5F9M,3TYX,6UUK


Conserved Protein Domain Family
LdcA

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COG1619: LdcA 
Muramoyltetrapeptide carboxypeptidase LdcA (peptidoglycan recycling) [Cell wall/membrane/envelope biogenesis]
Statistics
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PSSM-Id: 441226
Aligned: 544 rows
Threshold Bit Score: 184.168
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
5F9M_A         3 LIKPKRLQPGD-IVATVSPSWGGAgdseiR---WRYEQGVKRLEEvFGLTVVPMPNSLKGSEFIYNNPQARAEDLMTAFQ 78 
WP_011196540   5 VVKPPRLRRGD-LVGVVAPSGPVD-----Ar-rEAVEAGIRRLEA-YGFRVRTGEALWAREGVRAGARETQLADLHAMWA 76 
WP_012890935  12 VIRPPALCAGD-VVAIVSPSGGAA-----GaypRRFDRALAALRE-AGLVGKPMRNARLNRSLTSATPQERVADLHEAFA 84 
WP_013703702   5 PIRPPALHPGD-LVGVVSPSAPTA-----HhtpRRFKRSVAHLQR-LGFRVKVGPHTLNHHHHTAGTVEERLEDLHAMFA 77 
WP_014804505   3 RLFPKAW-VGTmTVGTIAPASPAP-----NnfrQRYERGIQNLKA-LGLKVIEDRRVFAKNGHVAGTVGARVRHIHDLFQ 75 
WP_014863044   1 MEKPNPATLGS-TVALVSPSSSLA-----SvanHRVDRARAFLER-VGLEVREYETTRESGSWGERRAERRAEDLMAAFR 73 
WP_023467681   1 -MKPPRLQKGD-KIAIVSPASAVA-----AyvpRRLARGIATLEK-MGFEVVLMPNATAVHSHTAGTIGERLQDLHMAFA 72 
WP_023467784 119 tltpkKLTDGS-HVRLIAPASSLS-----TvemKIIDGAIQTLES-LGLRVSISQHARAVNPFGSSDPELRVADLHAAFA 191
WP_100216209   3 MIKPKLLKPGD-TVGIISTSSPVA-----AacpNRFQRGISELES-MGFKVKIGKNALKRIGHLAGTVEERLEDLHEMFQ 75 
WP_111333049   8 MIRPPALAQGS-RLGVIATSSPIN-----TlddAVIAQGYRRLAD-LGLEVVEAPNCRKTIGHSAGTIEARVQAIHDFLR 80 
5F9M_A        79 DTRVKAIIANIGGQDSIRLLPYIDFNAIRENPKIFMGYADVTISHLFCh-kAGLSSFYGPAILTdFAEnvE-M-DPYTVE 155
WP_011196540  77 DPEVKAIFCATGGVTAITLVDGLDYDLIAQNPKPFIGMSDITLLQAAMlrrTGLVSLHASGLADgLGS--P-D-AELEAP 152
WP_012890935  85 DPEVKGIICAVGGRLSSQLLGLLDYNLIAHNPKVFCGYSDATALHVAIhtiCGLVTFYGPALMPdWGE--WpTpRPETVT 162
WP_013703702  78 DPEVKGILCTIGGHNANALLEGLDYALIQNNPKVFLGYSDITALHLGMhtqTGLVTFLGPALLPqFGE--AdGlHPYTRR 155
WP_014804505  76 NPEVGMIISAIGGFNSNQLLRHIDYDLIQRNPKILVGYSDVTNLHMAItkqTNLVTFYGPAIMPqFGD--FgGpIDFTLR 153
WP_014863044  74 DPDVDVIVPTIGGYRTSALLPHLDYDEIAANPTILTGYSDLTVLEYALlsqSELCTFHGPTAMPqLGE--YpKpFEYTID 151
WP_023467681  73 DPSIKAIISTIGGFNSHQLLDELDYELIRNNPKIFVGYSDITALFAGIyqqTGLTTFVGPALLTqFGQ--FdGlDPYTEE 150
WP_023467784 192 DPNVDAILCVRGGFSTNELVDLLDYELIRTHPKILCGFSDITALSHAIltnTGLITYSGPMLRA-FRD--R---DAYTID 265
WP_100216209  76 DHEVKAIINTIGGYNSHQLLEYIDYNLIKQNPKIILGYSDFTAILLAIhkkSELITFMGPALLPqFGE--YgGmLEYTKK 153
WP_111333049  81 DPSINAIMAFWGGHQTHQLLEYLDFDLFAAHPKPIIGYSDLTPLLNVItarTGLVTFSGPAVIs-FAK--P-TlFEYTVR 156
5F9M_A       156 MVNRTLFSNEmigEIQpapewtserlewi-einkdtrrtmqqNNG-YELLQGSt-----------------TVQGRLIGG 216
WP_011196540 153 YLLRLLTNPDppgPLpd-------------------------waGeVRPVRPGraesaghdrggasgrqdsGVRGRLVGG 207
