Conserved Protein Domain Family
circ_ocin_uber

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TIGR03651: circ_ocin_uber 
circular bacteriocin, circularin A/uberolysin family
Circular bacteriocins are antibiotic proteins made by ribosomal translation of a precursor molecular, followed by cleavage and circularization. Members of this subclass of the circular bacteriocins include circularin A from Clostridium beijerinckii, bacteriocin AS-48 from Enterococcus faecalis, uberolysin from Streptococcus uberis, and carnocyclin A from Carnobacterium maltaromaticum. The mature circularized peptides average about 70 amino acids in size. [Cellular processes, Toxin production and resistance]
Statistics
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PSSM-Id: 274700
Aligned: 9 rows
Threshold Bit Score: 34.0012
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
CAD97580       2 FLVAGALGVQTAAATTIVNVILNAGTLVTVLGIIAS-IASGGAGTlMTIGWATFKATVQK-LAKQSMARAIAY 72  Clostridium beijerinckii
CAD30170       2 FEIMGYFGVDRGWATKIVNAIDAVGWGVAAASAIAAiVTAGGLAV-TSAMIDVAIFTVKDfLRRNLKAQAVAW 73  Bacillus thuringiensis...
CAA56076      34 AHMAKEFGIPAAVAGTVLNVVEAGGWVTTIVSILTA-VGSGGLSLlAAAGRESIKAYLKKeIKKKGKRAVIAW 105 Enterococcus faecalis
ABG48503       5 LELAGYTGIASGTAKKVVDAIDKGAAAFVIISIISTvISAGALGA-VSASADFIILTVKNyISRNLKAQAVIW 76  Streptococcus uberis
WP_011916106   2 LFVAATLGIPETLATTIVNIILTGSTIVSIILALTSiLTAGVSAViLAGGWTAFINLVKSkVAQLGLRGAILW 74  Caldicellulosiruptor s...
WP_011230222   5 ALVAGTLGVSQSIATTVVSIVLTGSTLISIILGITAiL-SGGVDAiLEIGWSAFVATVKKiVAERGKAAAIAW 76  Geobacillus kaustophilus
WP_007613518  47 AELASTLGISTAAAKKAIDIIDAASTIASIISLIGIvTGAGAIS-------YAIVATAKTmIKKYGKKYAAAW 112 Bacillus
WP_011591825   3 MKVAALLGISSNWAMKIVDLIATGASIWAIAAAVAA---SGGI---LAIGIVVLRELVMKkIKQVGYAAAVTY 69  Clostridium perfringens
WP_025093875  31 SLIAANLGVSTATAATVVNFLDTWSSVATVITIVGVfTGVGTISSgVAATILAI-------LKKQGKAKAAAF 96  Bacillus pumilus
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