp_IS630
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pfam01710: HTH_Tnp_IS630 
Transposase
Transposase proteins are necessary for efficient DNA transposition. This family includes insertion sequences from Synechocystis PCC 6803 three of which are characterized as homologous to bacterial IS5- and IS4- and to several members of the IS630-Tc1-mariner superfamily.
Links
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Statistics
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PSSM-Id: 279973
Aligned: 5 rows
Threshold Bit Score: 156.184
Created: 21-Aug-2024
Updated: 4-Dec-2024
Structure
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Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
P74059   1 MAYDLDLRLKVIDFIESGDGITKASRTFRVGRATIYRWLGREELAATKVETRQH---KINIKELEEDVKNNPDMLLKERA 77  Synechocystis sp. PCC...
P74627   1 MAYDLDLRIKVIVFIESGGGITKASKTFRVGRATVYRWLGREELAATKVENRQR---KINRKELEEDVKNNPDMLLKERA 77  Synechocystis sp. PCC...
P74195   1 MAYDLDLRIKVIDFIESGGGITKASKIFKVGRATIYRWLGREELGATKVETRQR---KINRKELEEDVKNNPDMLLKERA 77  Synechocystis sp. PCC...
P73980   1 MAYSLDLRQRVVAYIEAGGKITEASKIYKIGKASIYRWLNRVDLSPTKVERRHR---KLDWEALKKDVEENPDARLIDRV 77  Synechocystis sp. PCC...
Q6MDH9   1 MAYSKNLRQKAFNYLETGHSAEEVRQVFGIALRTVFNWLKRQRNGCLEDKPRKRhpiKIDNDQLKSDIKKYSDNYLKEIA 80  Candidatus Protochlam...

P74059  78 KKFGITPASLCYQFKKMKITRKKQLLYQERDVQKrAEYQKILS 120 Synechocystis sp. PCC 6803
P74627  78 KKFGVTSASLSYQFKKMKITRKKTVTLSREGCPKaSRISKNLE 120 Synechocystis sp. PCC 6803
P74195  78 KKFGVTPASLCYQFKKMKVTKKKNSYFIKREMPK-SEQNIRKS 119 Synechocystis sp. PCC 6803
P73980  78 KKFGVRPSAVYYALKKMKINRKKKNYVIEKETGR-NELSTIEC 119 Synechocystis sp. PCC 6803
Q6MDH9  81 KEFKVDPSSIFYACKRLKITLKKRPYFTKKEMRK-----TVRS 118 Candidatus Protochlamydia amoebophila UWE25
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