Conserved Protein Domain Family
spore_yqfD

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TIGR02876: spore_yqfD 
sporulation protein YqfD
YqfD is part of the sigma-E regulon in the sporulation program of endospore-forming Gram-positive bacteria. Mutation results in a sporulation defect in Bacillus subtilis. Members are found in all currently known endospore-forming bacteria, including the genera Bacillus, Symbiobacterium, Carboxydothermus, Clostridium, and Thermoanaerobacter. [Cellular processes, Sporulation and germination]
Statistics
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PSSM-Id: 274335
Aligned: 9 rows
Threshold Bit Score: 407.5
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
BAC13912         5 YGKRIRGYVTVRVSGEKPELFFQKCANEGILVWDAKKISSKDCVAKLKLQDIKKLKQLRRRTLYKISFEERKGLPFGFAR 84  Oceanobacillu...
BAB81726         3 LEFLKKGQVKVEIKTFDINKLLNVLWRNGINVENVRKIDVVTLTLNVDYSDYGKLKTYVKRLNGKVKIISSKGMIFFLSR 82  Clostridium p...
AAK79262         5 FESFKNTYVVVEVRTANIEKFINLLWRNKIEVMSMIRVNANLIRFKVALKNYRKTIKLVKAVKGKIKVIERHGTGFLFFR 84  Clostridium a...
AAM24224        11 LWNFLRGYVIIKVEGLAIEKFLNLVMVNEVYIWDVERKNYTTLTAKVSTKAFKEVLQYAKKTGCSVFIVSKNGLPFVIFR 90  Caldanaerobac...
tigr:CHY_0424    1 MLKWLFGEIHFKFQGSEVERFLNLAFSRQVDLREVKY-TRDGLTFKTSLKNFRQVKTIGKKVGGKTKVIAKEGAWFWWKK 79  Carboxydother...
tigr:GBAA_4530   5 WFIKWLGYVKVRIEGRGAERFVNECVRRKLLVWDVKKIADETLVFCMLLRDVKKIKPIYRKNECKLYFIGRYGFPFWNKR 84  Bacillus anth...
BAD76779         5 WVDTLAGSVRVKARGKGIERLINACVRQGIAVWNVKKHSADTATFFIKLSDVKRLRHVARQSECKLSFVGRTGLPFFWRQ 84  Geobacillus k...
BAD39513         5 LVRYLLGTLRIEVTGGDIERFLNGCLEEGILLWDLRR-TPERLHATMMLADFFQLRPVARAGRCRVRIRARHGLPFLTRR 83  Symbiobacteri...
WP_012047998     3 FDKYKNANITIEIQSMIPERFINLLWKNGVKVENVVKTNVTTFILDIDLKDYAVMENIARRTGTKVKIVKRKGISFLILF 82  Clostridium b...
BAC13912        85 FLKKRFLVIGILVGVLFFLFLSNLLWSVN--ITGVPKEIEEKIKVQLDSYGIHSGVWLFSVDsPKDIQRNLLDDVPELLW 162 Oceanobacillu...
BAB81726        83 AKKSISIFVGVLIFLVGLYIYSGFIWRID--IETKKNIAPFEIRTMLNDFDIKPGVKKSSVN-VYGLERKLENGHGDIMW 159 Clostridium p...
AAK79262        85 IRNRLSILVGIAAFIACVFYLSTFIWQID--IVTEKNIAPYDVRQDLREIGVQPGMKKSSLD-VYKIEEKLMQKNNNIMW 161 Clostridium a...
AAM24224        91 LRKRKGIVLGFLLSVLLVYLFSTFIWEID--VKTVNGLKEEEVAKKLSEMGLKSGVSKFKID-INKLEKEFLLNNEEVAW 167 Caldanaerobac...
tigr:CHY_0424   80 VLKRPGIIAGLFLLLGIIYSLTGFIWFIE--IDGFSG-RQREILDILKARKVKPFVRKKAVD-EKMLKREILAQMPEISW 155 Carboxydother...
tigr:GBAA_4530  85 LIKNSGFLIGFLIFFFGMIALSNMVWKIE--ITGAKPETEYILMKELDKMGIKKGKLQFQMPsVEDVQRHLTDNINAITW 162 Bacillus anth...
