Conserved Protein Domain Family
PRK00419

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PRK00419: PRK00419 
DNA primase small subunit PriS
Links
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Statistics
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PSSM-Id: 234755
Aligned: 49 rows
Threshold Bit Score: 270.336
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
73669083    1 MDNRTARFLKTRFQKYYKNAEIG--LPDHLPNREWAFIFFDSMPDKmmhRHKAFGSPGEALDYLYGMAPAHVYNSTAYYE 78 
14520400    3 LREVTKEERKEFYSNEWNAKQIPdfILQNLDKREFGFDHTGEGPSD---RKNSYTDVRDLEDYIKATAPYAVYSSVAFYE 79 
18976482    3 MREVTKEERSEFYSKEWSAKKIPkfIVDTLESREFGFDHNGEGPSD---RKNQYSDIRDLEDYIRATSPYAVYSSVAFYE 79 
14590130    3 LREVTREERKNFYTNEWKVKDIPdfIVKTLELREFGFDHSGEGPSD---RKNQYTDIRDLEDYIRATAPYAVYSSVALYE 79 
242399741   5 FKEMTKEERKIYYLKEWNVKKIPsfITKTLENREFGFDHTGEGPND---RKNVFHHIKDLEDYVKITAPYSIYSSVALYE 81 
240102400   4 FREVTPEERKAYYQREWSAEMLPdfIVETLENREFGFDHTGEGPSD---RKNEFSDVRDLEDYVKATAPYAMFSSVALYE 80 
212224928   5 FREVTKEERVLYYKAEWNAKKLPrfLVEKLENREFGFDHTGEGPSD---RKNVFMDVRDLEDYIKATAPYAIYSSVALYE 81 
84488915    5 LKPASKYERKIFYKEEWNVKDVPdfIRNSLTSREFGFDHYGNGPND---RYKVFVDDLRLKRFIKVKQPFAAYCSVAFYD 81 
15678613    5 FEPATPLERKRYYREEWNVRDLPdfIADNLHMREFGFDHNGRGPSD---RYRVFRDERSLARFMRVRYPFAAYSSVAFYR 81 
304314726  36 FEAATPLERKRYYREEWDVRKLPdfIARNIHMREFGFDHTGRGPSD---RYRVFDDEKRLSRFMRARFPFAAYSSVAFYR 112
73669083   79 YPDarkmNEKNWLGAELIFDLDADHLPDA-------PKNYA-DMLELVKKETFKLMDFLLEDFGFseQEIELVFSGgRGY 150
14520400   80 KPQ----EMEGWLGAELVFDIDAKDLPLRrcn--hePGKVCpICLNDAKEIARDTLIVLKEELGF--EDVHVVYSG-RGY 150
18976482   80 NPR----EMEGWRGAELVFDIDAKDLPLKrcn--hePGTVCpICLEDAKELAKDTLIILREELGF--ENIHVVYSG-RGY 150
14590130   80 KPQ----EMEGWLGTELVFDIDAKDLPLRrce--hePGTVCpICLNDAKEIVRDTVIILREELGF--NDIHIIYSG-RGY 150
242399741  82 EPK----NMEGWLGAELVFDIDAKDLPLKrcn--heTGKVCpICLDDAKELTKDTLLILREDFGF--ENIHLIYSG-RGY 152
240102400  81 KPS----EMEGWLGAELVFDIDAKDLPLRrcmdlhpSGQVCpLCLEDAKELVLDTLTILKEDFGF--EEIHVVYSG-RGY 153
212224928  82 DPK----GMSGWLGAELVFDIDAKDLPLRrcghiheHGKVCpICLGDAKELARDTLVILKEDFGF--EDVHVVYSG-RGY 154
84488915   82 KPN----QRKGWQKSELVFDVDAKDIPIRtcd--caEGEVCeKCLNQAKEIVLMIRDVLSGDFGL--TNINLIYSG-RGY 152
15678613   82 EPW----KRKGWQRSELIFDVDAKDLPVRsc----eCDGVCpTCLDEARELVLMMVDTLKGDLGL--GDIHVIYSG-RGY 150
304314726 113 EPG----KRRGWQRSELIFDVDAKDLPVRsc----dCEGVCeRCLDEAKELVLMMVDTLRGDLGL--GDVHVVYSG-RGY 181
73669083  151 HFHVRSPKVLKLGSAERREIVNYLSGRDLDFKYFFREVAM-----DGEfGTGSktfkgmknvpfkctlvgydsGWGRRIA 225
14520400  151 HIRVMDGWALSLDSKSRERILSFISASEIEDHSEFRKMLLe---rRGWfVLNH--------------------GYPRVFR 207
