Conserved Protein Domain Family
COG4643

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COG4643: COG4643 
Uncharacterized domain associated with phage/plasmid primase [Mobilome: prophages, transposons]
Statistics
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PSSM-Id: 443681
Aligned: 110 rows
Threshold Bit Score: 188.143
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
ALP53984        1 MTH-----------------------------------------------------------------ENYDDVLAQLHA 15  
WP_011486058    1 MNdka-------------------------------------------------------------edLAFGRWPDILQA 19  
WP_011486326    1 MATgsnqqapqfe----------------------------------------------erlserlsdLADGKWADILAG 34  
WP_012368359    1 MAlplqi--------------------------------------------------------etvrpYLNGQWLQILAA 24  
WP_077304075    1 MASdsgravdgqsgrtdlfslsfpigipqekkrkrkafrtgttekngsyrtrkkrgclmrspftggggAENPDWYSILAS 80  
WP_084330561    1 MRTrknplm-----------------------------------------------------gsgvsmIDYTRLDAALRA 27  
WP_052465114    1 MSKtnrihld----------------------------------------------------adevrrEARGRWESILSS 28  
WP_084207332    1 MEAstmkhey---------------------------------------------------etqqvkeDARGRWERVLLA 29  
WP_083251227   63 awilgipfhsavasrntpansgwirskqwnpsrrkhatvtygpsggcmsaqlkslperteyrhvpigeRAAGRWPDIFAA 142 
WP_096461989    1 MTTkhlrris----------------------------------------------------adevrrAASGRWHEILTD 28  
ALP53984       16 YGLEVea-------------pLEiGgtkpARC--YEaggD--REKRGWYWLHELr------LDD-----Glyl-vgSFGv 66  
WP_011486058   20 RGMSAryfsgkn---gpcpfcPDgGg--kDRYr-WT---QkkYG--GVWVCSACt--------EgkyatGfnmlmkHMG- 79  
WP_011486326   35 AGIPSeslrnkk----vqcplhE-Gl--kGKFr-FE---NkdGN--GNWHCAVCgh-----------gdGmsllmkATG- 89  
WP_012368359   25 LVPELdaaiarkg---rhvacpvhGg--rDGFrlFK---DaeYT--GGGVCNTCg-------iFh---dGfellswING- 83  
WP_077304075   81 LGINVpqnprrh------gpcpicGg--kDRFr-FD---NrnGE--GTWFCNQGsaehrdgKRAg---nGtallagFFD- 142 
WP_084330561   28 GGLIPg--------------dIEaGr--lVRCk-VDg--DrgGKKSGAYLLFDDd------LPTc--------------l 68  
WP_052465114   29 LASGFdpalqrvgkhvdcpmpSH-Gg--kNDFrfFK---DvaET--GGAICS-Cg-------kWg---dGfallmaKNG- 88  
WP_084207332   30 LAPPLkaalertg---khvpcpvhGg--rDGFrlFR---DvaDT--GGGICNTCg-------sFa---nGfallmwING- 88  
WP_083251227  143 LAPDLgpalgkyg---khvscpihGg--rDGFrlYA---DprRSLYGQAVCNTCg-------sFi---nGfvllsaLYG- 203 
WP_096461989   29 LAPALelalerpg---rhvpcpvhGg--rDGFrlFR---DyrDT--GGGICNTCg-------pVp---nGlgllmwVNY- 87  
ALP53984       67 F---RGdd-------------pGTQkialnkrcqdcgqimamRERkcpscggknikkRELTQEQQAAI-KQ------RQA 123 
WP_011486058   80 YqtfREaaddv-------rdyfGANp-------------------------------------TVKPItRE--------- 106 
WP_011486326   90 Ks-yVEaakwvi-----ydyygG-------------------------------------TPSSRKPG---------LLK 117 
WP_012368359   84 Wn-fAQsieai-------gqvlGIQp-------------------------------GQIQAPSRAIT-RN------AVD 117 
WP_077304075  143 Ig-hRDalgkire---isvdpgG-------------------------------------VQVSSRPE-KY------AA- 173 
WP_084330561   69 WwhwKA----------------GTSgvwg-------------------------nldRPLTDAERNRQ-RQ------RIE 100 
WP_052465114   89 Ws-fPDalqev-------gsylGLT--------------------------------DQKEREERAKR-RNdpreqeRLA 127 
WP_084207332   89 Wd-fGRtirev-------aeqvG----------------------------------------SRSRSa----------- 109 
WP_083251227  204 Ws-iSEtyqrvdlvlaglpaesGVRi---------------eKLL------------KR-FKQE---------------- 238 
WP_096461989   88 Wr-fTEalaavaew-lkllpwdGVEre-----------------------------tQRRHSARQTTV-QQ------PNT 129 
ALP53984      124 ENKRK--LEAARKVEADRAAQWAHAVWTHCREAa-----------PRE---HDYLARK--LLNHTgG--------ARifd 177 
WP_011486058  107 QRLAM--GGSMTPELVLRNRTRMQKTWDEGREVt-----------AGDp-vALYLHGRvrGL----Dfvp---anIR--- 162 
WP_011486326  118 KKGPA--PEGKPEEAIARLRAKYEKVWSEARPIv-----------EGDp-vALYLHSRipGLEVFpa-------sLR--- 173 
WP_012368359  118 WKAR-------KQDEDKAIIHRLNQTWGETLSLad---------tRAQp-vWNYLHRR--GIVTR-Lrpew-dsvLR--- 173 
WP_077304075  174 ---PI--PEVDSSS-----QRKVRRVINESVRLadigegsrltlqAGKsaiEKYLSSR--GLPLL-Lpee---arIQ--- 234 
WP_084330561  101 QAQRE--RHAEQSARWADNRVKLARLWGSAQTVt-----------PSSa-aGLYLVNR--GLAIpvt------daLR--- 155 
WP_052465114  128 KERAE--KEAKRKKDDQTLRRGLNEVWSNSVAIdh---------pQAEp-aRLYLARR--GLKVR-Nlp----qtLR--- 185 
WP_084207332  110 -------NSAADKSEDEMRREQLNRTWRESVALsh---------pSAEp-aRLYLARR--GLSV--Kvp----etLR--- 161 
WP_083251227  239 -------DALKRRLA----LSDAVQTLKSSKPVwa---------sMTWp-lRRYLDER--GIPMH-LaypylgsdVR--- 291 
WP_096461989  130 ANLPLapLIYRDADADARLCAVIAKIWSESISLlh---------hKAVp-aQRYLQGR--RIPLR-Qvtdl-gdaLR--- 192 
ALP53984      178 dhdgvmlqgAERRdyey-----------lalfHGALVVPMCDiATGNVRGLQFILSrehhkeriakTGrD---------- 236 
WP_011486058  163 ---------FHPAlpywapppdgqdkpvllgrFAAMLAYAQA-PDGSLAQLHKTYLt--------sEG-Akanv------ 217 
WP_011486326  174 ---------YHPGlsffgqpgnngelgknyglHPCMVAAVVD-ETGRACNIHRTFLt--------pNG-Kklalsepdsd 234 
WP_012368359  174 ---------FHPNlpyhded------glfidsYPALLGKIVT-QQGRSATFHRIYLs--------eDG-Fkapv------ 222 
WP_077304075  235 ---------VHPdg-------------------idVVIPLTG--DGDLPSLHVTALs--------rDG-R---------- 265 
WP_084330561  156 ---------FHPRldywhd-------gamigsYPAMLGAVTS-PAGDLVAVHRTYLt--------dDG-Hkapv------ 203 
WP_052465114  186 ---------CHPYlpyyee-------gekigvFPALVAMVQA-PDGAPVTLHRIYLt--------dEG-Fkapv------ 233 
WP_084207332  162 ---------FHAAlgyyed-------nrrladYPTLIAQVTG-QGGDAVTIHRTYLt--------pEG-Rkapv------ 209 
WP_083251227  292 ---------YHPElpyfeg-------grevdrFPALLAIARN-RDGKPCFLHRSWLa--------kNG-Hgkap------ 339 
WP_096461989  193 ---------FHPQleyrdea------gtvigdYPGIVAAVTD-PKGEMVTLQRIYLt--------vDG-Rkapv------ 241 
ALP53984      237 ----------KEYwPKG---------MQKDGIAHL--------IGG---SP-Q-GVALVTEGFATAITLHEASN-TPVAI 283 
WP_011486058  218 -------plvKKT-DLG---------VGVNSFAVR--------MLEp----cG-DTLGVCEGFETGCASAMLRD-IPVWP 266 