BAD76779        85 AWRNSGFWLGLLLFIAIVFLLSNIVWKIE--IKGAAPETEHQIARELKRMGVERGVFQFLLDdPETLQKKLTERVPDITW 162 Geobacillus k...
BAD39513        84 LRRRPFLLAGALGGLAALVWAGSHLWVVDvrINGPGYLDPRAILAVAAEAGLRQGAWKARID-LDHVTQHLKSRVEELSW 162 Symbiobacteri...
WP_012047998    83 LKRRFSLVIGIFIFSFIIYFMSTFIWDID--ITSTNGVTPYEIRQQLKKYGIKPGINKNTID-VYKIEEKLIKDIDNIMW 159 Clostridium b...
BAC13912       163 AGVELRGTTLYLEGVEKLIV--EE-LDPGEPGNIVAAKEGVITRMYVSKGEPVKQINDYVKPGDLLVSGDL-----SYEE 234 Oceanobacillu...
BAB81726       160 VNARIEGGTLKIKVEEKVSPkiKEeNENKEFKNIVASMDGEIKRIYTTSGTAVVKEGDVVKKGDILIIPQQ-----GIEG 234 Clostridium p...
AAK79262       162 ARVRVYGSKLKVKIVERQEI--PDvKPNNEARDVLAKKSGQILRVYTTSGTAIVKAGDVVKKGQVLIKGEA-----GQDD 234 Clostridium a...
AAM24224       168 IGINVRGTKAFVKVVGKTKP--QKvLSKEEPCNIIAKRDGIIYKMTVLEGEAVKKVGDTVKTGDILISGII-----EKPG 240 Caldanaerobac...
tigr:CHY_0424  156 VGIEKKGVRLIITGKMRQEY--RQkYKKA---DIVAKRDGIIKEILVFRGSLRVKPGQKVTAGEVLIS--------GVDE 222 Carboxydother...
tigr:GBAA_4530 163 AGLEIRGTTYHFKIVEKNEP--KK-EKEQKPQNLVAKKEAIVTKTFVEVGKPVVLKNDHVEKGQLLVSGIY-----GNEE 234 Bacillus anth...
BAD76779       163 VGVEWKGTSLHFRVVEKEIP--EP-KKPIPPRHLVAKKEAVIADLFVEEGQPLVSVNDYVQKGQLLVSGII-----GAEG 234 Geobacillus k...
BAD39513       163 AVVRVDGTRAVIEVVEKGAV--TP-PDQAQCVHLVARKAGVVEQVIPLQGEPLVKKGDVVQPGEMLVECALrywagGRPV 239 Symbiobacteri...
WP_012047998   160 VKARIEGGKLVVKAEERQSP--PTiVKEDEPCNLVAKKDGEVQRVYTTSGSAIVQNGDIVKKGDILIKGEQ-----GKEG 232 Clostridium b...
BAC13912       235 nqdedesdsekrKTPPITAEAEIFANTWYEVTLTVPLSYNYEQLTGKSKNKYYMKMGQLQLPIWgFRDPEFEQTQVELNE 314 Oceanobacillu...
BAB81726       235 ------------GEYEVDAEGEVTANTFYEKTIELQVQGKKEERTGEVDSDIYLEIMGKKIYLK-KPTKEFDKYDKIEST 301 Clostridium p...
AAK79262       235 ------------KVYKVHADGSIIAKTFNENIAKVMLTTHIRKRTGKKVQNYYVRIGNKKFYLK-KSENKFNKYDKIVDD 301 Clostridium a...
AAM24224       241 l-----------DTMFVHADGEVLARTWYEISVEEELKRTRWVKTGEKIVATKIIIGSNTITFT-SRKIEFEKFKKEEKN 308 Caldanaerobac...
tigr:CHY_0424  223 ------------RGKTIVAEGTVKAVTWYKKKVQVPLREERLVPTGQESSLVKLFFGKKEITLK-KPPKSFALAIMVEKR 289 Carboxydother...
tigr:GBAA_4530 235 ------------SPTIVSAKGIVYGETWYTSEVNVPLKTQFQVYTGNTYNEHYLKFGSAKIKIWgFQHDKYKRSRTENVK 302 Bacillus anth...
BAD76779       235 ------------RTKFVPASGKVFGETWYKSTVVLPLETTFHVLTGKFTERHYVGIGRLLIPVWgWKKPVFAHTIVETEK 302 Geobacillus k...
BAD39513       240 vipgtpppprtdLARTVVAQAAVKARVAYRQYYEYPAVEQVKEPTGRRHVQWVLNWNGRSIILRgRGPVPFAEYEVTTRT 319 Symbiobacteri...
WP_012047998   233 ------------ETYEVHSEGKVFARTFYEEIKTINTYRIKRKRTGKKIDRIYINFKGKKLYLK-KTINKFEKYDRIENN 299 Clostridium b...
BAC13912       315 KPIqflkw-qlpisIIESEINEKQLYEGERTKEEAIDAGKKQAVKQLETELGPDAEILSE-KVLHERIEHGKVKLIVYVS 392 Oceanobacillu...
BAB81726       302 GKF-----------INRNLYYEKIDKDIVDDKETIINKAVELMKNSINKEISKQSKIVDN-IITTEDLGEGKIRLKVLFV 369 Clostridium p...
AAK79262       302 KCF-----------GGRETYYEVDDKVVKKDKDAIVKETANKMYDKMKENYDMNIKVLD--KIVDSNVEGNICTVRLVVV 368 Clostridium a...
AAM24224       309 LIPyea-----pfkIVKEVYYEVKPEVETVPIKEAKEKGRKKALEELEKVISPGGKVVNK-KEKYEVIDGRILRVTVMAE 382 Caldanaerobac...
tigr:CHY_0424  290 YKLslgrkfavpieLYKVTYKEVKRKVRKLTLEEGAQKAYNLALEELKKEVDMKQITYMD---KSVRSLGDAVEVVVKAQ 366 Carboxydother...
tigr:GBAA_4530 303 HDVklfdf-tlpiaYEKDIVREEEEANREYTEKQAMKVAKEMAEKELKKKLDEHAMIVSD-KILSKEVEADQLKVTLHYT 380 Bacillus anth...
BAD76779       303 RPFrfwkw-dlplyYERITIREAEEVKRRYTWEEAFAEAKEIARRELRAKLPEEAAIRSE-KVLHQAKENGKVRVELHYE 380 Geobacillus k...
BAD39513       320 LAPgqwrnwsppveIVIREALEVSTRAEPVPVEVLTERARAAMERRLAWILGPNDRVLTPlRAEVVQQDGGYVGILVTVE 399 Symbiobacteri...
WP_012047998   300 KLF-----------ITKETLYEVKETKENINLKKAIDEENEKIYKNITKNLDKSVKIVD--KITEYSPEGESCKIRMLII 366 Clostridium b...
BAC13912       393 VEENIVK 399 Oceanobacillus iheyensis HTE831
BAB81726       370 VEQNIAL 376 Clostridium perfringens str. 13
AAK79262       369 CEEDIAD 375 Clostridium acetobutylicum ATCC 824
AAM24224       383 VLEDIGV 389 Caldanaerobacter subterraneus subsp. tengcongensis MB4
tigr:CHY_0424  367 ALEDIGQ 373 Carboxydothermus hydrogenoformans Z-2901
tigr:GBAA_4530 381 VIENIAE 387 Bacillus anthracis str. 'Ames Ancestor'
BAD76779       381 VIENIAV 387 Geobacillus kaustophilus HTA426
BAD39513       400 TLEEVSA 406 Symbiobacterium thermophilum IAM 14863
WP_012047998   367 AEEDIAV 373 Clostridium botulinum
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