18976482  151 HIRILDEWALQLDSKSRERILAFISASEIENVEEFRRFLLe---kRGWfVLKH--------------------GYPRVFR 207
14590130  151 HIRVLDEWALKLDSKSRERILSFVSASEIEDVEEFRKLLLn---kRGWfVLNH--------------------GYPRAFR 207
242399741 153 HIRVLDDWALGLDSKAREKILSYISSAEEITFEDLQERKIll-----------------------------ssGYYRVFR 203
240102400 154 HIRVLDDWVLDLDSKAREKILAYVSAAEEITFEDVQSRRIml-----------------------------saGYFRVFR 204
212224928 155 HIRVLDDWAIQLDSKSREKILAYISAAEEVTFEDIQSRKIml-----------------------------ssGYFRVFR 205
84488915  153 HVRVLDEDVMDASSELRGDIIQYVTGSKLPDLSNEYGFNDlqpfiIPF-------------------------GYPKNFT 207
15678613  151 HVRVLDPEVMELGSEVRAEILRYTAGAREPRRKFTDGVSSyemehFSIpL-----------------------GYHRVFT 207
304314726 182 HIRVLDPGVMELGSEVRAEILRYTAGARQPRRKFTHRGESyemehFSIpL-----------------------GYHRVFT 238
73669083  226 LYLTDYMKAECGKrykkdmfpelRRYEKVGDTTIKKLISLTnsenglkDILEKGRLDFD-VRNFKDIAAYFMRESVEDFL 304
14520400  208 LRFGYFILRVKVEhli---------nfGIRKNIAKRILDNket--iyeEFVRKGILAAFpDGVGIESLAKLFALSTRFSK 276
18976482  208 LRLGYFILRVNVPhll---------siGIRRNIAKKILDHkee--iyeGFVRKAILASFpEGVGIESMAKLFALSTRFSK 276
14590130  208 LRFGYFILRIKLPhli---------naGIRKSIAKSILKSkee--iyeEFVRKAILAAFpQGVGIESLAKLFALSTRFSK 276
242399741 204 LRFGYFIKRVSEYhlr---------niGLNKRQIEQIIDGrde--iyeNFVKKAMISAFsQGVGYKTLLRLFSLSTTFSK 272
240102400 205 LRFGYFLRRINLNhll---------nvGIKRRQAEAILEErde--iyeGFVRKAMLTAFpQGIGYKTLMRLFSLSTTFSR 273
212224928 206 LRFGYFIARANENhll---------niGLRKGQVKKILESrde--iyeGFVRKGLLTAFpQGIGYKTLARLFALSSTFSK 274
84488915  208 RWSKYTILHLRRS----------SKLDDVNNQLLRDVLKHR-------NLLQEDLWGMFrSNIGPIRYKKVMNAISRINM 270
15678613  208 ERARHVLLHLRGD----------EDIEDVTARTVKTAVRNR-------NLILEDRWGEFrSVIGPRVYPRLVKGISKINM 270
304314726 239 ERAKHVFLHMRGD----------ERIENVTARTVREVVKNR-------DLLPDDRWGEFrRRIGPRVYPRLVAGVAGINM 301
73669083  305 HRfgtsVDEPVTADIKRLIRVPGSLHGGSGMLVKKLa--lSELEKFDPLTDAV--VFGERPV 362
14520400  277 AY----FDGRVTVDLKRILRLPSTLHSKVGLIAKYIgnneRDVMRFNPFKHAVp-KFRRKEV 333
18976482  277 AY----FDGRVTVDIKRILRLPSTLHSKVGLIATYVgtkeREVMKFNPFRHAVp-KFRKKEV 333
14590130  277 SY----FDGRVTVDLKRILRLPSTLHSKVGLIAKYVgtneRDVMRFNPFKHAVp-KFRKEEV 333
242399741 273 AY----FDGRVTVDVKRILRVPSSLHSKVGLVATYIgndeKDLEKFNPFKDAVp-KFREKEV 329
240102400 274 AY----FDGKVTIDLKRILRVPSSLHSKVGMVTTYIgddeRKLEKFNPFRDAVp-EFRKEEV 330
212224928 275 AY----FDGRVTVDVKRILRVPSSLHSKVGLVATYIgsdeRKLEKFNPFRDAVp-KFREEEV 331
84488915  271 QI----TDTKVSIDLKRILRLPSTLHSKVSMKSTLI----KNIETFDPFDDAVpkFVYERND 324
15678613  271 RM----LDAKVTIDLKRILRLPTSLHSKVSMICMEV----KNPETFDPLKSAVprFVDERE- 323
304314726 302 KM----VDAKVTIDLKRILRLPTSLHSKVSMICMEV----KNPETFDPLKSAVpkFVHERES 355
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