Conserved Protein Domain Family
ExoIX

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COG0258: ExoIX 
5'-3' exonuclease Xni/ExoIX (flap endonuclease) [Replication, recombination and repair]
Statistics
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PSSM-Id: 440028
Aligned: 836 rows
Threshold Bit Score: 139.779
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_013279745   43 NEKFILIDGSSMLVTNYYGnL--PkallfekdpekkeklysQiLHNDKGQYTNAIYGMMRTILKIIAEQKPTHMMFAFDM 120 
WP_085756503    2 PDKFYLIDGHALIYSSYFApM--Rt----------------N-LSSPKGEPTKASYIFTTTLLGLINRKNPDMLAVAMDS 62  
WP_012861468    1 MPKAVILDTSAIMYRTHFA-L--M-----------------G-MRNSKGKATGATYGFINTLNLIIKEFSPDYLVACLDV 59  
WP_013387319    1 MKRAVLLDVSAIMYRAFFA-H--M-----------------N-FK-TKNEPTGAVFGFTNTLLSIIDEFSPDYIGAAFDV 58  
WP_012507449   27 KPALFLLDGMAIVYRSFYA-LqrT-----------------G-MTSQEGMPTGAIYGFASTLLKIFETYRPQYLAAVFDS 87  
WP_014560391    3 NKLFVIIDAMALAYKAYFA-FisR-----------------P-LSTKKGEPTSAVYGFMTQLLKVLENHKPDYIAVAFDS 63  
WP_014857234    3 RKKFVIIDAMSLAYKGYYA-FisR-----------------P-LYTSKGEPTSAVYGFLSQLFKILEDTKPDYVAIAFDS 63  
NP_662550      34 KPGLFLLDGMALVYRAFYA-LqqA-----------------R-MSTRDGVPTGAVFGFATSLLRIIEEYRPDYLAVAFDS 94  
WP_015769061    1 MKRAVILDTSAIMYRSHFA-L--M-----------------G-MRNSSGMSTGATFGFINTLESVIREFRPDYLVACLDV 59  
WP_012859111    1 MKKILILDTSAIMYRAYFA-L--M-----------------N-FRNSNGEPVGAMLGFIKQLELALSYFSPEYVIAAKDV 59  
WP_013279745  121 TRDTF-RREKYPDYKGNRGETPEPLKEQFENMEKLLLEMGFQVFFDNKFEADDIVGSVVTKFEKE----IPSFIITKDHD 195 
WP_085756503   63 KEKSF-RSDIFPEYKAQRPPMPEDMPQQIDRIEQILEAMKIPILRVEKYEADDIIGTLAEKAAKEg---IETYICSGDKD 138 
WP_012861468   60 KRSELkRTSELTEYKAHREDMPEELVYQIPKIMEVLDAYNIPKYKVDGYEADDVIATLAKKFSDDn---NEVFIVTGDKD 136 
WP_013387319   59 KRSTLkRSEKYKDYKSARKPIPEDLVTQIPRIEDLLDCFGIEKFKIDGHEADDVIGALAKKLSADn---IEVYIITGDKD 135 
WP_012507449   88 KEKTF-RHDLYPLYKANRQAPPEDLIMQLDAIFKLLEAFDIPLIKTPGYEADDLIGTASRKFSPM----CQVYIVTPDKD 162 
WP_014560391   64 KEKTF-RHEKYEAYKSSREEMPEDMVPQLERIKQIIASLKMPVYILPGYEADDIIGTAVKKAEKLg---LESLAITPDKD 139 
WP_014857234   64 KEKTF-RHDRYENYKSSREEMPEEMVPQIARIKEIIEAFNIPIYILPGYEADDLIGTAVRKAAEAg---LTAYAITPDKD 139 
NP_662550      95 PEKTF-RHEKYKAYKANRPAPPDDLINQLDNIRELIRACGIPLIIMPGFEADDLIGTTARKFEAd----CQVFIVTPDKD 169 
WP_015769061   60 KRDELeRTGELETYKAHRESMPEELVMQIDTIMKVLDGYRIPKYKKAGQEADDVIATFATKFSNDadeqIEVFVITGDKD 139 
WP_012859111   60 KRAELkRREIYKEYKENRSGMPDELVMQLDAIDGILEGYGIPIIKIPSYEADDVIASISKKYSKd----YEIIILTGDKD 135 
WP_013279745  196 YLQLVSDYTRVWLIQTKqetadellnkygaeygwnsklaaipdkAfEV-TPPLCLSEYGVKPEQIPDLKGIQGDTSDNIP 274 
