Conserved Protein Domain Family
Phage_antitermQ

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pfam06530: Phage_antitermQ 
Phage antitermination protein Q
This family consists of several phage antitermination protein Q and related bacterial sequences. Antiterminator proteins control gene expression by recognising control signals near the promoter and preventing transcriptional termination which would otherwise occur at sites that may be a long way downstream.
Statistics
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PSSM-Id: 428991
Aligned: 24 rows
Threshold Bit Score: 141.999
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_038241585   1 MRDIQQVLVLWGGWTTSDvNLK-VGWSPVAAGFSGLLPASGTSRPTCSDEDGLIIDICVARLRARGrEEEFDYIKQHYML 79  Xenorhabdus sze...
ACQ68276       2 RRDIQQVLERWGTWTRDN-NAG-IDWSPIAAGFKGLLPLRPSMRPSCSDEDGLIIDNCVSQLQKVRqPEELSLIIAYYVK 79 
KMV67193       2 RRNMQEVLERWGRWAASEeYCSlVDWPAMSVTPG---RKHEAGKPGCSDEDGLAIDTCVAHMSMVRhAEDILILGQRFIG 78 
KKF37051       2 RRDMQEVLERWGRWAASEeYCSlIDWPSLSVTPGGFLRR--SSRPGCSDEDGAAIDTCVAHMSLVRdAKDILILGQRFIG 79 
EQB99554       1 MRNIQQVLERWGGWVDD--ATG-VNWPPIAAGFKGLITSTRPLRPSCCDNDGLIIDACIAKLQTVDkSEEIEVLFMYYAL 77 
WP_042395526   1 MRNIQQVLERWGGWAAQH-NTA-VSWSPIAAGFKGLIGASFSSRLSCSDDDGLIIDSCISRLQQIRkSEELNAIMLHYVH 78  Pseudescherichi...
Q7MZ44         2 QRDIQKILLHWGGWVVHG-RSG-LGWSSVTAGFKGLVSRTSITKLSCCDEDGLIIDGCIAKLRNVQmEQECDFIECHYAK 79  Photorhabdus la...
CCH:MU9_1880   2 SRDIQTILLHWGGWAAGGhCAG-MGWARVSSGFRELAQNSSKQRPSCSDEDGRVIDRCVSMLGTAGlERERDYITDYYVK 80 
WP_038238270   1 MRDMRMILNQWGAWVCEG-KSP-VDWPSVAAGFKRLLPRNRRMRSPCCDDDGMALDAAVLRLKQHD-PYLFQLIVLHYIK 77  Xenorhabdus sze...
KYP85595       1 MRDISMVLERWGAWAASG-DTN-IGYPRTAAGLSRLLPASRAGRPSCCDDDGMFINEAMIRLSKHD-EYLCAIIEKYYID 77 
WP_038241585  80 GYSKREIARDLRVSESLVRHKMQVAESFIAGCLEMLDIQLD 120 Xenorhabdus szentirmaii
ACQ68276      80 GYSKRAIARRRRVDEGMIRAKLLIAEGFIDGCLSLLAVRLD 120
KMV67193      79 GHSTRFIADAMDIPRMQVRTSLNASEEFLEGCLVAMAVRLD 119
KKF37051      80 GHTTRHIAENMSLDRNAVRKSLVASEEFLEGCLVAMGVRLD 120
EQB99554      78 GLSKRSIARLLEVSDIEVRSRLQKGESFVQGCLAMLDIKLE 118
WP_042395526  79 GLSKREIGRRAKTSEREIRRVIETAEGFIEGCLCMLGVSLQ 119 Pseudescherichia vulneris
Q7MZ44        80 GMSKRSIGRKYKLNESEVRKRMAIAESFILGCLTASDETLE 120 Photorhabdus laumondii subsp. laumondii
CCH:MU9_1880  81 GMSKRAIGRKYKVREDEIRKQVQSAESFIFGCLETLAVQLD 121
WP_038238270  78 GIALRSMSDPLGISHNEVTKRVQVAEGFIEGVLAVSGVTLE 118 Xenorhabdus szentirmaii
KYP85595      78 GMTLRALEKVLGISYNTVSVRIQQGEAFIQGGLCALDIKLE 118
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