Conserved Protein Domain Family
vWA_subfamily

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cd01464: vWA_subfamily 
VWA subfamily: Von Willebrand factor type A (vWA) domain was originally found in the blood coagulation protein von Willebrand factor (vWF). Typically, the vWA domain is made up of approximately 200 amino acid residues folded into a classic a/b para-rossmann type of fold. The vWA domain, since its discovery, has drawn great interest because of its widespread occurrence and its involvement in a wide variety of important cellular functions. These include basal membrane formation, cell migration, cell differentiation, adhesion, haemostasis, signaling, chromosomal stability, malignant transformation and in immune defenses In integrins these domains form heterodimers while in vWF it forms multimers. There are different interaction surfaces of this domain as seen by the various molecules it complexes with. Ligand binding in most cases is mediated by the presence of a metal ion dependent adhesion site termed as the MIDAS motif that is a characteristic feature of most, if not all A domains. Members of this subgroup have no assigned function. This subfamily is typified by the presence of a conserved MIDAS motif.
Statistics
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PSSM-Id: 238741
Aligned: 11 rows
Threshold Bit Score: 235.697
Created: 10-Jan-2006
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
metal
Feature 1:metal ion-dependent adhesion site (MIDAS)
Evidence:
  • Comment:divalent cations are bound by the MIDAS motif

