1WYZ


Conserved Protein Domain Family
RsmI

?
COG0313: RsmI 
16S rRNA C1402 (ribose-2'-O) methylase RsmI [Translation, ribosomal structure and biogenesis]
16S rRNA C1402 (ribose-2'-O) methylase RsmI is part of the Pathway/BioSystem: 16S rRNA modification
Statistics
?
PSSM-Id: 440082
Aligned: 959 rows
Threshold Bit Score: 138.6
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
?
Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
1WYZ_A         5 LYLLPVTLGDt-pL-EqVLPSYNTEIIRGIR-------HFIVEDVRSARRFLKKvdreIDIdSLT-------FYPLNKHT 68 
WP_013943447   5 LILLPNALDPeldSrG-FITPVLSDVVPLLT-------GIIAESEKGARVFLKR----FSY-EEPktfrdvpIHLLNEHS 71 
WP_013182055   5 LLLLPNLLGNhkhHeL-FLPPSVDKAVASIH-------GLIAESVKEGRRYLSR----FQL-EKPphe--ipLALCNKHT 69 
WP_006339800   5 LLLLPNLLGElpqHqF-FLPASVDQAVESID-------GLIAESEKAGRRYLGR----FQT-KRPare--ipIALLNKNT 69 
WP_012388123   4 LYLVSNSIGN---D-L-DLPPRTKQLLEDAD-------WILGEEQRTTSTLLKK----LGI-SKP-------FDLLNEHT 59 
NP_224582      3 LYLLPNTLGTra--vE-TLPSVIGELVHRLD-------GLIVESDRGGRAFLSL----WKI-P-Evhk--fpLAILSKHA 64 
WP_014244116   5 LFLIPTPIDE---E-S-PLEKCALDMLLKACekp-denIFIIEDLKPGRRRWLR----FGL-PRErv---esFTLFNEHT 70 
WP_102243448   7 LTLIPTPLSE---E-G-ELEPRAFRLLNEAAtnerensVFVIEDLKPGRRRWLG----FKL-PREcv---esFVLYNEHT 73 
WP_013450607   2 LIVAGIPLDE---EyH-NLPDNLKDIARSSD-------FVIGEEKKNVLKFLAR----SDArGKE-------FILLNEHT 59 
WP_114983921  13 LFLIPTPLSRt-gEnT-TLPAATLEIARSLD-------HFAVENIRQAASFLQW----IQH-PVPefe--vhFFPLSKST 76 
1WYZ_A        69 SPEDI-SGYLKP-LAGGASXGVISEAGCPAVADPGADVVAIAQRQKLKVIPLVGPSSIILSVXASGFNGQSFAFHGYLPI 146
WP_013943447  72 TNEDL-QHLLKL-LKGGGSWGLISDCGLPVLADPGAQLVQLARRENIPVQAYPGPSSIVLALMLSGLSGQAFTFHGYLPR 149
WP_013182055  70 RSDEI-DFLLEP-LKKGERWGIVSDCGLPCLADPGARLVKRARELGIAVKAFVGPSSIVLALMLSGLSGQNFSFHGYLDK 147
WP_006339800  70 PDEDC-DFLLEP-IRKGERWGLVSDAGLPCIADPGYLLVRRARQLGISIQTFTGPSAFVMALILSGLPGQSFSFHGYVPK 147
WP_012388123  60 TKSEM-DEIGMK-LAMTKRTCLISDSGSPGLEDPGKWLVPLAWDMGVEVRSAPGPTALISALTSSGFATSPFLFLGFLPR 137
NP_224582     65 RLPKAwDFYLEPiVKHGENWGLISDAGLPCIADPGASLVRRARALGIPVQAFSGPCSITLALMLSGLPSQSFTFLGYLPQ 144
WP_014244116  71 RRDEL-PKIMSA-LKSGKNAYIMSDGGLPAFCDPGVELVRSCHQENIRVSASPFANSISLALALSGLDHNKFSFGGFLPI 148
WP_102243448  74 AQTVS-KELLAE-LQKGKNVFLMSDGGLPAFYDPGVELVNLCHQNKIRVTSTPFFNSVSLALALSGFSHRKFWFEGFLPI 151
WP_013450607  60 EERDY-FDIVDR-VKNAGKVLFFSDGGTPCVADPGYKFIDLCHNAGVSIVPYPGPSSITAALSISGFYAERFYFAGFLPK 137
WP_114983921  77 SELRL-QEYVNL-MLNGTDLGVLTDAGCPGVADPGADLVKQAHKFGIKVVPLTGPASPILALMGLGLGGQKFAFSGYLPS 154
1WYZ_A       147 EPGERAKKLKTLEQrvyaESQTQLFIETPYRNHKXIEDILQN-CRP-QTKLCIAANITCEGEFIQTRTVKDWKGHI---- 220
WP_013943447 150 EPKPLKNKVALIEKl---KDQSHIFIEAPYRTEKLLSVLLEE-LSD-ETTLCVAWNLTLPDQEVIVKKVKGWKKGLv--- 221
WP_013182055 148 NDKQMRKQIQQLER----MPATHIVMERPYQNQKTLEALIET-LDE-STQLCIAWELTNPDQGILTQPVKLWRKSPl--- 218
WP_006339800 148 EPGDREKKVKEFENnsirTNATQIFMDAPHRNQHTLETLLNT-LQD-STLLCAAWDLTLPSQGIVTQPIRSWKKMPl--- 222
WP_012388123 138 EEKERERTLKQYIG----LGITIAFYETPYRAKHCLETLAKL-LPH-DRRIFLSLGISFAHETSFRGSAKEVQKKF---- 207
NP_224582    145 SPKERVKSIKKAATs--kEVSTSVCIETSYRNVYTFESLLDT-LPS-YAELCVASDLSGPSELVLTRQVQSWRTTEdlgs 220
WP_014244116 149 KDPERSEELKLLTQ----RRETLILMDTPYRMKKLLEEVQSLrLG---RVCFLAMDLNCPSEELLYGKIEKIISKI---- 217
WP_102243448 152 DSEERAKAIKNILN----LKTTAIVMDTPYRLKRVLEEFQSA-WGSsKKKLFVAMDLNAETEELQRGTPKELLNVI---- 222
WP_013450607 138 DRSLYKKFAEKIDI----IGETTVIFERPYGIKNIIEFVKLI---K-KRKICITINIGKPDFYYIRGTVEDICNCL---- 205
WP_114983921 155 KAEARATMLRELEQhsaqSGSTELFMETPFRNLETLKAATST-LRM-DTQLGVAANLTSPDELIIMCEVSEWQRRKf--- 229
1WYZ_A       221 --PEl--sKIPCIFLLY 233
WP_013943447 222 --PDl--kKKPAVFVVG 234
WP_013182055 219 --PNl--eKRNALFLFQ 231
WP_006339800 223 --PNl--aKKNVVFLLH 235
WP_012388123 208 --PQg--mKLPPVFVIE 220
NP_224582    221 vkQSi--tKVPTIFLFH 235
WP_014244116 218 --SDf---KREFILILG 229
WP_102243448 223 --NDv---KREFVLIVS 234
WP_013450607 206 --SDkkniKYPFVTIID 220
WP_114983921 230 --PDi--qKIPAIFGLK 242
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap