3IX1


Conserved Protein Domain Family
NMT1

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pfam09084: NMT1 
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NMT1/THI5 like
This family contains the NMT1 and THI5 proteins. These proteins are proposed to be required for the biosynthesis of the pyrimidine moiety of thiamine. They are regulated by thiamine. The protein adopts a fold related to the periplasmic binding protein (PBP) family. Both pyridoxal-5'-phosphate (PLP) and an iron atom are bound to the protein suggesting numerous residues of the active site necessary for HMP-P biosynthesis. The yeast protein is a dimer and, although exceptionally using PLP as a substrate, has notable similarities with enzymes dependent on this molecule as a cofactor.
Statistics
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PSSM-Id: 430398
Aligned: 42 rows
Threshold Bit Score: 198.598
Created: 21-Aug-2024
Updated: 4-Dec-2024
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3IX1_B        14 NAVHTFLYVAIENGYFAEEGLDVDIVFPTNPTDPIQLTASGAIPLALSYQPDVILARS-KDLPVVSVASVVRSPLNHVMF 92  Halalkalibacter...
Q5ZV75        19 NPYHTPILVAQQLGFYSEEDIKLAILEPADPSDVTEIVGLGTVDFGVKAMIHTVAAKA-KGYPVTSIGTLLDEPPTGLIA 97  Legionella pneu...
P36597        15 TPYHLPIFLAQTRGYYEREGIEVAILEPTNPSDVTALIGSGKVDMGLKAMIHTLAAKA-RGYPVTSFGSLLNEPFTGLIT 93  Schizosaccharom...
Q5A3Y5        15 APYHIPVYLANIKGYFKDENLDIAILEPSNPSDVTELVGSGKVDMGLKAMVHTLAAKA-RGLPVTSIGSLLDEPFTGICY 93  Candida albican...
P42883        15 TPYHIPIFLAQTKGYFKEQGLDMAILEPTNPSDVTELIGSGKVDMGLKAMIHTLAAKA-RGFPVTSVASLLDEPFTGVLY 93  Saccharomyces c...
Q755R7        26 APYHIAIFLAQSKGYFQQEGVDIALLEPTNPSDVTELIGAGKVDMGLKAMIHTLAAKA-RGFPVTSVASLLDEPFTGVLY 104 Eremothecium go...
3_pfamImport   1 -PYHAPVYLAQKLGYFADEGIKVALLEPNDPSDVTEIIGSGKVDMGFKAMIHTLAAKA-RDFPVTSIGSLLDEPFTGVVY 78 
XP_053027733  15 tPYHLPIFVAQSKGYFAKEGIKVAILEPNDPSDVTELIGSGKADLGCKAMIHTLAGKA-RGFPIKSIGTLMDEPFTGVIY 93 
XP_011386582  15 VPYHLPVYRAQSQGYFAKEGIKVAILEPNDPSDVTEIIGTGKADMGLKAMIHTLAAKGmRNYPVTSIGTLMDEPATGIIY 94 
Q2KXK0        46 ISEISNLLAEPDKGFFKSQGVALGYIPGAGGGDAIRNLLSGQADVAFTDPGSFFMALD-KGEKLRGIYDIYPQNVFNVVS 124 Bordetella aviu...
3IX1_B        93 LAEQD-FDSPADLVGLTVGYPGi-PVNEPILKTMVEAAGGDYEQVHLMDV-GFELGASIVSGRADAVVgTYINHEYPVLK 169 Halalkalibacter...
Q5ZV75        98 LKSSG-INSFQDIVGKRVGYIG--EFGKKIIDDLASLAGIDPTSYKTVRI-GMNVTDAIYRDVIDTGI-GFINFQKVELE 172 Legionella pneu...
P36597        94 LKGNG-INDFKDIKGKRIGYVG--EFGKIQLDDLCSKFGLSPSDYTAIRC-GMNIAPAIINGEIDGGI-GIECMQQVELE 168 Schizosaccharom...
Q5A3Y5        94 LEGSGiTSDFQSLKGKRIGYVG--EFGKIQVDELTKHYGMTPDDYVAVRC-GMNVAKYILEGTIDCGI-GIECIQQVELE 169 Candida albican...
P42883        94 LKGSGiTEDFQSLKGKKIGYVG--EFGKIQIDELTKHYGMKPEDYTAVRC-GMNVAKYIIEGKIDAGI-GIECMQQVELE 169 Saccharomyces c...
Q755R7       105 LRGNGvTDTFSSLKGKRVGYVG--EFGKIQLDELTKYHGMSPEDYKAVRC-GMNVAKHIIQGKIDAGI-GIECMQQVELE 180 Eremothecium go...
3_pfamImport  79 LKDSGiTTDFRSLKGKKIGYVG--EFGKIQIDELTKYYGMEPTDYEAVRC-GMNVSKAIIEGSIHAGI-GLENVQMVELE 154
XP_053027733  94 LEGSGiTSDFRSLKGKRIGYVG--EFGKIQIDELTKYYGMTSKDYTAVRC-GMNVSKGIIEGTIDAGI-GLENIQQVELE 169
XP_011386582  95 IDGNGiTSDFQSLRGKRIGYVG--EFGKIQIDELTSHFGMKPEDYTAVRV-GMNATEAIIDGRVDAAI-GLENVQMVELE 170
Q2KXK0       125 LKSAN-IKRPADLKGKRIGVYSfsSGTRQNLLVLLHQAGLSEKDVEIVVTgVLNFA-PLLQGQVDATAaTDTGLVVGR-- 200 Bordetella aviu...
3IX1_B       170 ----------HEGH-DISYFNPVDYGVPEYDELVLISNEAYVEEsGEVLAAFWRAALKGYEWMVENPDEA 228 Halalkalibacterium halodu...
Q5ZV75       173 hl-------cGETV-FLRIDQLAGLGCCCFCSIQFIVPEITLQQ-PELVKGFLRATQRGAAYTTEKPEEA 233 Legionella pneumophila su...
P36597       169 rwcvsqgrprSDVQ-MLRIDRLANLGCCCFCTILYIAHDEFIAKhPDKIKAFLRAIHSATLDMLKDPVQT 237 Schizosaccharomyces pombe...
Q5A3Y5       170 ealkeqgkdsNDAK-MLRIDKLAELGCCCFCTILYIANDKFIAEnSQAVKKFLKAIKRATDYMLAHPREA 238 Candida albicans SC5314
P42883       170 eylakqgrpaSDAK-MLRIDKLACLGCCCFCTVLYICNDEFLKKnPEKVRKFLKAIKKATDYVLADPVKA 238 Saccharomyces cerevisiae ...
Q755R7       181 eycrtsgrsvEDAR-MMRIDQLACLGCCCFCTILYICNDEFLAAnPDKVRSFLRAVKRSTEFVLNEPEQA 249 Eremothecium gossypii
3_pfamImport 155 ewlanqgrprSDVQ-MLRIDELAELGCCCFCSILYIANDAFIAQnPEKVRKFMKAVKRATDHVLGSPSDA 223
XP_053027733 170 ewckannrpaSDVK-MLRIDELAELGCCCFCSILYIANEDWLKAhPKEAGAFMRAVKAGADDMFADPRgs 238
XP_011386582 171 dwceqqgrpkADVK-MLRIDELAELGCCCFCSILYIANDNFVSQhPEKVRAFMRAVKRAADDLFDQPQQA 239
Q2KXK0       201 ----------RRGLgEVDVMALRDHI--NISSDLFVVREATYQQeAPLLRDFLRAYRDSAAWMIAQPEQA 258 Bordetella avium 197N
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