1FOV,3GRX


Conserved Protein Domain Family
GRX_GRXb_1_3_like

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cd03418: GRX_GRXb_1_3_like 
Click on image for an interactive view with Cn3D
Glutaredoxin (GRX) family, GRX bacterial class 1 and 3 (b_1_3)-like subfamily; composed of bacterial GRXs, approximately 10 kDa in size, and proteins containing a GRX or GRX-like domain. GRX is a glutathione (GSH) dependent reductase, catalyzing the disulfide reduction of target proteins such as ribonucleotide reductase. It contains a redox active CXXC motif in a TRX fold and uses a similar dithiol mechanism employed by TRXs for intramolecular disulfide bond reduction of protein substrates. Unlike TRX, GRX has preference for mixed GSH disulfide substrates, in which it uses a monothiol mechanism where only the N-terminal cysteine is required. The flow of reducing equivalents in the GRX system goes from NADPH -> GSH reductase -> GSH -> GRX -> protein substrates. By altering the redox state of target proteins, GRX is involved in many cellular functions including DNA synthesis, signal transduction and the defense against oxidative stress. Different classes are known including E. coli GRX1 and GRX3, which are members of this subfamily.
Statistics
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PSSM-Id: 239510
Aligned: 32 rows
Threshold Bit Score: 104.593
Created: 16-Nov-2005
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
GSH bindingcatalytic
Conserved site includes 7 residues -Click on image for an interactive view with Cn3D
Feature 1:GSH binding site [chemical binding site]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1             #  ###                                       #       ##                   
1FOV_A        2 NVEIYTKETCPYCHRAKALLSSKGv---SFQELPIDgn-aAKREEMIKRSGRT------TVPQIFIDAQHIGGYDDLYAL 71  Escherichia coli
3GRX          2 NVEIYTKETCPYSHRAKALLSSKGv---SFQELPIDgn-aAKREEMIKRSGRT------TVPQIFIDAQHIGGYDDLYAL 71  Escherichia coli
Q9ZDW1        8 TIIIYTLASCPYCIKAKALLDKKNv---IYEEIEVSnltqEEKEKFIKKSGGKs-----TVPQIFIDNMHVGGCDDLFNL 79  Rickettsia prowa...
NP_820503     3 KIEIYTTARCPYCVRAKALLDRKGl---DYMEIRIDea-pEKRDEMLSRSEGRr-----TVPQIFINGRGIGGFDELWEL 73  Coxiella burneti...
NP_966514     3 NVVIYVKKGCPYCIRGKDLLDKKGv---KYEEIDVLkn-sDLFNDIKSKYNVR------TVPQIFINDKHIGGCDKLMDL 72  Wolbachia endosy...
YP_047635     4 NITIYSTTVCPYCIRAKQLLERKGv---KYKEINLSneapEVRVELMQRTHHR------TVPQIFINDQFIGGFDQLYAL 74  Acinetobacter sp...
ZP_00335717   3 AVKVYSTGTCPICVKAKAFLDKRGi---GYDEVRIDldreAMKEFSVVTNGAR------TVPQIVVDGTCIGGFTELTEL 73  Thiobacillus den...
YP_096316     3 EVILYTTGYCPYCIKAKELLDRKKv---IYTEIRVDlq-pELREEMIQKSGRR------TVPQIFINGQAIGGCDDLYAL 72  Legionella pneum...
YP_169561     3 EVRIYTKTNCPFCDLAKSWFGANDipftQISLDDDVk--rAEFYAEVNKNILLveehirTVPQIFVGDVHIGGYDNLMAR 80  Francisella tula...
YP_180677    17 KVIIYTKDFCSYCTKAKALFNRKNi---PFEEINITgn-sTLKDEMIQKSNGMk-----TLPQIFINDVHIGGCDDLYRL 87  Ehrlichia rumina...
Feature 1           
1FOV_A       72 DARG 75  Escherichia coli
3GRX         72 DARG 75  Escherichia coli
Q9ZDW1       80 EKEG 83  Rickettsia prowazekii
NP_820503    74 EQSK 77  Coxiella burnetii RSA 493
NP_966514    73 EKEG 76  Wolbachia endosymbiont of Drosophila melanogaster
YP_047635    75 ERDG 78  Acinetobacter sp. ADP1
ZP_00335717  74 DMDG 77  Thiobacillus denitrificans ATCC 25259
YP_096316    73 EAQG 76  Legionella pneumophila subsp. pneumophila str. Philadelphia 1
YP_169561    81 AGEV 84  Francisella tularensis subsp. tularensis SCHU S4
YP_180677    88 YESG 91  Ehrlichia ruminantium str. Welgevonden

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