Conserved Protein Domain Family
RE_ApaLI

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pfam09499: RE_ApaLI 
ApaLI-like restriction endonuclease
This family includes R.ApaLI and R.XbaI restriction endonucleases. ApaLI recognizes and cleaves the sequence GTGCAC.
Statistics
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PSSM-Id: 286574
Aligned: 3 rows
Threshold Bit Score: 349.963
Created: 23-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q5WJU5         3 VVENAIRTLAETYADRLNKQVLKRVKDMESDDKSHYLIYQVLKVTLEEGEMIDVYQNKGRFLYKYAGSFLEEAAILCFEY 82  Bacillus clausi...
Q6MU56         9 VIYKKIKEIANKYSNKLNSQFQKRIVEMQNDDKSHHLIYRVLGIPYDVGNEIDYYQNQVRFLYKYAGSFLEEVTILCFKE 88  Mycoplasma myco...
WP_012256228   3 sVTDKIRSLASKYAQELQHKIETRTKELESDDQSHYLIYKVLGIQDDEGRLIDLYQNKGRFLYKYAGAFLEEATFLCFKE 82  Chloroflexus au...
Q5WJU5        83 KFGEDalKKVKIANTLGQRPKTFEIDCLVGDNAYEIKWRDATTDGDHITKEHTRMQVIKDAGYMPNRIMFYYPNRTQAIR 162 Bacillus clausi...
Q6MU56        89 KYPFA--SKTKVKNTISNIPKTFEIDCLVNNNAYEIKWRDATTDNDHIIKEHTRVKTLISYNYKPIRIMFYYPNRVNSMR 166 Mycoplasma myco...
WP_012256228  83 RFPHA--RRAQVENTSGQRPRQFHIDCLIDREAIEIKWRDATTDGDHIIKEHARIKVIKDHGFYPVRVMFFYPNREQAKR 160 Chloroflexus au...
Q5WJU5       163 IQQTLETLYHGAGGHYYYGDSAWKHIYKVTD 193 Bacillus clausii KSM-K16
Q6MU56       167 IQETLETLYKGVGGEYYYGDSAWSYVKKLQE 197 Mycoplasma mycoides subsp. mycoides SC
WP_012256228 161 IQETIKTVYQGIGGACYTGDDAWEYVRTRTG 191 Chloroflexus aurantiacus
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