Conserved Protein Domain Family
ASKHA_NBD_HSP70_HscC

?
cd10235: ASKHA_NBD_HSP70_HscC 
nucleotide-binding domain (NBD) of Escherichia coli chaperone protein HscC and similar proteins
Escherichia coli HscC, also called Hsc62, or YbeW, may act as the chaperone. It has ATPase activity. It cannot be stimulated by DnaJ. Members in this subfamily belong to the heat shock protein 70 (Hsp70) family of chaperones that assist in protein folding and assembly and can direct incompetent "client" proteins towards degradation. Typically, Hsp70s have a nucleotide-binding domain (NBD) and a substrate-binding domain (SBD). The nucleotide sits in a deep cleft formed between the two lobes of the NBD. The two subdomains of each lobe change conformation between ATP-bound, ADP-bound, and nucleotide-free states. ATP binding opens up the substrate-binding site; substrate-binding increases the rate of ATP hydrolysis. Hsp70 chaperone activity is regulated by various co-chaperones: J-domain proteins and nucleotide exchange factors (NEFs). Two genes in the vicinity of the HscC gene code for potential cochaperones: J-domain containing proteins, DjlB/YbeS and DjlC/YbeV. HscC and its co-chaperone partners may play a role in the SOS DNA damage response. HscC does not appear to require a NEF.
Statistics
?
PSSM-Id: 466833
Aligned: 16 rows
Threshold Bit Score: 531.82
Created: 16-Nov-2006
Updated: 27-Apr-2023
Structure
?
Aligned Rows:
 
Feature 1:putative nucleotide binding site [chemical binding site]
Evidence:

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Feature 1            # # ##                                                                       
P77319          8 IGIDLGTTNSLIAVWKDGaaqLIPNKFGEyLTPSIISMDEn-nHILVGKPAVSRRTSHPdKTAALFKRAMGSnTNWRLGS 86   Escherichia c...
EEQ60431        4 IGIDLGTTNSLVSIWRHGraeLIPNSLGTfLTPSVVSMDKd-gTLWTGTVAREKMHTQPeRSAASFKRQMGTaHDFRLGN 82   Clostridiales...
EET44237        5 IGIDLGTTNSLIAQFHNGetrLIPNQHGHfLTPSVISVAEd-gSILTGIAARERLSTAPtLTASAFKRFMGTdKTFHLGK 83   Neisseria sic...
EFE46634        4 IGIDLGTTNSLACVWRNNkaeLIPNALGEyITPSVVSVKDd--EILVGRLAKERLITHPqDSVAAFKRDMGTaKQYTLGN 81   Erysipelotric...
KGQ11250        9 IGIDLGTSNSAVAWFSDAgaaLILGRSGErLTPSVVGLDDd-gHLLIGEAAKARLVSHPhLTVASFKRYMGTdKIFTLGP 87   Beauveria bas...
NP_308716       8 IGIDLGTTNSLIAVWKDGaaqLIPNKFGEyLTPSIISMDEn-nHILVGKPAVSRRTSHPdKTAALFKRAMGSnTNWRLGS 86   Escherichia c...
CDW58973      685 IGIDLGTTNSLIAVWKDGaaqLIPNKFGEyLTPSIISMDEn-nHILVGKPAVSRRTSHPdKTAALFKRAMGSnTNWRLGS 763  human whipworm
KAB2935310      6 IGIDLGTTNSVAAHYGPEgirFIPNETGElLTPSAVAFDErtgSYCVGRRAKNLIALDPrNGARKFKTTMGTdAQYTIRK 85   Leptonema illini
WP_151971572    7 VGIDLGTTNSAAAIFRKGkvqVLKNDLDEyLTPSVVAYDKksdSIMTGRIAKDIYAVNPnQGAATFKRNMGNdHLYSIND 86   Candidatus Ua...
WP_155173525    6 LGIDLGTTHSLVSYFDDGqpcLVSNASGQvLTPSVVSVDDd-gTILVGTSAKHRLITHPdVTVSEFKRFMGTnKTFTLGD 84   Fulvivirga ka...
Feature 1                                                                                         
P77319         87 DtFNAPELSSLVLRSLKEDAEEFLQrpIKDVVISVPAYFsDEQRKHTRLAAELAGLNAVRLINEPTAAAMAYglh--tqq 164  Escherichia c...
EEQ60431       83 HiFKAAELSSLILKQLKLDAEAYLGepVEEAVISVPAYFnDEQRFATKQAGQLAGLKVERLVNEPSAAALACrnqt-red 161  Clostridiales...
EET44237       84 RtFRAEELSALILKSLKEDAEAFLGepVCDVVLTVPAYFnAIQRQATKNAAQMAGLNVLRLLNEPTAAGLAYglqe-kpd 162  Neisseria sic...
EFE46634       82 KtFKPEELSSFILRQLIEDAKTYLQedIEEVIISVPAYFnDDQRWATKTAGALAQVKVERIINEPSAAALAQhihd-dge 160  Erysipelotric...
KGQ11250       88 QsFRAEELSALVLRKLKADAEVALGrsVTRAAITVPAYFnDSQRKAVKAAGQMAGLEVERLLNEPTAAALAYgla--dsr 165  Beauveria bas...
NP_308716      87 DtFNAPELSSLVLRSLKEDAEEFLQrpIKDVVISVPAYFsDEQRKHTRLAAELAGLNAVRLINEPTAAAMAYglh--tqq 164  Escherichia c...
CDW58973      764 DtFNAPELSSLVLRSLKEDAEEFLQrpIKDVVISVPAYFsDEQRKHTRLAAELAGLNAVRLINEPTAAAMAYglh--tqq 841  human whipworm
KAB2935310     86 DrFNSIELSSMVLKSLKADAERLFGfeVNRAVITVPAYFsEAQRQATRKAGEMAGLTVERILNEPTAAAIAYglqk-qad 164  Leptonema illini
WP_151971572   87 KkYGATELSAYILKSLKMQVETALGheVARAVITVPAYFdESQRFATIKAGEIAGFKVERIINEPTAAAIAYglnk-res 165  Candidatus Ua...
WP_155173525   85 HtFDATDLSSFVLKSLKSDAEEHLNqeINEVCISVPAYFnNKQREATKQAATLAGFTSIRLLNEPTAAALAFgvdgrqse 164  Fulvivirga ka...
Feature 1                # ##                           #                                     #  #
P77319        165 NTRSLVFDLGGGTFDVTVLEYatpVIEVHASAGDNFLGGEDFTHMLVDEVLKRadvar---ttlnESELAALYACVEAAK 241  Escherichia c...
EEQ60431      162 DSQFLVIDFGGGTLDVSVVECfeqIIEIQAVAGDNHLGGNDFDMLIAEYFCGQhaldf---esmtMSEQNLLLKKAEQCK 238  Clostridiales...
EET44237      163 DTRFLIYDLGGGTFDVSVLDYfdgVVQVSASAGDNHLGGEDFVNVLRQCFLKKcttlts-sesdkLAQNSELWQVLETAK 241  Neisseria sic...
EFE46634      161 DKTFLIIDFGGGTLDISVVDAfdnVIEIAAVAGDNHLGGEDFNTVIAEAFLREhglya---tdisVQEKAMLMKQAEICK 237  Erysipelotric...
KGQ11250      166 EQKFLVFDLGGGTFDVSIVDMfegVIEVRASSGDAWLGGDDFTEALCQWMLSHypql----tlddPTFAAELTRQAESLK 241  Beauveria bas...
NP_308716     165 NTRSLVFDLGGGTFDVTVLEYatpVIEVHASAGDNFLGGEDFTHMLVDEVLKRadvar---ttlnESELAALYACVEAAK 241  Escherichia c...
CDW58973      842 NTRSLVFDLGGGTFDVTVLEYatpVIEVHASAGDNFLGGEDFTHMLVDEVLKRadvar---ttlnESELAALYACVEAAK 918  human whipworm
KAB2935310    165 VHRFLIFDLGGGTFDVCVMEHdegILETLSVAGISQLGGEDFSHALLNYVLKKegqdfdrllsrsPETAGLMMKRAELAK 244  Leptonema illini
WP_151971572  166 ESTFLVFDLGGGTFDVCIMELfegMLEVRSTAGVSMLGGEDFTQRLMGFALQKvkvnfeyaevqfPDKLMLLRKRCEIAK 245  Candidatus Ua...
