Conserved Protein Domain Family
rsmD

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PRK10909: rsmD 
16S rRNA m(2)G966-methyltransferase; Provisional
Statistics
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PSSM-Id: 236793
Aligned: 90 rows
Threshold Bit Score: 359.034
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
271502550   2 AKHQATSAPGQIRIIGGQWRGRKLPVPDSPGLRPTTDRVRETLFNWLAPVIAHSRCLDCFAGSGALGLEALSRAAAHATL 81 
300721684   2 TKKPQRASLGQIRIIGGKWRGRKLPVPDSDGLRPTTDRVRETLFNWLMPIIQEARCLDCFSGSGALGFEALSRYASHATL 81 
290473619   2 TKKSQSASLGQIRIIGGKWRGRKLPVPDSEGLRPTTDRVRETLFNWLMPIIQEARCLDCFSGSGALGIEALSRNASHATL 81 
253991204   2 AKKSQQQSMGQIRIIGGKWRSRKLPVLNSPGLRPTTDRVRETLFNWLAPVIQEARCLDCYAGSGALGLEALSRYAAQATF 81 
37527952    2 AKKPQRQSMGQIRIIGGKWRGRKLPVPDSPGLRPTTDRVRETLFNWLAPIIQEAHCLDCYAGSGALGLEALSRYAAQVTL 81 
261819461   2 AKKNASSAAGQIRIIGGQWRGRKLPVPDSPGLRPTTDRVRETLFNWLAPVIQQARCLDCFAGSGALGLEALSRYAAHATL 81 
50123267    2 AKKNASSAAGQIRIIGGQWRGRKLPVPDSPGLRPTTDRVRETLFNWLAPVIQQARCLDCFAGSGALGLEALSRYAAHATL 81 
253686506   2 AKKNASSAAGQIRIIGGQWRGRKLPVPDSPGLRPTTDRVRETLFNWLAPIIQQARCLDCFAGSGALGLEALSRYAAHATL 81 
242241272   2 AKHHSTSVPGQIRIIGGQWRGRKLPVPDSPGLRPTTDRVRETLFNWLAPVIQQSRCLDCFAGSGALGLEALSRYAAHATL 81 
251791622   2 AKHQATSAPGQIRIIGGQWRGRKLPVPDSPGLRPTTDRVRETLFNWLAPVIQQSRCLDCFAGSGALGLEALSRSAAHATL 81 
271502550  82 LEAERNVARQLTQNLALLRADNAEVVNTDTLQWLAKPSSalPFDVVFLDPPFRRGLLDDTLRLLEAGHWLAKEAWIYIET 161
300721684  82 IEYDRNVAKQLSANLALLNAENADVVQENALQYLNNPGT--PFDVVFLDPPFRKGMLTETIHLLENNGWLAEESWIYVEA 159
290473619  82 LEYDRHVAKQLSANLALLKAENANVVQGNTLQYLNQTGT--PFDVVFLDPPFRKGMLVETINLLEANGWLAEESWIYVEA 159
253991204  82 IEYERNVAKQLSANLALLNAKNAEITNDSALNYLSQPGT--PYNVIFLDPPFRQGMLAETIKLLEQYGWLADKSWIYVEA 159
37527952   82 IEYEHNIAKQLSANLDLLNAQNAEVINDSALTYLSQPGT--SYEVVFLDPPFRKGMLSETIKLLEEQNWLADESWIYVEA 159
261819461  82 LEMERAVAQQLTQNLALLRAENAEVVNTDALSWLAKPGT--PFDVVFLDPPFRKELLNNTLALLEQQGWLAPDAWIYVET 159
50123267   82 LEMERAVAQQLTQNLALLRAENAEVVNTDALSWLAKPGT--PFDVVFLDPPFRKELLNNTLALLEQQGWLAPDAWIYVET 159
253686506  82 LEMERAVAQQLTQNLALLRAENAEVVNTDALSWLAQPGT--PFDVVFLDPPFRKELLNNTLVLLEQQGWLAPDAWIYVET 159
242241272  82 LEAERNVARQLTQNLAVLKAENASVIHTDSLQWLAGEGS--PYDVVFLDPPFRRGLLDDTLMLLEANGWLAEEAWIYIET 159
251791622  82 LEAERNVARQLAQNLSLLRADNAEVVNTDTLQWLAKPVSplPFDVVFLDPPFRRGLLDDTLRLLEDGNWLAAEAWIYIET 161
271502550 162 EAENRMLAIPPTWSLHREKTAGQVSYRLYIRHASDATPGG 201
300721684 160 ESESAATQVPAHWQLHREKIAGQVAYRLYIRHQESAV--- 196
290473619 160 ESESTATEAPANWQLHREKIAGQVAYRLYIRRQQSGDRSA 199
253991204 160 ESESAAADVPANWQLHREKVAGQVAYRLYIRYLPA----- 194
37527952  160 ESESTAIDVPVNWQLHREKVAGQVAYRLYIRYLPA----- 194
261819461 160 EAENAQLTIPENWQLHREKIAGQVAYRLYIRQ-------- 191
50123267  160 EAENAQLTIPENWQLHREKIAGQVAYRLYIRQ-------- 191
253686506 160 EAENAQLTIPENWQLHREKIAGQVAYRLYIRQ-------- 191
242241272 160 EAENHALTLPANWALHREKTAGQVAYRLYIRHAAERSKEQ 199
251791622 162 EAENRMLAIPPTWTLHREKTAGQVSYRLYIRHATDATPGG 201
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