Conserved Protein Domain Family
COG5518

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COG5518: COG5518 
Phage capsid portal protein XkdE [Mobilome: prophages, transposons]
Statistics
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PSSM-Id: 444269
Aligned: 46 rows
Threshold Bit Score: 275.998
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_113155980   1 MSeENNG-------------QGKPQTQVLrlvSVDnkiakaDADSKnVVHSnALDpedeyknwYVG--GSNDAGVLEPPY 65 
WP_041866560   1 MK-KRQPrrqaarnsgkaavSRQRHMSMIktgTLG------NPEPV-LTTG--TD--------YRDiwYDNAVDHYSLSI 62 
WP_011573583   1 MSsk--------------ptIKIRAGSNF---SFG------DPEPV-LNNN-LTD--------YLGi-fTHNGEYYTPPV 46 
WP_011978418   1 MTaak------------etkTTKSATHMF---EFG------APEPV-LNNH-ISE--------YIGvyLDTLGEYYRPPV 49 
WP_012341102   1 MK-KQK---------------NTNKPIMF---SFQpq---gDWELS-MPPA--LD--------YTGiyFNDFYQCYEPPI 47 
YP_003613342   1 -------------------------MSII---SFG------KPEPV-LTTG--TD--------YREiwYDNAADHYTQPI 35 
WP_012883476   1 MK-RTSHrrqk------aqnaPRKKMSII---TFG------KPEPV-LTTG--TD--------YRDvwYDNEFNHYTLPI 53 
WP_013575848   1 MN-KRKPsrqak----kelpDRSKKMSII---SMG------RPEPI-LTTG--TN--------YRDiwYDNEFDHYTLPI 55 
WP_045109595   1 MNsikst---------ttepVKDKSIDTF---SFG------DPEPC-LDNH-MTE--------YIGl-yADMDGLYSPPV 51 
WP_121813781   1 MS-RKKNrnkkqqfaalpmpVSTQGRSAM---FIG------PPELV-LTSG--TD--------YHEiqYDDTWNTWTLPI 59 
WP_113155980  66 PLRHLDRLSQENNALSPCIEAMVTNVDGTGYDfertgedaetskddakikelreffdepwpgQSFTSIRKLLRRDLERTG 145
WP_041866560  63 DRLALAQLVNLNGQHGGVLYARRNMVAADYRDg-----------------------------gLSHEQLKAGMFDYLTFG 113
WP_011573583  47 SLTGLVKCSRANPHHASALYFKRNMATKWFIPs----------------------------pYLSQKSLSRAAYDYHWAG 98 
WP_011978418  50 SLSGLADLMNANPHHNSILHFKKNMVLKWFVPs----------------------------tLMTYASMQRLALDYVVTG 101
WP_012341102  48 KRWSLARLPSQNAQHCGILHSRANMIAADYdq-----------------------------gGLSKMDMRAACLNLIQFG 98 
YP_003613342  36 DRLALAQLINLNGQHGGIIHARKNMVTADYQGg-----------------------------gLTFDELEAAVFDYLTFG 86 
WP_012883476  54 DRLALAQLVNLNGQHGGILYARRNMVASDYQGg-----------------------------gLSHDDMLAAAFDYLTFG 104
WP_013575848  56 DRLALVQLTNLNSQHGGVIYARHNMVASDYLGg-----------------------------gLTHEQLRGGVFDYLSCG 106
WP_045109595  52 SLSGLVKLLRVNAQHGPILYFKRNMILKWFKPn----------------------------tVLSQRTFKKFAFDYCWAA 103
WP_121813781  60 DRLALANLVNASPQHDGVMYARRNMVTSDYQRg-----------------------------gLTRSQLDAGMFDYLVFG 110