WP_155173525  165 EAHYIVLDLGGGTFDVSLLEVfngIFEIHASAGDNYLGGKDFTEAIVQHITERhrldi---atlsRQDKNKLYKAAESVK 241  Fulvivirga ka...
Feature 1         #  #                                                               ### #        
P77319        242 CSNQsplh-----irwqYQEETRECEFYEnELEDLWLPLLNRLRVPIEQALRDArlkpsQIDSLVLVGGASQMPLVQRIA 316  Escherichia c...
EEQ60431      239 RELTvsqaa---mmnylYREDELGLFLTTaDLVRICAPLFKRLEQVVFHALSDAgktmeDIDQIVLVGGTCKMPAVQQYI 315  Clostridiales...
EET44237      242 RKLGeemqt---eirfhYGDTVHSAVISReEFQEAATPLMGRLRQPLERALRDAklhpsQIDGIILVGGATRMPMIRHSI 318  Neisseria sic...
EFE46634      238 RKLSeqdev---nmkvrIHDTLLSMKLTNqQLILLGNSILTRMEGPLKQALKDAgddigDIDDIILVGGSCKMPVVQHYI 314  Erysipelotric...
KGQ11250      242 QQLSsqdra---saklvYAGEEFSWDLNEeTFHTCCGTLLSRLKKPVVQALQDAqfdvaQLDHVILVGGATRMPLVRQLV 318  Beauveria bas...
NP_308716     242 CSNQspih-----irwqYQDETRECEFYEnELEDLWLPLLNRLRVPIEQALRDArlkpsQIDSLVLVGGASQMPLVQRIA 316  Escherichia c...
CDW58973      919 CSNQsplh-----irwqYQEETRECEFYEnELEDLWLPLLNRLRVPIEQALRDArlkpsQIDSLVLVGGASQMPLVQRIA 993  human whipworm
KAB2935310    245 QQLStndtvp--laisgSPLREKTIQITReEADEVFAPLIRRLATPCQTALRGAstkisNLDAVVLVGGATRMPCVRNFI 322  Leptonema illini
WP_151971572  246 RKLSndesvevvipqmgKMKEQQTIEVTGeDCEEIFKPLLERLYSPCRAALRGAdieasELDEIILVGGATRMPIIRRFV 325  Candidatus Ua...
WP_155173525  242 YQLSeklst---gisinLSEAAFEYQLDLsTFEEICEKLLHRIKQPVIRVLSDAdlatsSITGVILVGGATRMQLFRTLT 318  Fulvivirga ka...
Feature 1                       #                
P77319        317 VRLFGklpyqsyDPSTIVALGAAIQAACRLR 347  Escherichia coli K-12
EEQ60431      316 GHFLHrepflagQPDEIIALGAGIYGGIKER 346  Clostridiales bacterium 1_7_47_FAA
EET44237      319 AQLFRriplvsvNPDEAIARGAAVQAALIAR 349  Neisseria sicca ATCC 29256
EFE46634      315 EYLTKhtvtmhlDPDKAIAYGCGTAAGIKER 345  Erysipelotrichaceae bacterium 5_2_54FAA
KGQ11250      319 TRMFGrfprnelNPDEVVALGAGVQAGLIAE 349  Beauveria bassiana D1-5
NP_308716     317 VRLFGklpyqsyDPSTIVALGAAIQAACRLR 347  Escherichia coli O157:H7 str. Sakai
CDW58973      994 VRLFGklpyqsyDPSTIVALGAAIQAACRLR 1024 human whipworm
KAB2935310    323 EDYFEtealaivDPDLTVAQGAAIQAALYTN 353  Leptonema illini
WP_151971572  326 EKILGrlpldniDPDLAVAEGAAIQAALSGE 356  Candidatus Uabimicrobium amorphum
WP_155173525  319 SRLFKsiprsdyHPDEAIAKGCAIQAALLGK 349  Fulvivirga kasyanovii

| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap