2I5I


Conserved Protein Domain Family
YdjC_EF3048_like

?
cd10803: YdjC_EF3048_like 
Click on image for an interactive view with Cn3D
Enterococcus faecalis EF3048 and similar proteins
This subfamily is represented by a putative cellobiose-phosphate cleavage protein EF3048 from Enterococcus faecalis v583. It is similar to Escherichia coli YdjC, a hypothetical protein encoded by the celG gene. EF3048 might function as a homodimer. Each of the monomers consists of a (beta/alpha)-barrel fold that forms an active homodimer. The molecular function of the EF3048 is unclear.
Statistics
?
PSSM-Id: 212114
Aligned: 62 rows
Threshold Bit Score: 254.02
Created: 21-Apr-2011
Updated: 2-Oct-2020
Structure
?
Program:
Drawing:
Aligned Rows:
 
Conserved site includes 10 residues -Click on image for an interactive view with Cn3D
Feature 1:putative active site [active site]
Evidence:
  • Comment:based on similarity to Thermus thermophilus YdjC-family protein TTHB029.
  • Comment:This site has a highly negative surface charge.

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Feature 1              ## #                                              # #                     
2I5I_A         6 KLIINADDFGYTPAVTQGIIEAHkrGVVTSTTALPTSPYFLEAXESARisapTLAIGVHLTLTLNQAKpilprexVPSLV 85  Enterococcus fa...
EFL53172       3 RLFVNADDFGLTEGVSAGILTAMaaGVVGGTTAMVCVEGGLERLTRLGpr-iAGRVGLHLQLTGGRPClpp--eqIPSLV 79  Desulfovibrio f...
Q1ZN24         2 RLIVNIDDFGLTEKVNESVVECFkfGIVQSTTIMMNQPATDYAIALIKqg-lVSNVGLHLTLTSGKPIldp--qlVPDLV 78  Photobacterium ...
Q5E560         2 KLILNADDFGLSESVNNGIVECFqsGTVKSTTVMMNQDGIDHAIQLYKqg-lVPDIGLHFTVTAGKPLsnp--edVPSLI 78  Vibrio fischeri...
Q8RCS8         3 YLIVNGDDFGLTKGVNKGIVESYknGILRSTSIMCNMPYADEASQIKEic-pDLGFGIHITLDAGKPLnsp--ykVSTLV 79  Thermoanaerobac...
YP_001717404   2 NLIINADDLGVTAGVNQAILLCMrrGIVSSTSLMVNQDGTDAAIQYLRsg-lIPCTGVHLCISAGRPLlps--grIPSLV 78  Candidatus Desu...
YP_001321924   3 KIIINADDFGLTTSCNKGIIESIinGVVSNTTLMVNMPKAEEAILLAKen-gIDTLGIHLTLTCGKPIlpq--qqVRSLV 79  Alkaliphilus me...
YP_003191466   8 KLIVNADDFGYSRGVNEGIVKAIeeGIVRSTTLMVNQEGTEHALCLLKns-tLRAAGIHLCITHGQPVagl--ekVASLV 84  Desulfotomaculu...
YP_003824745   3 KLIVNADDFGLTPGINRAVKQGVieGIITDTTLMVNMPAAREAMDIAMec-fPDRVGIHLNLTCGRPVldp--aeVPSLV 79  Thermosediminib...
AET57172       2 RLIVNADDFGITTEVSRGILEGMrdGFITDTSALVNSPDFLSSVILARea-gVTEMGVHLTITFFKPVlda--aqVSSIV 78  Paenibacillus s...
Feature 1                                                  # # #                                 
2I5I_A        86 DEAGYFWHqsi--feeKVNLEEVYNEWDAQIISFXKSGRRPDHIDSHHNVHgknKKLLGVALALARKYQLPLRNasrsie 163 Enterococcus fa...
EFL53172      80 TEEGLFPRkkk--avvDIDPNEVRREWRAQLARFRQSGLTPSHLDSHHHIHn-rPGAMPIFVELARELGVPGRAvsdamr 156 Desulfovibrio f...
Q1ZN24        79 DQNGFFLKqdkvissdQISINQAYSEFQAQYDKAIKAGITLTHIDSHHFAAv-fPQYKKAFIKFANDIGLPVRRidneep 157 Photobacterium ...
Q5E560        79 DEDGYFLNrqtl-itkQVCEDEVYLELNTQYQAALNAGFNINHIDSHHFAGv-yPPLKNAFIRFANDINLPVRRvdniva 156 Vibrio fischeri...
Q8RCS8        80 DEKGYFKKgfsh-slnEADIDQIKIEIEEQIKKAFSLGVPITHMDSHHGVQs-hPKVIEIFIDMAIKYNLPVRAtpldke 157 Thermoanaerobac...
YP_001717404  79 DEHGFFHRpsry-aelDINPLDIEREFEAQIEKVLAGGVSISHLDTHHHIQr-yPVVLEALITVAHRYDLPVRHldpa-- 154 Candidatus Desu...
YP_001321924  80 DEEGNFYRrstr-llpVMKLDEVESELRMQIDTFLKCGLKISHLDSHHHVHm-hDGILEIVAGLAKEYNLPLRQpserak 157 Alkaliphilus me...
YP_003191466  85 DSTGNFKNptdi-yneGIDKKEVLNEFEAQIMKVKDMGIRITHLDTHHHIHs-hPLVLEAFIETAIKYRLPARSinqemk 162 Desulfotomaculu...
YP_003824745  80 DKSGRFYRrraa-lmeRATLRDIEKELRAQVDKFLRSGLKPSHLDCHHHLHl-hPMVAEIVAELALELNVPVRAvdsqtr 157 Thermosediminib...
AET57172      79 DPQGNFYRkpql-ipsSYNKQEVKDELRAQIETFLRTGLKMNHLDTHHGFSimdEQILAIVIRLAQEYQVPMRRddsmaa 157 Paenibacillus s...
Feature 1                                                                  #                  #  
2I5I_A       164 tk--dylelyqDVRTPDEXLYQFYDKai----stETILQLLDXvvc--segEVFEINCHPAFi-DTILQNqSGYCXPRIR 234 Enterococcus fa...
EFL53172     157 -----eslteaGVVHADLCLTRFYGEnl----saTTFLSLVDAafaalggsGTVEVMVHPGRh-DAALAAiSTYSEGREL 226 Desulfovibrio f...
Q1ZN24       158 ------skqglNVSTTEAFSSRFFAEga----tlENIQALILSfnsk-fpyGTLELMSHTTLkgDKLLSSlSSYSDKRVD 226 Photobacterium ...
Q5E560       157 ------gqdtlTVPTPDALDMRFFDSga----tfENLKAILLEyklm-hpnGIVELMCHPSSdnTNDLIElSSYSEMRSI 225 Vibrio fischeri...
Q8RCS8       158 ------vilksGVKTIDNFVYTFYDEgv----ekENLLFILKKle-----nGITEIMTHPAYv-DDELMRvSSYNTKREI 221 Thermoanaerobac...
YP_001717404 155 -------mrerIRERGVATPDHFCGEwigpavsrENLYQMILGard--nghQVVELMTHPGFa-DVALQTrSSYVGERQK 224 Candidatus Desu...
YP_001321924 158 -----klykemNITTTDHFTLEFYGEga----nlENLKTIINGfe-----kGILEVMVHPAYv-DEDLKSiSSYNNYRKK 222 Alkaliphilus me...
YP_003191466 163 -----nlfqsiNIPTPDYFCGEWFGEav----spESFRQFISSaqn--qavGIMELMCHPGTv-DQTLAEnSSYIDGRRK 230 Desulfotomaculu...
YP_003824745 158 -----affksrGVITPDQFSVDFYGEga----syQNLVSILDSys-----yGVMEIMTHPGYc-DQELLEiSTYTHFREK 222 Thermosediminib...
AET57172     158 derlkeqivasGVKMVDRLCFDPSSPsv----seEKVRSILECwqd---tdAVVEIASHPGYa-DDKLRAlSSLADEREM 229 Paenibacillus s...
Feature 1                   
2I5I_A       235 EVEILTSQEVK 245 Enterococcus faecalis V583
EFL53172     227 ELAALTEPGLA 237 Desulfovibrio fructosovorans JJ
Q1ZN24       227 EFHILTSQTLK 237 Photobacterium angustum S14
Q5E560       226 ERNILTSPELS 236 Vibrio fischeri ES114
Q8RCS8       222 ERKILTDPDVI 232 Thermoanaerobacter tengcongensis
YP_001717404 225 ELAILCAPETR 235 Candidatus Desulforudis audaxviator MP104C
YP_001321924 223 ELEILTSGVLK 233 Alkaliphilus metalliredigens QYMF
YP_003191466 231 ELNILCQSSTR 241 Desulfotomaculum acetoxidans DSM 771
YP_003824745 223 ELEILTNPFLR 233 Thermosediminibacter oceani DSM 16646
AET57172     230 DLKLFMNQDLL 240 Paenibacillus sp. HPL-003

| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap