Conserved Protein Domain Family
AbiJ_NTD4

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pfam18863: AbiJ_NTD4 
AbiJ N-terminal domain 4
Alpha + beta. Found fused to AbiJ-like HEPN and heat repeats.
Statistics
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PSSM-Id: 465890
Aligned: 58 rows
Threshold Bit Score: 57.4425
Created: 27-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_029707311    4 DVFFRRYEKRPM--F---NAVGPKESALFVQAYRIVNEDIWKYYSWEKkv----dERVKAIWTS--LHDRLARE--IGIT 70  Rhodoferax sai...
WP_089972448    4 EYFSDRENGIKI------ANTEDIQVNVFNGIISVYFEYQNAMALKFPekddydnIKGLSKGK---FRERLLGV--IPMF 72  Clostridium ga...
DSC:DSC_10025   3 DYFSDRQNGPRA------RTEQVISPTVWAGLVATVQALINSGAFGLRfpercpdGQATCGGDAdaLAASVSAE--MPGL 74 
Q3ID91          2 EYYSDQINGAQP------RDVEIIPPNVWGGIVSIVNGLIASGAFGKYfpeecpdGQGVYATNEeaFKLSLCAE--VPDI 73  Pseudoalteromo...
Q8ZK04          5 RPYSLRHSD---------LLYEDIPLEIREQIILLIINTLGNCSSFYDmtlycyhNSHSDEVYRr-ICKTLRKE--YGLF 72  Salmonella ent...
WP_076379978    6 DIYSKTQKPPCA------AVNHSIPRVCRIQVVHILQAFCRKNGMEE--------WSDTHVWPE--VEEALLYE--HGLL 67  Filimonas lacunae
WP_084121838    5 NTYSKRNNSLPDv-----FRYDILSSKLKSQIFHIWNKYFNQECYE---------DIRPLIFKN--IYQIICEE--EGVK 66  Aquiflexum bal...
WP_050355049    3 ELYSEKLRRLENpnvydlYEYEPIPKKFRNQVIHLFDKISKICSDEFSde----fYSQSIFFEK--LNKLFCEE--KGIL 74  Gottschalkia p...
OOM72505        3 ELLSQRIRNKDGelEv--YEYDFFNDIFRNQCFYIIQDVLDKY------------DSLEGIWKI--IHDCFARE--KGVK 64 
WP_014207298    2 QLYSTRHLGSKP------RTEEDISYKLWKAIVALLEKLEQKNFFSEAypegccdDSSIVCGTD--INKLNTEIelHTDL 73  Acinetobacter ...
WP_029707311   71 ELSArhysyqtewmgkPITNSGSYdinlvVQAWMNAkcTdtmdpdaF---VKRr--LSFIELAFRereSQIDELNEklpt 145 Rhodoferax sai...
WP_089972448   73 TLNF-----------------NGW-----IGSLEEG--S-------D---FDKyalLDFIEFCWRniqDYKNGQYGllfs 118 Clostridium ga...
DSC:DSC_10025  75 AWPL--------------ETVSID-----GEGFLAE--R-------QpfaPDTllvLDFIEFVHA---SVAKPISGkyhd 123
Q3ID91         74 EYPF------------VTEETIGEgyfseKKPYSPN--------------YLSv--LDLIQFCHEhvaKPIQGSHHnffn 125 Pseudoalteromo...
Q8ZK04         73 TLYA------------HSTSYLDE-----MSNLLLK--T-------D----DKrkhIDTIELAFNyidTYLRTYEVtlgl 122 Salmonella ent...
WP_076379978   68 KLNQpd--------pyQPMYEGAGptlhnITTYMLN----------Q---MFDdrvVDIIELCFR---SIGREQLLnkrk 123 Filimonas lacunae
WP_084121838   67 NLHT-------------NSPFGMRsneveIEDYFEKt-R-------Y---VEKe--LDIIEIVFHkmtTAEDVGSRqynf 120 Aquiflexum bal...
WP_050355049   75 TLGD--------------YDDITN-----FQNYILS--A-------S---TLDv--LDLIDLSVKyieLIFYKYNWeglh 121 Gottschalkia p...
OOM72505       65 TLYS------------SSWLEKSN-----CEMYISK--S-------I---NEDf--LDFLDFIFNrfdIACRNNPPrnnn 113
WP_014207298   74 SWPLki--------tkDGEGYWQD-----KEPYIPT--------------KYEi--FNLLELLYHrtsTPENGQYHsygr 124 Acinetobacter ...
WP_029707311  146 elkqaalqdaiarakhtgmrvpgsrsdgvkaqneltnsmftsqvHELNERFKQAGMPLNY-HNG-FIQITQDALVQAQIE 223 Rhodoferax sai...
WP_089972448  119 dge----------------------------------knkikfrSEINKMFERNSIVFRLsDNG-EIERILPMQLEVLVK 163 Clostridium ga...
DSC:DSC_10025 124 ffshhhlt-------------------------fdqeagqedfrATVNRMFARNGVAFEMlPNG-RIERVLPPVLGEELK 177
Q3ID91        126 hyhlsf----------------------------dcyegkeefrNRVNRIFSRNRISYELkDTG-NIIRLAPEVLSDALN 176 Pseudoalteromo...
Q8ZK04        123 e--------------------------------------pdkaiSELNNIFHEHSLKYRY-ENG-RIVRLRRIKRLKNIC 162 Salmonella ent...
WP_076379978  124 elvy--------------------------------tyspeqavVDLNDRFQEHCIGYRF-MEG-YIIRIDNNWLYEEVA 169 Filimonas lacunae
WP_084121838  121 kpf----------------------------------yffkdavIDLNQRFRENGVGYEY-SNG-KIIRVDNKLLHRESV 164 Aquiflexum bal...
WP_050355049  122 ----------------------------------------llpiDTLNKRFKTNNLGYEI-INC-ELIKKDTQYTHEEII 159 Gottschalkia p...
OOM72505      114 lyfn---------------------------------elidmsiKELNIRFKQHNLGYEF-VNS-QIIRIDNKVLHETVI 158
WP_014207298  125 hyhlhfp---------------------------pnnnakiifsDELNNLFSATGSIYELnPSNgQIENIIGEDTRNLIR 177 Acinetobacter ...
WP_029707311  224 QPFWD 228 Rhodoferax saidenbachensis
WP_089972448  164 NYCHT 168 Clostridium gasigenes
DSC:DSC_10025 178 RTLFN 182
Q3ID91        177 TARFT 181 Pseudoalteromonas haloplanktis TAC125
Q8ZK04        163 YYLYS 167 Salmonella enterica subsp. enterica serovar Typhimurium
WP_076379978  170 KPVFL 174 Filimonas lacunae
WP_084121838  165 QETLQ 169 Aquiflexum balticum
WP_050355049  160 KPCLK 164 Gottschalkia purinilytica
OOM72505      159 KPALK 163
WP_014207298  178 DALSQ 182 Acinetobacter pittii
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