WP_113155980 146 NAYLEILRNAQDEIVFMRHVDSKMMRLVNldsgvpvdrkvrrkgrevtitikqRe-------RKFVQLLNgtt--lvYfr 216
WP_041866560 114 DLAILKVRNGWGEVIALAPLPSLYLRLRK------------------------S--------GEFVILQQ---------- 151
WP_011573583  99 QCYFRARYNTFGQFLYFEHLPALYIRKLApk--------------------ngQf-------NRYGMLTS-------G-- 142
WP_011978418 102 MMYFQVFKNGFGKVVRTEWLPSLTMRRGR------------------------Kk-------GVFFKLNK-------D-- 141
WP_012341102  99 DVGLLKVRNGFGQVVKLITLSSLYLRKTK------------------------E--------GNYRYLVRrsltdteQ-- 144
YP_003613342  87 DIAVAKIRNGWGDVIGLQPLPGLYLRRRK------------------------ErenaetvpGDYVVLQE---------- 132
WP_012883476 105 DIAILKVRNGWGEVIALTPLPALYTRIRK------------------------T--------GEFVVLQK---------- 142
WP_013575848 107 DLAILKVRSGWGDVVDLLPLPSLYLRVRK------------------------T--------GEFVVLQD---------- 144
WP_045109595 104 NAYFQVIKNAFGHVIKLRHLPALSMRYTS------------------------Tp-------GVYAQRLS-------N-- 143
WP_121813781 111 DLAILKVRNAWGAVVALCPLPSLYLRRRK------------------------T--------GEFVVLQK---------- 148
WP_113155980 217 efGSsrdlnkrtaawsekgqrlPAKDRATEIIHFTALPDAHTPYGVPRWISQLPSVLGSRKAEEYNLDFFDNGGIPPVLI 296
WP_041866560 152 --GE------------------PLVYPPEDVIFLQQYDPQQQIYGLPDYIGGIHSALLNSEATIFRRLYYHNGAHTGCII 211
WP_011573583 143 --GK------------------LMPFLNDEVVQLKNYDPTQGIYGTPEYLAGLQSMLLNEDATLFRRRYYKNGAHMGYVF 202
WP_011978418 142 --GS------------------KTEFKPGEVIQINNPDLKQDIYGLPEYLGGIQSVLLSEEAGLFRRKYYINGAHMGYIL 201
WP_012341102 145 --SD------------------ILTYPAQDIIFIKLYDPMQQVYGVPDYMGGIQSALLNSDATTFRRRYFANGSHLGFIL 204
YP_003613342 133 --GE------------------PLAFPPDDIIFIKMYDPQQHIYGLPDYIGGVHSALLNSEAVIFRRRYYHNGAHTGGIL 192
WP_012883476 143 --GE------------------PLVYPPEDVIFIKMYDPQQQIYGLPDYIGGIHSALLNSEAVIFRRRYYHNGAHTGGIL 202
WP_013575848 145 --GE------------------PLVYSPDDVIFLKQYDPQQQIYGLPDYISGIHSALLNSEATIFRRRYYHNGAHTGGII 204
WP_045109595 144 --GK------------------VLRFKKGEVIHLKEYDPNQGIYGIPQYYGGIQSALLNEDATLFRRKYYKNGAHMGFIF 203
WP_121813781 149 --GE------------------PLVYPPDDIIFISQYDPQQQIYGLPDYIGGVNSALLNAEATVFRRRYYHNGAHLGGIL 208
WP_113155980 297 LLQGGTLQPETKGALDLKMgRGTASKKNRVQVLEVM-PSGGtfNSpnqaRVTVERFGAERQDDSmFEGYDEKCETRVRRA 375
WP_041866560 212 YTNDPNLSPEMEEQIMACV-EQGKGVGNFKTLFVSI-PKGD--PE----GIKFIPIGDISAKDE-FSNIKNISARDVLNA 282
WP_011573583 203 LNTSGEMSEEDEDLLSKEI-GSSKGVGNFRSMFLSL-PGAD--AD----SVKILPVGDISTKDE-FERVKNITRNDVLAM 273
WP_011978418 202 VTNDADLDEETAAKIQKKV-QDSKGPGNFRSLYLNIgKSAA--KD----PVQIIPVGDIGTKDE-FERVKNITMIEILSM 273
