Conserved Protein Domain Family
recU

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PRK02234: recU 
Holliday junction-specific endonuclease; Reviewed
Links
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Statistics
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PSSM-Id: 235015
Aligned: 168 rows
Threshold Bit Score: 178.532
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
116492697  24 PPIYGKRGMSLEEELNESNAYYLSHGVAVIHKKPTPIQIVKVDYPKRSAAQIKEAYFSKASTTDYNGVYRGKYIDFDAKE 103
71893409    1 -MNHKNRGMFLEKIINNTIEFYCENGIGIFHKKNLDISFKAVS----KDLAVNDAFIFKKSTVDYYGIYKGIFVAFEAKS 75 
15828557    1 -MIKKNRGMFLEKVINQSIDFYNLNDLALFEKKATP-----------KVSKTSGVIIHKKSTVDYIGIYQGIFIAFEAKS 68 
71894499    1 -MTNKNRGMFLETIINKSISFFWENNLAFIEKKGLPITFASIK-KQNNKFILENSIISRKSTVDYIGMLNGKFICFEAKT 78 
193216659   3 NTHYKNRGMLLETIINQTNNFYLKHGVCLVHKKNLDIKFQKVELKDR-KLITKNAQISHKSTVDYYGLYQGRFLAFEAKS 81 
240047249   1 --------MILETIINNTIDFYNRNGVAIFHKKNLDISFKKIG----KDLSVKKGMVLKKSTVDYYGIYNGIFVAFEAKS 68 
269114944   1 MKNKNNRGMLLESIINNTNEYYFKNGIALIHKKNLDIKFKNVK-LEKNKLLLNDASIYSKSTVDYYGVWKGRFLAFEVKS 79 
291320509   1 --MHKNRGMLLETIINQTIDYYTYNHIAFIEKKGLPIKFSNIT-NSENKLLLSNAFVYKKSTVDYIGCYKGRFLAFEAKS 77 
294155858   1 --MHKNRGMLLETLINKTINYYWTNNIAYIEKKQIPITFKSIS-NIDGKLSIGNAVISSKSTVDYIGCYNGSFVAFEAKS 77 
304373202   1 -MIMKNKGMILEKILNLTIDFYWKNNIAICHKKNLDIQFKKVN----DDLQLEKSYISRKSTVDYYGIYKGIFLAFEAKS 75 
116492697 104 TTNSTSFPLSNFHEHQINHMKDCEKVGGICFTIIKFVKLNKIFLLKTK---DLFQFWdsKENGGRKSIPLSVFEEQGYQL 180
71893409   76 T-NENVLNLKQIPEHQLSYLQKIREHFGCAFFIIFFKQLEKFYIVSIDkinLSw-----------KSIPVAFLQKEGFEI 143
15828557   69 FSGKN-FSLSNIKNHQHEYLEKINKHKGLGFYFFFHEDEEKFYLMESK---KL-------NNLTKKSISIEQIKKNALQI 137
71894499   79 S-NEDKFILKNIKQHQLEYLILMQSHGAIAFFVFYFSKQNEFYKVDPM----YIDS---ELKKNKKSLHFKEIKENSIKI 150
193216659  82 TEDEN-FSLKNVKKHQLEYLDLVLWHGGLAFWIIYFKIQNEFILVGHE---TFr-----KMIQNKKTLNFYVLKAKGVIL 152
240047249  69 T-NENLLNIKQIPDHQIQYLEQIRKHKGCAFFIIFFKQYEQFFILDIS---KF--------DKTEKSISVDFLKKNGIEV 136
269114944  80 TEQKN-FEKKNIKKHQIEYLNKVVLHQGIAFWIIYFKFQNEFLLIEHA------NFKkcLFEEKKSYIFFETIKSLGKEI 152
291320509  78 T-NESFLARSNIKEHQKKYLKEIHKNGGLAFLIVFFGLYDEFYLLSYE---SF------MTIENKNQYRYEWIKKIGKRI 147
294155858  78 T-NIDKLELSNIKEHQIDYLKIIYDNGGFPFFVIFFSKDNKVYILSIKnylEI-------IKDGKKYISQETIKNYSINV 149
304373202  76 T-NENKLSLNIIPKHQINYLKKINQHFGCAFFVILFKTEERFFLISID---KI-------DFAKQKSLTIEYLTKNGFEL 144
116492697 181 EYQMNPLIPYLKAVDKIIEN 200
71893409  144 PLTYPGIIDFIGYIDQMI-- 161
15828557  138 ELSFPGIVDFLPWVKSLINN 157
71894499  151 ELNFPGVLNLLQ-------- 162
193216659 153 ELQYPGILDYICFARKRFD- 171
240047249 137 ILTYPGIIDFVEHIGSMV-- 154
269114944 153 KLIFPGILDFLNILK----- 167
291320509 148 PLTYPGIIDFLPYIys---- 163
294155858 150 EITFPGIIDFLPLIKFIF-- 167
304373202 145 MLTYPGIIDFVEFIDKML-- 162
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