6G3T,6G24,6G3P


Conserved Protein Domain Family
PWWP_NSD3_rpt1

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cd20163: PWWP_NSD3_rpt1 
Click on image for an interactive view with Cn3D
first PWWP domain found in nuclear SET domain-containing protein 3 (NSD3) and similar proteins
NSD3, also called histone-lysine N-methyltransferase NSD3, protein whistle, WHSC1-like 1 isoform 9 with methyltransferase activity to lysine, or Wolf-Hirschhorn syndrome candidate 1-like protein 1 (WHSC1-like protein 1, or WHSC1L1), is a lysine methyltransferase encoded by gene NSD3, which is amplified in human breast cancer cell lines. Moreover, translocation resulting in NUP98 fusion to NSD3 leads to the development of acute myeloid leukemia. NSD3 contains a catalytic suppressor of variegation, enhancer of zeste and trithorax (SET) domain, two proline-tryptophan-tryptophan-prolin motif (PWWP) domains, five plant-homeodomain (PHD) zinc finger motifs, and an NSD-specific Cys-His rich domain (C5HCH). The SET domain is responsible for histone methyltransferase activity. The PWWP and PHD domains are involved in protein-protein interactions. This model corresponds to the first PWWP domain. The PWWP domain specifically recognizes DNA and histone methylated lysines.
Statistics
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PSSM-Id: 438991
Aligned: 9 rows
Threshold Bit Score: 252.931
Created: 9-Jan-2019
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 5 residues -Click on image for an interactive view with Cn3D
Feature 1:putative DNA binding site [nucleic acid binding site]
Evidence:
  • Comment:Based the structure evidence that Homo sapiens NSD2 (5VC8) binds DNA.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                         
6G3T_A         23 FQVGDLVWSKVGTYPWWPCMVSSDPqlEVHTKINTRGAREYHVQFFSNQPERAWVHEKRVREYKGhkQYEELLAEATKQa 102  human
6G24_A          6 FQVGDLVWSKVGTYPWWPCMVSSDPqlEVHTKINTRGAREYHVQFFSNQPERAWVHEKRVREYKGhkQYEELLAEATKQa 85   human
6G3P_A         23 FQVGDLVWSKVGTYPWWPCXVSSDPqlEVHTKINTRGAREYHVQFFSNQPERAWVHEKRVREYKGhkQYEELLAEATKQa 102  human
XP_005155379  353 YEIGDLVWAKVGTYPWWPCMVSSDPqsNVHTRINTRGCKEYHVQFFGSVPERAWIHEKRTVVYKSenQFDELQAETLRKs 432  zebrafish
KYO34267      259 FQIGDLVWSKVGTYPWWPCMVSCDPqlEVHTKINTRGAREYHVQFFSNQPERAWVHEKRVREYKGhkQYEQLLAEAAKQa 338  American alli...
XP_014346516  301 YQVGDLVWSKVGTYPWWPCMVSLDPqlQVHTKTNARGGREYHVQFFGSIPERAWVYEKRVQEYKGhsQYDQLLAEAARKa 380  coelacanth
OCT86470      264 FHVGDLVWSKVGTFPWWPCMVSCDPqlHVHSKINTRGAREYHMQFFSSEPERAWVHEKRMREYRGeqQYEQLAAEDSAKa 343  African clawe...
XP_007909379  239 YQIGDLVWSKVGTYPWWPCMVSSDPllQIHTKINTRGAREYHVQFFGSIPERAWVHEKRVAPYKGcsQYEILVAETARQa 318  elephant shark
Q9BZ95        268 FQVGDLVWSKVGTYPWWPCMVSSDPqlEVHTKINTRGAREYHVQFFSNQPERAWVHEKRVREYKGhkQYEELLAEATKQa 347  human
Feature 1          ###  ##                                          
6G3T_A        103 sNHSEKQKIRKPRPQRERAQWDIGIAHAEKALKMTREERIEQYTFIYIDK 152  human
6G24_A         86 sNHSEKQKIRKPRPQRERAQWDIGIAHAEKALKMTREERIEQYTFIYIDK 135  human
6G3P_A        103 sNHSEKQKIRKPRPQRERAQWDIGIAHAEKALKXTREERIEQYTFIYIDK 152  human
XP_005155379  433 tNPTEKQKLLKPQSQKERAQWEVGVGHAEAALQMTREERNENYTFIYIDK 482  zebrafish
KYO34267      339 sNHSEKQKIRKPRPQRERAQWDIGIAHAEKALKMTREERIEQYTFIYVDK 388  American alligator
XP_014346516  381 tNHAEKQKILKPIPQRERAQWEVGIAHAEEALKMTKEARIEQYTFIYVDE 430  coelacanth
OCT86470      344 cNQSDKLKMKKPRPQRERVQWEIGIAHAEKALRMTREERIEQYTFIYVDE 393  African clawed frog
XP_007909379  319 sSTAEKQKILKPIAQRVRPQWDVGIAQVEEALKMTLEDRIAQYTFIYVDP 368  elephant shark
Q9BZ95        348 sNHSEKQKIRKPRPQRERAQWDIGIAHAEKALKMTREERIEQYTFIYIDK 397  human

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