Conserved Protein Domain Family
c550_PedF

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TIGR04494: c550_PedF 
cytochrome c-550 PedF
Members of this family are c-type cytochromes with some remote similarity to the sulfur oxidation cytochrome SoxX.
Statistics
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PSSM-Id: 275287
Aligned: 18 rows
Threshold Bit Score: 208.79
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
ZP_08636771   25 GAIALAALLASPLAWSHGSVTPQAVDIKDLERL---GDEWREENPYRdhpQ--QELAIDIGARAYNSNCAACHGLEAKSG 99  Halomonas sp. TD01
ZP_01304500   14 GALAVLAGTTASQLLAHGDVTPQAVDTSALPDI---GEEWLEKNPYS---G--NAKAIEIGQSAYGQNCARCHGLDAESG 85  Sphingomonas sp...
ZP_03697014   10 TLALAGSLTLLGTAYGHGNVTPQPVDTGNLKKL---GSEWLDSNPYR---G--DADAIRIGHSAFAQNCARCHGIDAISG 81  Pseudogulbenkia...
ZP_08209840   21 GAMVAATMGVSTQLLAHGNVTPQPVDTSALPDIkpdNDTWLTHNPYR---G--NAKAIEIGQSAYGQNCARCHGLDAISG 95  Novosphingobium...
WP_013136599   8 GLTVLLSTVF---AYGHGDVVPQPVDTKGLKPL---GKEWLETNPYV---G--NKKAIEIGKHGYEENCARCHGLEVVSG 76  Arcobacter nitr...
WP_008952536  10 TLALAGSLTLLGTAYGHGNVTPQPVDTGNLKKL---GSEWLDSNPYR---G--DADAIRIGHSAFAQNCARCHGIDAISG 81  Pseudogulbenkiania
WP_012762480  26 sacallaGGLPAAVSAHGDVTPQAVDTHTLPQL---GADWRQDNPYRt--GpaHDEALRIGSSAFNQNCARCHGLEAISG 100 Ralstonia picke...
WP_004631184  12 sacallaGGLPAAASAHGDVTPQAVDTHTLPQL---GADWRQDNPYRt--GpaHDEALRIGTSAFNQNCARCHGLEAISG 86  Betaproteobacteria
WP_004324237  33 tatgialaaasalahahGDVTPQAVDTSSLKQL---GGTWVTVNPYR---G--NKEAIRIGDSAFNQNCARCHGLGAVSG 104 Thauera aminoar...
WP_011800150  25 AVLLMAACLLTGTAMAHGDVVPQSVNTTTLPPL---GEKWLPANPYSe--GpaHKEALRIGTSAYNQNCARCHGLEAISG 99  Polaromonas nap...
ZP_08636771  100 GIAPDLRELENGAWG--------------DEWFKELVTNGAERNGRVLMPRMSDYVSQEGLWAIRTWLETVSME 159 Halomonas sp. TD01
ZP_01304500   86 GIAPDLRYLEQGESG--------------DQWFAERYRHGSSHDGKVYMPPFGDVLGQKTGWAIRAWLETKFEG 145 Sphingomonas sp. SKA58
ZP_03697014   82 GIAPDLRQLPAGEEG--------------DAVFQGRIRHGSIRNGVTYMPPFEGILSQEAAWAIRSWLDTVHQE 141 Pseudogulbenkiania fe...
ZP_08209840   96 GIAPDLRYLELGDSG--------------DEWFVQRYHHGSSHDGKVYMPPMGEVLGQKAGWAIRAWLETKHTD 155 Novosphingobium nitro...
WP_013136599  77 GIAPDLRYLDTGADG--------------DEWFMERIRGGAVRNGNVYMPPFEGILSQEAMWAIRSFIVSKHTE 136 Arcobacter nitrofigilis
WP_008952536  82 GIAPDLRQLPAGEEG--------------DAVFQGRIRHGSIRNGVTYMPPFEGILSQEAAWAIRSWLDTVHQE 141 Pseudogulbenkiania
WP_012762480 101 GIAPDLRKLDTDCMSladakkkeacygevSQYFTATVRHGRTRDGRVYMPPFDGVLSQEAVWSIKTYLESRRVQ 174 Ralstonia pickettii
WP_004631184  87 GIAPDLRKLDTDCMSlasakqkeacygevSQYFTATVRHGRTRDGRVYMPPFEGVLTQEAVWSIKTYLESRRVQ 160 Betaproteobacteria
WP_004324237 105 GIAPDLRLLDVADDGt-------------DEFFIGKVRNGVTRNGAVYMPPFEGMLTQEAMWAIRAWLETVHEN 165 Thauera aminoaromatica
WP_011800150 100 GIAPNLRKIDGDCMGladaakkmacyketDEFFLGTVRRGRVRDGRVYMPPFEGILNQEAIWAIKTYLETRREP 173 Polaromonas naphthale...
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