Conserved Protein Domain Family
YmfQ

?
COG3778: YmfQ 
Uncharacterized conserved protein YmfQ in lambdoid prophage, DUF2313 family [Mobilome: prophages, transposons]
Statistics
?
PSSM-Id: 442992
Aligned: 42 rows
Threshold Bit Score: 160.117
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
?
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
WP_015929093  84 TAERILPQLLALTPRGPAWGtdeagdgrgASPVMRQVWSALAAWVAEVNRVEFDLATQALPSAVSWALPDWEAELGLPDP 163
NP_274144      1 --MSYQDILRGLLPPVSYAR---------NAPRVRAQAEIDGAALDAVAESAQSVADAVDPRSAGQMLADWERVLGL-DG 68 
WP_012697457   1 -MSGHAGLLARLLPPVSYDP---------NGRHLVAGLTAEGRALDAAEASARRAAGGVTPFFAETLLPDWERVCGITPP 70 
YP_011941      1 -MTGHATLLRSLLPPVSYDP---------SGPRLAAALDAEGMTLDAALALSVRAVMGINPFRAQEWMEDWERVYGLPDP 70 
WP_011527408   1 --MSYTELLSKLLPIKSYNP---------LEKRLALSLHVEGRILDQAFADCTSVVGGLEPFKNQQWIANWERIYALPGK 69 
WP_006248670   4 INSKHGKALGGLLPPVSYDP---------NGRWLALSLEVEGRELDRIDARAKTLIDAVD-VSTGIFIDDWERVCGLTAN 73 
WP_038637869   1 --MSYFTLLNRLLPLVSYSP---------GQPLLDASLRSEAGVFDTLDTSAGLVEGGVTPFYARSLLSDWERVLDLTPA 69 
WP_061552894   1 MSKDNATLLALLLPPVAYAT---------QQPLIEAELSAEGNAFDAVNLLSESIVKAVTPIYAANLLSDWERVLGIGSN 71 
WP_089084492   1 -MAGHAELLALLLPPVSYAP---------TGSVLRAELLAEGQALDTSLTSADHIQGAITPFFAEQLLPDWERVCGITPP 70 
WP_089085458   1 --MSHATLLALLLPPQSYAR---------NAQPLQIELQAEGRALDVAERDGLQAAAAISPFFAEYTLPDWERVCGLTPP 69 
WP_015929093 164 cgtGPTGREARVAAVRARFAAQGGASPAYFICLAASIGYDITIEEPTQFLCDVSECSNDsLEetwftcdegecdstpleg 243
NP_274144     69 ---TGKNRQHRVLAVMAKLNETGGLSIPYFVRLAEAAGYQIQIDEPQPFRAGVNRAGDR-LA------------------ 126
WP_012697457  71 ---AGAPYQQRLQAVQAKLAETGGLSIPYFTRLAAGLGYRIAIDEPGPFRAGISRAEDV-LW------------------ 128
YP_011941     71 carEGRTLQERISALAVAVQEQGGISRGYFVRLAAMLGYAVTIREHVPFRAG-SRAGDA-LT------------------ 130
WP_011527408  70 yfnKKMMYQERIQLLVLAFQERSGISRDWLKRIALLVGYPITISEYRPFRAG-SQVGEK-LT------------------ 129
WP_006248670  74 ---SSLPLETRIERVIAKLNQLGGLSIGYITQVAKELGYCIKISEPQPFIAGLSRAGDM-LW------------------ 131
WP_038637869  70 ---EGATYQQRQQRVLAKLAEVGGLSIPYFTQLASNLGYIITIDEPQPFRAGVNRAGDR-LW------------------ 127
WP_061552894  72 ---ADMTYQQRLEKVLLKIAETGGLSIPYFKKLASRLGYSIEIVEPTAFHVGINRCGDR-LM------------------ 129
WP_089084492  71 ---ADAAYQQRLQAVLAKLAETGGLSIPYFTRLASSLGYTITIAELEPFRAGVSHAGDP-LY------------------ 128
WP_089085458  70 ---SGAGYQQRLQAVLAKLAATGGLSIPYFQRLASSLGYRIDIVEPQPFRAGINRAGDM-LQ------------------ 127
WP_015929093 244 yilkpdiedtdqvsdETQWKY-WVVH---VRGYGETWFYPDEGECDtDPLE-GFTtAQDLECLLHRYAPQHTRLIFAYSL 318
NP_274144    127 ---------------PQEIMWvWHVNv-rGGNNRITRFRAGISAAG-DRLT-DYS-DAVIESLFNRLKPAHTAIRFTYR- 186
WP_012697457 129 ---------------TPDILWvWLVRirgADSVRIYPFRAGVSVAS-ERLT-AFS-DPVIEAVLRDLKPAHTFVYFAYEE 190
YP_011941    131 ---------------NGDWQWaWTLQ---APAVTTHRFRAGRSAAG-EPLA-FWG-DEVLECAIRRLAPAHTVVLFAYGP 189
WP_011527408 130 ---------------NTDWLYaFTVH---ASGNISKRFRSGCSKTG-EQLS-VWG-NELLESVIEKYKPAHSVAFFAYTD 188
WP_006248670 132 ---------------HKDIMWtFFVDi-cNPTDDYKRFRASVSMAG-DALMgRYK-DPILESLLEEVKPAFSRVWVRYLG 193
WP_038637869 128 ---------------VEDIIWvWRVNi-qNSGTQSYRFRSGSSAAG-ERLT-TFG-DPVIEEVFRDLKPAHTFCYFAYQE 188
WP_061552894 130 ---------------IEGTMWtWGVVi-sGLKVKPYYFRTGSSAVG-EHLS-VFA-DAVIESVFNDLKPAHTFCYFVYQD 190
WP_089084492 129 ---------------VEDIQWvWQVVv--ASQSRSYLFRAGQSVAG-ERLT-SFG-DPVIESVIGDLKPAHTFVYFAYQG 188
WP_089085458 128 ---------------VADILWvWQVVv-hAAQVQAWRFRAGQSTAG-EALA-SFG-DPVIETVFRELKPAHTFVYFAFQE 188
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap