Conserved Protein Domain Family
OMP_YaiO_dom

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TIGR04390: OMP_YaiO_dom 
outer membrane protein, YaiO family
Members of this family share a domain of bacterial outer membrane beta barrel, up to the protein C-terminal residue (usually Phe or Trp). The member YaiO was shown experimentally to be localized to the outer membrane. [Unknown function, General]
Statistics
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PSSM-Id: 275183
Aligned: 24 rows
Threshold Bit Score: 138.996
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
ZP_01052475  187 IGISVSTDYYDFEGDNGrANMYYSSFsYARQTKFG-SIN--ARINYSNRFETD---NYQLEIDLYPRIA-KGLYAYVSGA 259 Polaribacter sp...
ZP_08636609   39 TEIEVSQRYEHLDSGFS-SWQAQRFDaQHHTAEGV-TWY--GTVLRERRYGSW---DEGIEAGTAVPIG-QNWFVQPEVG 110 Halomonas sp. TD01
ZP_08263291  137 WQVDAGTEYSGFSGSDQpDWNQQSVQiTRRFNANRsAAH--LRLVRYSQFGLN---DGEVELGLAGRLG-DRVSVYASLA 210 Asticcacaulis b...
ZP_09089762   77 WRLDLGSEVSDLTDGLG-DWTDSSAGlAYRLTPQT-TIS--GRTRVATRFGHT---DVQVEGRIDQAFS-PTVSAYALAA 148 Mesorhizobium a...
WP_011403034  41 WKAAARYDYDRVSGGRV-DWQRWTAVlQ-RSIPRG-TVA--ATLVRQRRFDTA---DEGITVDLWQDLW-AGAYGHLQVS 111 Salinibacter ruber
WP_012844851  25 WGLTTFYTYEALNEQHP-AWHVGYLGlQRRFARQ--TLI--ADVTTHRRFNRN---DVALGLEGWSDLW-SGAYGNLRLQ 95  Rhodothermus ma...
WP_013901663  29 DRVTLQAEHSELDKGNT-DWRELTLQlSRQWQPRE-AAE--LGLAQTRRFGLD---DTQLRLGYSRPLS-QRLTGSLQAS 100 Ramlibacter tat...
WP_012682350  55 WHLQLSTFHSSADNGYG-VWQGQDARlLYSSTRL--SPF--VSVGTQSRPNGR---QQVFGAGSYINIA-PWIYAIVGVG 125 Gemmatimonas au...
WP_012478775  25 DRVTVQLDHADYSDGFG-KRDVQTVDvAGRSGGSR-WHL--GLAHGERDYGSRrfsGNRMQGSLHHRWS-PRLSTRTAVT 99  Stenotrophomona...
WP_011422567  20 sTVELSQGAEALSGDRP-AWRTSALDlAWTGDRDR-ALAagGSLREASRF--R---QDDVEGALWAQAAvAGVVLGVEGS 92  Anaeromyxobacte...
ZP_01052475  260 FS-NSP--LNPTQRYGFELFKSLPK--S------FEASLGFRWLKFSt-----E--TIIYTGSVGWY--TGNSYWAFRT- 318 Polaribacter sp...
ZP_08636609  111 RSfDAD--FLPNWYADLRIQRLFPD--G------WLGNASIRRTQYEd----sQ--VDRLALGVERY--WGSWRGAYTL- 171 Halomonas sp. TD01
ZP_08263291  211 GSpDAD--FRPEGRMAAGGAVRMTK--S------VWLTFDGRRDRYAaa--rvT--SAAWGMRYEPH--DG-WALSSRMi 273 Asticcacaulis b...
ZP_09089762  149 ATpDAD--FLARYSIGAGASWQIVA--PakafgpFSLNIDTRYDDFAn----aD--ITTISPWVQAYvlDGRLGLSARW- 217 Mesorhizobium a...
WP_011403034 112 FGpDAQ--IRPQYSLKAEIYQPVGP---------WELLGLYEGRRYTg----sD--VHQFGAGLARY--VGAWYIRART- 171 Salinibacter ruber
WP_012844851  96 YTpEAR--FLPDVEAYVEVYQTVGA---------WELALSARPRFFPd----dT--VPTFGLALARY--EGNWYLRTRT- 155 Rhodothermus ma...
WP_013901663 101 ASpTHR--VLPKGSLGGALQYEFSP--G------WLLHGGARHTRYDa----tD--VDEGRLALERY--FGDYSLLAGW- 161 Ramlibacter tat...