WP_011486326  235 dptqlvdlpaKKL-MPS---------IGARHYQIR--------LAKp----aD-GVLGIGEGIETALAAMVYSG-VPTWS 290 
WP_012368359  223 -------ekpKKM-MPIps------dRTITGGAIP--------IGEp-----G-EVLGVSEGIETALAVTRATG-QTCWS 273 
WP_077304075  266 ----------KRP-LSWtgascrytlGQLSGSYASipsgekqiSVPs-fPS-I-RFYCLGEGLETTISGRFLSG-WGGIF 330 
WP_084330561  204 -------pavKKLtETA---------GPLAGASIK--------ISEpapRPdGlLGLGVAEGIETAMAASILSG-VPVWS 258 
WP_052465114  234 -------pspKKL-MAYps------dRTLRGAAIR--------LGPlt---kE-RTLGVAEGIETALAVQQGSDeMPVWA 287 
WP_084207332  210 -------dspKKL-MRHpl------aRQMTGGAIR--------LVPa-----N-HRLAVTEGIETALAVTEATG-IPAWA 260 
WP_083251227  340 ------vscpRKT-TTFf--------RKQDGAAIR--------LGGh---F-G-SQGDVAEGIETALSVAIAVE-RPVWS 390 
WP_096461989  242 -------etpKKM-MPVpn------gKAVTGASIK--------LGKp----tE-SVLGVAEGIETALAVCTGSG-MVTWS 293 
ALP53984      284 AFDANSVPKVGAALFKQHrK-------RIHLIFCADDDWLQkcsackaytpvaeikcrhcgaahgKH-----NAGVERAS 351 
WP_011486058  267 CLNGPAMAEFELPPELHG-K-------IRKLVIFEDSDELKafg------------------rnpDGstkwrRPGSVYAQ 320 
WP_011486326  291 VVADTGMANFFVP----A-A-------ITELVIFADNDHLTv-----------------------RGg----NPGLDAAR 331 
WP_012368359  274 VVNATLLARFEPP----S-N-------VKMLYIWADHDLs--------------------------------ETGLNAAN 309 
WP_077304075  331 AVNSNGIQSFFDDp---E-TveifrknALGVAALVDRDGn--------------------------------ETGQKASA 374 
WP_084330561  259 CVSAHGLKSFNPP------Pr------VRSLYVFGDRDEs--------------------------------GVGQKAAA 294 
WP_052465114  288 TISASILENFEPP----S-E-------VVLLCIWADKDRs--------------------------------EAGQKAAK 323 
WP_084207332  261 TGNAHLLATFQPP----A-G-------IDQILVFADKDRPS------------------------RQhp--sGHGQEAAR 302 
WP_083251227  391 LVNTSLMSAWSPP----D-Eh-----cPRQITIWGDKDVk--------------------------------QAGEQAAE 428 
WP_096461989  294 VLNATLLESFVPP----D-D-------VRTLFIWADLDREH------------------------RGk----RRGEEAAK 333 
ALP53984      352 EAALATG-----------GSY-IVPQFADprpddkKGPTDYND-LHAIEG-LNTVRAQIEAALPAGRTAPAGA 410 
WP_011486058  321 KLADRARlag------lrTLI--IKSa--------KVGDDMAD-YWSAQA-------------------TA-- 355 
WP_011486326  332 RLVERADvqerlldgslkVVI-RTPE---------IQGTDMVN-FLQEIAt---------------------- 371 
WP_012368359  310 ELKKKAWqkg------ilTQV-LIPPIPTsl---gVKSWDWND-VLNVYG-AMGFTKVhi------------- 357 
WP_077304075  375 ALARKAKeag------ipVLF-LLPPSVVrg---sEKSADWND-ALVELG-EQGAKAALMLAISRSEEELAKN 435 
WP_084330561  295 ALAGRAAaag------lvARV-LLPD----------AVGDWADeLv---AwRAAV------------------ 329 
WP_052465114  324 ELKKKVGi----------qAVgLLPGEPIpe---nKKSIDWLD-IVAKYG-FSGIYSLKSIKQlikkag---- 377 
WP_084207332  303 ELVKRLWslg------irAGA-IAPAIDIpe---gKKGIDWLD-VFVLEG-KAGFPALVSVEQalhqaa---- 359 
WP_083251227  429 ALSRNLKdkg------lfVSA-RFPETPIpr---dAKSVDWND-VIMNLG-VEGFRNTYLWGF---------- 479 
WP_096461989  334 RLSERLErcg------irSQT-FLPPLPIpa---gAKGVDWND-AWTLLR-FGGFPSRLALGRva-------- 386 
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