WP_012890935 163 HFLRVVGRGVpsgPTPrfpvlvdefvsw--dsaedrlrrvdpGPA-QVALRQG------------------HATGTLLVG 221
WP_013703702 156 YLEAVLIEGRaplELEpseilihehllw--deednrprraepHPG-PKVLRPG------------------TAQGPVIAG 214
WP_014804505 154 NFKKAFQ-PipigSLPvsevfteellpw--gthdsrpkqmqpNSG-WIICHEG------------------KSEGYSLVA 211
WP_014863044 152 HFFDAISGQLa-gTIEpsefwtdefldwferrdlerrrklhdNNG-YEWLRKG------------------SARGRLLGG 211
WP_023467681 151 SFKRTFMQTEpigRIEaseewtdevlrw--dvaddrrrehqvNAG-YTIVKTG------------------VAEGPILTG 209
WP_023467784 266 YFKQVLFGTEp-vTIKpsvhwrdtd---------rghiitlpNKG-PILLSNG------------------QASGRLLGG 316
WP_100216209 154 IFKDVLMTQNdeiRIPpskywtseflaw--diednrprqltkNEG-PLIIKEG------------------RARGSILAG 212
WP_111333049 157 GLQRVLFEGGdvlDFEpaeiistnlwy----ehpdlrmverpSDG-WKTYVPG------------------RARGRLFGG 213
5F9M_A       217 CIEVLEFAKGTELWPEkkhWEDSILFFETS-EDHP--EpsYIKYWLRNYAAQGILQKAKGIIFGKPKDEMyyeeYK-HEI 292
WP_011196540 208 CCNCVLHLLGTSYWPD---TEGAILFLEGV-NLLT--S--AVLRGLAQLRLAGALDGVKAILFGHMEGCFrdrpsPlEGM 279
WP_012890935 222 CLPVLRELAGTPWQPRf---AGRILVLETP-QLPYnmE--QATSDLWHLRNMGVFKEIEALAIGRPYSr----dQA-AAL 290
WP_013703702 215 NLGTMLALCGTPFFPN---LEGAILCVEEDeTESP--A--SVDRFLTQLRLMGAFAKIRALLVGRFHPKVgf-gPE-DPL 285
WP_014804505 212 NLTTLMMTIATRWEPI---WQDKVLFLEEE-GQST--Q--ITDRCLTHLENIGVFEKIKGIVFGRSYGYKvv-dSK-YPL 281
WP_014863044 212 HAYSLLHVIGTDYWPD---HNGSILVLEET-MEESslR--EIESYFIDLRNAGLFEQIEGLVVGRFKQYDse--eS-KRF 282
WP_023467681 210 NTGTLLLLAGTPYLPS---FDGVVLMLEDDeSETP--E--TIDRYFTQLRHMGAYDKIAALVVGRFPRKVdf-dPD-FPL 280
WP_023467784 317 NLCTLNLLQGTPHFPD---LRDTILFLEDD-YEVHp-A--TFARDFASLMAQPGAETIRGIVFGRFQLTTkm--tE-EHL 386
WP_100216209 213 NMGTMLLLAGTEFLPT---FDNKILFLEEDeQENP--G--TIDRYLTQLRHMGVFEKINGIVVGRFHPKVef-sQD-YTF 283
WP_111333049 214 NIGSLLLLAGTPYWPD---LDGAILFAEEDeGESP--E--TVDRLFTRLRHMGVFDQIEGLVIGRFADSVef-tEE-DSF 284
5F9M_A       293 LQVMKEH-NLEDLPILYNLNFGHTEPKFILPYGSMAEIDCENG-SFSIL--E 340
WP_011196540 280 ALAVTEAlGDLDLPVYQTEAFGHCVPNVTLPIGAVACIRDGRLv-Le----E 326
WP_012890935 291 RAAVLEVvAPYSFPVLAELPCGHSSPILTLPLGIAATVSGDEL-VVRQN--A 339
WP_013703702 286 EAVLLRAtAGYDLPVAYGFDFGHTDPMFTLPIGTQARVAFGTEaRVWLL--E 335
WP_014804505 282 KRILRRFgRRYKIPVIANVDFGHSDPVLTLPQLIHVKVDTAKQ-DVAFT--E 330
WP_014863044 283 RKIIQLVtEGYDFPILYGVDVSHTDPQLTLPYGVEAELDSEEG-NFRLL--E 331
WP_023467681 281 KDIILRAtRGYDFPIILDADFGHTDPVTTLANGVQIRVEATDSvTLDVL--E 330
WP_023467784 387 RYLISLYpFLEHVPVLANVDFGHTSPLFTFPIGGQVELHDEVI-RLHIS--- 434
WP_100216209 284 IDIICQAtKGYDFPIVYNVDFGHTDPMMTIPNGIDVEVEASNN-NVNILfcE 334
WP_111333049 285 TAILDTAlRGYAIPTIYDVDFGHTDPLMTIPIGVEAELDATGK-YFRLC--Q 333
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