Conserved Protein Domain Family
LPD28

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pfam18843: LPD28 
Large polyvalent protein associated domain 28
This is a beta strand rich domain that lacks strongly conserved polar residues. It is fast diverging and is found in polyvalent proteins of conjugative elements.
Statistics
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PSSM-Id: 436775
Aligned: 54 rows
Threshold Bit Score: 74.134
Created: 27-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_046442529   8 WEETYEEVTVLGKTMLFTNARID--RSTVPKGMYLYEVRHDDEgRGDPCEIARAVMVNHWGTLITNEPIR-LKKspvtqN 84  Christensenella
EFW04546       2 RKETFEFYEFKGRKVLFTPARARylEEPVPEGLFKYEIRHSDE-GFEPCVLAKHILVNHYGTIFSRVPID-LGE-----R 74 
WP_004800346   7 DKLRCEPIKLFNKEVLYADLRVN--NLHLPDNIYRYELRHDDKcQGILCEIAHRILVNFQGTILSDKKIN-LGK-----Q 78  Amedibacillus d...
EOS81645       6 NELRYEQAKVLEKEAIFTELRVL--RDSVPKGFSCYEVRHDDEcQGNPVEIAKGILVNFYGTLLVQESLEqVEK-----E 78 
EOS40135       6 EELRYERVRIFEKEAFFTCDRIQ--EDSVPEGLYQYEVRHDDDgFGNPVQIAKGILVNFYGSLLCRDKLE-DEEt----Q 78 
EOS69480       6 KELSYEKVEVFGEKAIFTDVRVE--RRSVPKGLYQYEVRHDDEsFGYPVEIAKGILVNFYGTLLTKNRLHgVEE-----H 78 
CBK98652       6 MTERYEEIMVCGKPALFTNFRIK--RDTVPDSLYVYDVRHDDEcRGIPCEIAPFIMVNHWGTIILAEPLE-LPD-----D 77 
WP_110940787   7 MEESFEEIGLFGKPALFTPIRID--RNTVPKGLYLYEVRHDDEsQGDPVQIGKGILVNHSGTVITCEKLR-LDK-----D 78  Geosporobacter ...
WP_072525217   7 MEETFTEVRVLGKPALFHDLRID--RSTVPKGLYLYEVRYDDEgLGDPVQIAKGIMVNHFGSIITREPIR-LPP-----D 78  Eubacteriales
WP_008787751  12 YDILFEPILYKNHLCLITELPIH--IKQIKKPFYVYSIHYVDH-YGSFEMITNNCATNRVATLITCKKIN-LIE-----N 82  Erysipelotrichales
WP_046442529  85 AYREIDPQkDWNYE-GG--------SCNLQEYMK 109 Christensenella
EFW04546      75 GYIDFSEDiDFIDL-NQ--------IMTFDEYLS 99 
WP_004800346  79 GYRLIDEDkDIQYLdKD--------NMTVNDYLH 104 Amedibacillus dolichus
EOS81645      79 GRCFLERE-DWNYSgER--------SFTLEEYME 103
EOS40135      79 GSIYLSEE-DWCWMsDR--------SITLDELLR 103
EOS69480      79 GWMLVEDE-EWYYIgER--------NCTLEEYLK 103
CBK98652      78 GRRYIDEEtDWNYDpFGgaeknqkpCVTVEEFIK 111
WP_110940787  79 GFLNIEPD-DFNFSaGD--------CRTIKDFQE 103 Geosporobacter subterraneus
WP_072525217  79 GYLEIDPEkDWDFCdGD--------CRTVQKFME 104 Eubacteriales
WP_008787751  83 LYLEIKDT-DFKRLyKP--------KLSLSEYSN 107 Erysipelotrichales
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