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                  # # #                                                                 
NP_670881     22 MRRLPVYLLIDTSGSMRGESIHAVNVGIQAMMSALRQDPYALESVHLSIITYDn-QAREYIPLTAlENFQFTDITVPsaG 100  Yersinia pesti...
ZP_00123299   15 TRRLLTYICIDTSGSMRGEPIEAVNVGLQALLSSLRQNPYALESIHLSITTFDn-QVQKILPLTPlEQVQMPTVTCPdsG 93   Haemophilus so...
NP_404239      1 MRRLPVYLLLDTSGSMTGEPIEAVKNGVQMLLSTLRQDPYALETAYVSVITFDs-SARQAVPLTDlLNFKLPELVAN--G 77   Yersinia pesti...
ZP_00123298    1 MRRLPVYLLVDTSGSMMGEPIESVRSGLQTLVSALRQDPYALETAYLSVITFDs-SARQVTPLTDlMSFQLPSIEAS--G 77   Haemophilus so...
NP_404236      1 MRRLPIFFVLDCSESMIGENLKKMNDGLQMIINDLKKDPHALETAWISVIAFAg-VAKTIVPLVEvVSFYPPRLPIG--G 77   Yersinia pesti...
P76396        17 EPRCPCILLLDVSGSMNGRPINELNAGLVTFRDELLADPLALKRVELGIVTFG--PVHVEQPFTSaANFFPPILFAQ--G 92   Escherichia coli
NP_486862     18 EPRCPCVLLLDTSGSMQGAAIEALNQGLLSLKDELMKNSIAARRVEIAIVTFDs-HINVIQDFVTaDQFNPPILTAQ--G 94   Nostoc sp. PCC...
NP_794497     17 TARVPICLVLDVSGSMAGEPIRELQAGVNMFYQAIREDEVAQYAAEISIVTFGs-EAKRTVDFMAiERQDVPALIAE--G 93   Pseudomonas sy...
ZP_00074073  628 ENRCPIILLLDTSYSMSGEAITELNQGVKIFQASVKEDELASLRVEIAVITFNs-EIEVVQDFVTvDKFIPKTLEAS--G 704  Trichodesmium ...
ZP_00123300    1 MRRLPIFLVVDVSESMAGDSHRQMQEAINRLVQRLRCDPYALESVYISVIAFAg-AAGVIAPLTElMSFYAPRLPMG--S 77   Haemophilus so...
NP_681764     19 ERHLPVYLLLDTSSSMEGAPIESLHQGLEQFQREVSSDQFARDIVKVGVITFAsdAQLVTGGLVPiSDFQPPMLTAS--G 96   Thermosynechoc...
Feature 1         #                                      #                                       
NP_670881    101 GTFTGAALECLIHC-VDRDIQRsd-gDQKGDWRPLVFLMTDSTPSDVYAYg---eAIKEVKKra---------fGSIIAC 166  Yersinia pesti...
ZP_00123299   94 ATFMGTALEQIAIDaKNDRIENs--aTKKGDWRPILILLTDGKPSDILAFnnaipQIKALNF------------GRIVAC 159  Haemophilus so...
NP_404239     78 TTALGDALSLTAKC-IGNEVQKtt-aDTKGDWRPLVFIMTDGSPTDDWRKgl--sDFKAART------------GVVVAC 141  Yersinia pesti...
ZP_00123298   78 LTAMGEALGLLADC-VNREVNKgs-aEVKGDWKPVVFLLTDGIPTDDLQSgi--fALKNVKT------------GTFVAC 141  Haemophilus so...
NP_404236     78 GTSLGAALQELTRQ-IDTQVRKtt-eERKGDWKPVVYLLTDGRPTDDTTAei--tRWKTHYAr----------kVNLIAI 143  Yersinia pesti...
P76396        93 DTPMGAAITKALDM-VEERKREyr-aNGISYYRPWIFLITDGAPTDEWQAaa-nkVFRGEED------------KRFAFF 157  Escherichia coli
NP_486862     95 LTSMGAGIHKALDM-VQERKSLyr-aNGVAYYRPWVFMITDGEPQGELDHlveqaALRLQGDev---------nKRVAFF 163  Nostoc sp. PCC...
NP_794497     94 TTSMGQGVNLALDL-LEVRKGDyq-rAGVDYYQPWMVVMTDGEPTDDITRas--eRIREMCEsk---------kLTVFPI 160  Pseudomonas sy...
ZP_00074073  705 VTHMGKAIEKALEL-LEKRKQDyk-nSDIQYYRPWIFLITDGQPTDTWQDaa--kKIEEAETn-----------RKLLFF 769  Trichodesmium ...
ZP_00123300   78 GTSLGAALNLTMDE-IQRNVVRss-gDQKGDFKPLVYILSDGVATDDPTSai--qRWQQEFKs----------rTKLIAV 143  Haemophilus so...
NP_681764     97 VTRLDLAFTVLLES-IDRDVVRpvkgGQKGDWKPAVFVLTDGRPTDRHGIat-deLWRPARDalvnrpkgeikpSVIVAV 174  Thermosynechoc...
Feature 1                                             
NP_670881    167 AVGa-KAKHEHLKQLTSqvvalet-ldstafSGFFKW 201  Yersinia pestis KIM
ZP_00123299  160 AAGp-KADPDYLKKLTDdvvsldt-mdassfSQFFQW 194  Haemophilus somnus 129PT
NP_404239    142 AAGh-AVETKVLQEITEivlqldt-adsssiKAFFKW 176  Yersinia pestis CO92
ZP_00123298  142 AAGa-GADTEELKKITEtvvsldt-adansiKAFFKW 176  Haemophilus somnus 129PT
NP_404236    144 GLGp-SADLNILRQLTEn------------vLLFNDT 167  Yersinia pestis CO92
P76396       158 SIGvqGADMKTLAQISVrqplpl---qglqfRELFSW 191  Escherichia coli
NP_486862    164 SVGveNANMTRLNQIAVrtpl------klkgLNFIEM 194  Nostoc sp. PCC 7120
NP_794497    161 AIGt-AANLDILGMLSPgrppl-----rlkgLNFKEF 191  Pseudomonas syringae pv. tomato str. DC3000
ZP_00074073  770 AVGvrDADMETLSEISVcppk------klngLDFQSL 800  Trichodesmium erythraeum IMS101
ZP_00123300  144 GLGn-FADLSALNQIAE--------------LTFRID 165  Haemophilus somnus 129PT
NP_681764    175 GCGp-HVDDDTLKAISTgtafkmgtseaafvALFQYL 210  Thermosynechococcus elongatus BP-1

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