WP_012682350 126 GApDNGtvLFPKIRSDASVFVAVPKlkG------VLVSTGFTDLRYTd----kRagGHIVSLGSMVY--RGRGIYNAAV- 192 Gemmatimonas au...
WP_012478775 100 ASnDDP--VFVNRQVNQDIQWKVTP--Q------TVLSVGGKYAQYHag---aH--VSGWSVGASHY--FPRVTASLRHe 162 Stenotrophomona...
WP_011422567  93 ASpTWE--FLPRWSAGARAERGLGA--G------WIASLGGRLLRYDgelgasT--VALATLGLERY--FGRWRAAASG- 157 Anaeromyxobacte...
ZP_01052475  319 YVTPGEP-GTSKSGRLIYRKYTSDADNYWTIEAGFGASPALdrfapgFSG-DEIFQ-LDSQALVLGYYFS-TKNKKNLWG 394 Polaribacter sp...
ZP_08636609  172 NISDVEGaSTPVGHAVALERYY-NDTSFIGLRANAGREEEG------LPN-GNVLT-SSVSGLGVRGRHWlDANWAIAWD 242 Halomonas sp. TD01
ZP_08263291  274 RVSPSDS-DAQTGYDLRLDGTIREGLRFY---AGLADAPE-------TVA-AVTID-TRSAFAGIAWDM--TQITTLRAG 338 Asticcacaulis b...
ZP_09089762  218 -VHAADD-IGTQADGYVLRADLAVTQRFN-VFGGYADAPE-------ISD-GTLVP-TRTVFGGVSWDV--TDPLTLRAS 283 Mesorhizobium a...
WP_011403034 172 TAAPRKS-TWAVSQRVGIRRFYYWTPSASYIDLEGGAGRSVel---vGPN-ASLLT-ARTAFASLRVQHFlTDGCALTAT 245 Salinibacter ruber
WP_012844851 156 LLTALAG-HLNWTQTFMARRYRQPPLDFIDLQAGFGRGVEIv-----DVG-PVLQA-VRTYFVAARVQRFvTRTLGLSVG 227 Rhodothermus ma...
WP_013901663 162 --TPARA-LGQDTHAFELRGSWYYAPDS-SVGVIAARGDEAt----qLGE-DRIVL-AEVRSLALLGRHRlSPQAALLWS 231 Ramlibacter tat...
WP_012682350 193 FLNEDRA-SGARSSAWQAGGQWGTQGKFW-VGGGVGSGNEAyr---lLSTtPFDAR-FKSQFVTAFASKWiTTSTGVSVR 266 Gemmatimonas au...
WP_012478775 163 RHRQSNG-PDGHGTTLSLRLKDGQGRGSTQLWLGSGTS--Gyt---aESD-PLLLReHDARRAFLRRSQPlGEHLVLDVG 235 Stenotrophomona...
WP_011422567 158 TAAGLHG-AWSGSGRLALDLYYGERAR---VGVSVAAGRELe----sLGA-GEVLR-TDVLGAAVTGVHPfSARWALTWD 227 Anaeromyxobacte...
ZP_01052475  395 FNasmFREekpfsKGDYFLYPTLGVSYAIRF 425 Polaribacter sp. MED152
ZP_08636609  243 LG---WLS-----QGDIYNRYGVQVGVRRAF 265 Halomonas sp. TD01
ZP_08263291  339 YG---RDD-----RENTYVRHGFHVTVSHRF 361 Asticcacaulis biprosthecum C19
ZP_09089762  284 LA---HEQ------RPTFDRTIFGLGLTTRF 305 Mesorhizobium amorphae CCNWGS0123
WP_011403034 246 LR---YSD-----DGPL-SRTGGALGIFVRW 267 Salinibacter ruber
WP_012844851 228 LS---YSN------DDLFTRRGLSLGLLHRW 249 Rhodothermus marinus
WP_013901663 232 LG---RTR-----QGSFYTRTGASLGLQFAF 254 Ramlibacter tataouinensis
WP_012682350 267 LD---YER-----KVDVFNRRAIGLTYFIDF 289 Gemmatimonas aurantiaca
WP_012478775 236 IGktwHRT-----RLDSFQSVQSHLGLGYHW 261 Stenotrophomonas maltophilia
WP_011422567 228 LT---AQR-----QGELYTRVGGRLGVRRSF 250 Anaeromyxobacter dehalogenans
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