2NP3


Conserved Protein Domain Family
TetR_C_16

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pfam17920: TetR_C_16 
Tetracyclin repressor-like, C-terminal domain
TetR family regulators are involved in the transcriptional control of multidrug efflux pumps, pathways for the biosynthesis of antibiotics, response to osmotic stress and toxic chemicals, control of catabolic pathways, differentiation processes, and pathogenicity. The TetR proteins identified in overm ultiple genera of bacteria and archaea share a common helix-turn-helix (HTH) structure in their DNA-binding domain. However, TetR proteins can work in different ways: they can bind a target operator directly to exert their effect (e.g. TetR binds Tet(A) gene to repress it in the absence of tetracycline), or they can be involved in complex regulatory cascades in which the TetR protein can either be modulated by another regulator or TetR can trigger the cellular response. This entry represents the C-terminal domain found in a number of different TetR transcription regulator proteins found in Actinobacteria. TetR regulates the expression of the membrane-associated tetracycline resistance protein, TetA, which exports the tetracycline antibiotic out of the cell before it can attach to the ribosomes and inhibit protein synthesis. TetR blocks transcription from the genes encoding both TetA and TetR in the absence of antibiotic. The C-terminal domain is multi-helical and is interlocked in the homodimer with the helix-turn-helix (HTH) DNA-binding domain.
Statistics
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PSSM-Id: 465568
Aligned: 74 rows
Threshold Bit Score: 67.1978
Created: 26-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2NP3_A             101 DGIGERVVRAHLSVWDdVSSRPALXTXVRSAaIHRAAAARLRETATGILARALGGVITGE-DAXLRTSXVATQLVGLAXX 179 Streptomy...
WP_081766250        88 ETLGERLVRYVIDTEY--EVRGVYLALVRAS-DAGDVASALHLAHDHNFVEPLRAILTGS-DADLRARLVAAAVGGLMST 163 Microbact...
KQO64305            74 DTLGERFIRYVLEAGP--QVRAMFLAILRAS-DSDNIGVELRRQHELGFVGPLRARLGGA-DADLRASLAASLVAGLLYA 149
KUL39141            74 AEFGPRFVARLLADDD---IRGVYLALVRGS-NEPQIKERLQAIHEHTFVGPLRARLTGP-DADLRARLAAAVIGGLLYA 148
WP_056706395        96 ETVGRRLVAYLIDTDN-ASIRGRFVAIARGS-HLAQVRDEMVRHTAEAYIAPLAPRLDGE-DREVRVALVAAQVAGLLNL 172 unclassif...
BAL86945            74 ESIGRELVRFVLDASD-RPVAGIYRAMLTAS-DRPEIKQRLRSSMHDVFVAPLADRIGGA-FPELRARLVAAQFAGLINA 150
CeBiTec:B446_04385  89 EELGRHMVRHVLASQR-ERGADPLLRIAFAP-LHGDHGDVLRANFRAQVTERLAGRLPGP-DAGLRAELAVAALLGLGVM 165
GAT65987            78 EELPRRLAEYVAERLRsDRGSPVLEALARSS-ASPEIHGILRDRVNSAIMEPLAARLSGA-DARLRAAVATALVTGSGTF 155
WP_050066031        71 ESVGCQLVRRVVDRRD-NGEPDALSMAPTLI-HESDDPDTVRDGIRTRYVAAVAERIGDAgAGHVRSQLVLTTLLGLAGA 148 Rhodococc...
WP_045075845        66 EPLGFQLARRLVERRE-TGQPEPWAMAPIRV-HDSPDRELAREETRNKYLGWLSERLGPQ---QQKAELVMALLIGFGSG 140 Psychromi...
2NP3_A             180 RYVAHLEPLASADTDTVARHYGRAVQAIV 208 Streptomyces coelicolor
WP_081766250       164 LWLVRDTALLDADPEALIRTYATAIQQLV 192 Microbacterium sp. C448
KQO64305           150 LWVVGDEQLLAADHEEIVAKYGRLMQELV 178
KUL39141           149 LWVVSDEQLVATAPETLITHYGALLQQLI 177
WP_056706395       173 LFLQEDPVLSTAAPETLVALYGDAIQQLL 201 unclassified Nocardioides
BAL86945           151 YWLVADPVLSRADRPAIVALYGDAIQRLL 179
CeBiTec:B446_04385 166 YGIARGPHLRETGTDAIADRYGPLVQAHL 194
GAT65987           156 RQLYGPEAIELPEHEAVVERLTRMFQVCL 184
WP_050066031       149 MRHVGLLTPDVVEREELIRRYGALVQAVI 177 Rhodococcus sp. RD6.2
WP_045075845       141 MRSIGL--FAEVPAEELIQRYGAILQQII 167 Psychromicrobium lacuslunae
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