WP_085756503  139 MLQLIEENVFVHDIKKD---------------------------S-VK-DLNWLETEKQMSPAQFLDALALMGDTADNIP 189 
WP_012861468  137 LMQLIKDNINIALLGKGdgk---------------------sqfK-YIqTEQDVVEYLGVRPDQVIDLFGLMGDKSDGIP 194 
WP_013387319  136 LSQLVDDNINIALLGKGegk---------------------erfK-ILrTEEDVVEQLGVKPNDIPDLFGLIGDASDGIP 193 
WP_012507449  163 LAQLVHEGVNILKPGKNqn-----------------------elE-LL-GKKEIIEQFGVPPELFIPFLTLTGDTSDNIP 217 
WP_014560391  140 YFQLITDKIKIVRPGKSnd-----------------------evI-IY-DKKKVIDELGFEPKYMIDYLALVGDSSDDIP 194 
WP_014857234  140 YVQLINDSVKVIKPGKStd-----------------------eiV-VI-DEKKVEEEYGIKPSQMVDYLALVGDSSDDIP 194 
NP_662550     170 MSQLVHDGVRILKPGKKqn-----------------------efE-LL-GSREVAEQFGAPPEQFIDLLTLTGDTSDNIP 224 
WP_015769061  140 LTQLVDGKINIALLGKGdkn---------------------safK-HIkTDEDVVEYLGVTPDKIPDLFGLMGDKSDGIP 197 
WP_012859111  136 LAQLINPNTSIALLGKKden---------------------epyK-IIeNDEDVIEYLGVKSYQIKDLFGLIGDSSDGIP 193 
WP_013279745  275 GVKGVS-SAAIPLLAEYGTIEKIYEAIDECGgdakalkalgahwkedlgisRSPMKALTEYRDMAFLSKELAQIRRDYDT 353 
WP_085756503  190 GVPDVGpKTAEQWIRKYGSLEKLYENAGEIK--------------------GKRGNSLRESKEQAMLSRELVEIKRDCPV 249 
WP_012861468  195 GIQGIGpKTGVELISKYGNLETLYENIEEIK--------------------GKRKEKLENEKENAFLSRELATVHMDLDV 254 
WP_013387319  194 GVRKIGsKKALVMLQKYKNLEGVYNHIDELSdlp--------------gigKGLVKNIEEDKDLAFLSRDLATIDLEIPV 259 
WP_012507449  218 GAKGIGpKTAISLLDQYGSLQNIYNHLDTIS--------------------PKNRQSLEAFQPTLDLITQLVTIRTDLQI 277 
WP_014560391  195 GVPGIGpKTAVPLIQQFGTIENIYNNIDKIEk-------------------ESIRKKLIENKEKAFLSKELATIHTEVPL 255 
WP_014857234  195 GVAGIGpKTAAPLIRKFGSLEKIYENLDKIDk-------------------PSVVKKLIENKENAFLSKELATIKTDVPF 255 
NP_662550     225 GAKGIGpKTASSLLKKYGSLEGIYANIDALT--------------------PKTRQSLEAFREMMPLVRELVTIRTDLDL 284 
WP_015769061  198 GVAGIGpKNGVKLITTYGNLEGIYENIDEIK--------------------GKQKEKLLTDKENAFISRELATVKRELDV 257 
WP_012859111  194 GVLGIGpKTGAKLIAEYDNIDNIYANIDNIK--------------------GALQKKIIASKDLAYISRELATVFDELDI 253 
WP_013279745  354 GKTLEDFRIN-INKDRAKELFLEYGFKSLIEKL 385 
WP_085756503  250 ELRPKAFRLSeFDYDRLAEIFYELGFQRLYKSV 282 
WP_012861468  255 EYNKEKLKYEeKNMDKLIPLYKEMEFKRFLEDA 287 
WP_013387319  260 DYDPHKLQ-HgIEKNRLYNLFKNLEFKALIKKL 291 
WP_012507449  278 DVTLKELACGlPDPAKLFPLLQKLGLKTISSRI 310 
WP_014560391  256 DFDFEKAKFEkPDFETLRQIFIELEFKSLYSKL 288 
WP_014857234  256 DFNLEDARFTkPDFNKLMKIFGELEFRSFADKL 288 
NP_662550     285 PLTLEALHASkPDPEALFALLAKLELKSIAARL 317 
WP_015769061  258 EYDKNKLKFEeKDFDSLLKLYEELNFKRFSKAV 290 
WP_012859111  254 DLNIEDAKIKeKDFDKLSEIYLKYELRKEYEKL 286 
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