WP_012341102 205 YTTDPNVTEEMEENINKSL-NGSQGVGNFKSMFVNS-PDGH--PD----GLKVIPIGDTGKKDE-FGTIKNVSAQDVLTA 275
YP_003613342 193 YTRDPSMTDEMEEEIEQQL-RDSKGIGNFSTILVNI-PGGD--GD----AIKFIEMGDISAKDE-FASVKNISAQDILNA 263
WP_012883476 203 YTSDPNMTDEIEEEIERQL-ASSKGIGNFSTILVNI-PNGD--KE----GVQFIQMGDISAKDE-FANVKNISAQDVLNA 273
WP_013575848 205 YTNDANLTDEVEDEITERL-ESSKGIGNFSTIFVNI-PGGN--EK----AIQFIPVGDIGANDE-FNNVKNISAQDVLNA 275
WP_045109595 204 SMADPNLSTDDENDLKAAI-RDSRGVGNFRSLFINN-RSGK--ADae-kAIKIIPVGDISTKDE-FERIKKMTLNDMLSM 277
WP_121813781 209 YTSDPNLSEETEKLIRKKI-ESAKGLGNFRNMYINV-PGGD--KD----GVKFIPVGDISAKDE-FANIKNISGQDVLTA 279
WP_113155980 376 FRLPPIFVGAAEDYSF--ASATASYAVAEAQVFKPERDEFDEiINV--KL--VDAMgydgyRLvsKPlviedatiklqgi 449
WP_041866560 283 HRYPAGLAGIIPSNAAglGDPVKARETYRQDEVIPLQRMLRDaVNHdpEIpaHLHL-----MF--GE------------- 342
WP_011573583 274 HRINPALSGVMPDNDAgyGDIEKIGRVNYENEVVPIQQVFLQ-LND--YLpaGKMI-----AF--KEp------------ 331
WP_011978418 274 HRMQPGLSGIMPDNTGgfGDIEKIMRVYHELEIGALQQPFLE-INQ--HIg-AGAV-----SF--REpv----------- 331
WP_012341102 276 HRYPPGLSGVIPQ-TGsfGDPLKMRLAYRQDEVLPMQDLISSsINGdiEIarNKALq---iSF--KQ------------- 336
YP_003613342 264 HRFPAGLAGIVPQNTAglGDPEKIERTYKKNEVLPIQRRLAMaINSdpEIprHLHL-----NF--TE------------- 323
WP_012883476 274 HRFPAGLCGIIPQNAAglGDPEKARNTYRKDEVIPIQRRFMAsINKdpEIpqNLHL-----IFdfAD------------- 335
WP_013575848 276 HRFPAGLAGIIPQNTAglPDPEKSRATYRKDEVIPLQRMIMNaVNSdpEIplHLRL-----NF--AF------------- 335
WP_045109595 278 HRAQEALSGQTSGESPgfGDLDKITRAYYNNEVVPMQQDMLE-INE--YLpaPLHI-----KF--AEp------------ 335
WP_121813781 280 HRFPAGLAGIIPQNTAglGDPEKARATYRQDEVLPVQRKFAEaIAAdrEVpeRFYL-----MF--AA------------- 339
WP_113155980 450 qmaistnavekedvlyeineasgtdirykepekpkpgfdedgnplPGFVPPQP 502
WP_041866560 343 ---------------------------------------------EAAKTDTK 350
WP_011573583 332 --------------------------------------------eTAIAAE-- 338
WP_011978418 332 --------------------------------------------wMGVQKE-- 338
WP_012341102 337 ---------------------------------------------RQILQK-- 342
YP_003613342 324 ---------------------------------------------ETTVKGAA 331
WP_012883476 336 ---------------------------------------------DTTIQGA- 342
WP_013575848 336 ---------------------------------------------DTTSEGEK 343
WP_045109595 336 --------------------------------------------aYSDLNPRS 344
WP_121813781 340 ---------------------------------------------PALST--- 344
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