Conserved Protein Domain Family
fdxN_nitrog

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TIGR02936: fdxN_nitrog 
ferredoxin III, nif-specific
Members of this family are homodimeric ferredoxins from nitrogen fixation regions of many nitrogen-fixing bacteria. As characterized in Rhodobacter capsulatus, these proteins are homodimeric, with two 4Fe-4S clusters bound per monomer. Although nif-specific, this protein family is not usiveral, as other nitrogenase systems may substitute flavodoxins, or different types of ferredoxin. [Central intermediary metabolism, Nitrogen fixation]
Statistics
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PSSM-Id: 274356
Aligned: 15 rows
Threshold Bit Score: 94.0102
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
SU:SMa0834      4 SFVTRDGSRWMPKYLSAIDGATCIGCGRCFKVCSREVMHLHGiddvgeilgpfdgeeDDFGGELNRMIMVVDSRGRCIGC 83  Sinorhizobium ...
ABA79706        4 TAFTRGGTEYTPKFLISIDMKTCIGCGRCYKVCGQDVMTLRGvteegel--vdcsddEDDDDEILRKVMVMAHPELCIGC 81  Rhodobacter sp...
P20624          4 VAYTRGGAEYTPVYLMKIDEQKCIGCGRCFKVCGRDVMSLHGltedgqvvapgtdewDEVEDEIVKKVMALTGAENCIGC 83  Rhodobacter ca...
P58567          5 TGLTFGGNTWTPKFAESIDKDKCIGCGRCIKVCGYPVLDLKAlneeg------efveDEEDDEIERKVMVVAHPENCIGC 78  Nostoc sp. PCC...
P46050          5 TGLTFGGQVWTPQFVEAVNQDKCIGCGRCFKACGRNVLILQAlneng------efveDEEGEEIERKVMSIIHPEYCIGC 78  Anabaena varia...
tigr:MCA0238    5 SVTLPSGKVWVPKFVGEINQDKCIGCGRCYKVCGREVLEMVGinedgea-vaisageDDDDDEYDKKVMSIANADNCIGC 83  Methylococcus ...
jgi:Daro_1510   3 TGLTKGGTEWTPQFATNLDQSKCIGCGRCYKVCPRNVLDLVErel----------ddDNDDEDDNMMVMSLANPADCIGC 72  Dechloromonas ...
AAR36198        5 TGLRRNKTEYTPQFVVSIDEETCIGCARCYKVCAHDVLTFE----------------EVDEDDSAKMYMKVTNPDNCIGC 68  Geobacter sulf...
ABA89342        5 TGKTRDGSDWTPTFVDNIDDEKCLGCGRCYKGCSRKVLGFK----------------EIDEEDSARMFMFVENPGNCIGC 68  Pelobacter car...
WP_011389937    5 TFTTRDGSPWVPQYITAIDEALCIGCGRCFKVCGHDVLEMKGindeg-----alcdpYDEDEEIVRKVMVVSHGGKCIGC 79  Rhodospirillum...
SU:SMa0834     84 GACARVCPRDCQTHVA 99  Sinorhizobium meliloti 1021
ABA79706       82 GACNRVCPKDCQTHEP 97  Rhodobacter sphaeroides 2.4.1
P20624         84 GACARVCPSECQTHAA 99  Rhodobacter capsulatus
P58567         79 QACARICPKNCYTHNP 94  Nostoc sp. PCC 7120
P46050         79 QACARACPKNCYTHSP 94  Anabaena variabilis ATCC 29413
tigr:MCA0238   84 ESCAKICPKQCYTHVP 99  Methylococcus capsulatus str. Bath
jgi:Daro_1510  73 GSCGRVCPKDCYTYAP 88  Dechloromonas aromatica RCB
AAR36198       69 QACGRTCSKKCFSFAP 84  Geobacter sulfurreducens PCA
ABA89342       69 ASCGVTCPKKAFSFKP 84  Pelobacter carbinolicus DSM 2380
WP_011389937   80 EACGTVCGTKAQTHAP 95  Rhodospirillum rubrum
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