Conserved Protein Domain Family
ntrC

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TIGR01818: ntrC 
nitrogen regulation protein NR(I)
This model represents NtrC, a DNA-binding response regulator that is phosphorylated by NtrB and interacts with sigma-54. NtrC usually controls the expression of glutamine synthase, GlnA, and may be called GlnL, GlnG, etc. [Central intermediary metabolism, Nitrogen metabolism, Regulatory functions, DNA interactions, Signal transduction, Two-component systems]
Statistics
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PSSM-Id: 273818
Aligned: 7 rows
Threshold Bit Score: 725.762
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
P45671         6 ILVADDDRAIRTVLTQALARLGHEVRTTGNASTLWRWVADG-QGDLIITDVVMPDENGLDLIPRIKKIRPDLRIIVMSAQ 84  Azospirillum br...
P06713         6 VWVVDDDSSIRWVLERALAGAGLTCTTFENGAEVLEALASK-TPDVLLSDIRMPGMDGLALLKQIKQRHPMLPVIIMTAH 84  Escherichia coli
AAC41399       4 VWIIDDDPSIRWVLEKALTQADILVRSFADADSALRALGRE-QPGAVVTDLRMPGLDGLAFLREVQSRWPKLPVIVMTAH 82  Acidithiobacill...
P10576         6 ILVADDDTAIRTVLNQALSRAGYEVRLTGNAATLWRWVSQG-EGDLVITDVVMPDENAFDLLPRIKKMRPNLPVIVMSAQ 84  Bradyrhizobium ...
WP_001884076   8 VWVVDDDSSIRWVMEKTLSSAHIKCETFADAESVLLALERE-TPDVLVSDIRMPGMDGIALLNQVHQRTPELPVIIMTAH 86  Vibrio cholerae
WP_003096036   9 VWIVDDDRSIRWVLEKALQQEGMTTVSFDSADSVIGRLGRQ-QPDVIISDIRMPGASGLDLLAQIRELHPRLPVIIMTAH 87  Pseudomonas aer...
WP_011035445  11 IWVVDDDRSVRFVLSTALRDAGYAVDGFDSAAAALQALAMRpTPDLLFTDVRMPGEDGLTLLDKLKSKHPQLPVIVMSAY 90  Xanthomonas cam...
P45671        85 NTLITAVKAAERGAFEYLPKPFDLKELVSVVERALNSNTPPAALPADAgEADEQLPLIGRSPAMQEIYRVLARLMGTDLT 164 Azospirillum br...
P06713        85 SDLDAAVSAYQQGAFDYLPKPFDIDEAVALVERAISHYQEQQQPRNVQ-LNGPTTDIIGEAPAMQDVFRIIGRLSRSSIS 163 Escherichia coli
AAC41399      83 SDLDNAVAAFQSGAFEYLPKPFDMDEAVTLVQRALGSRAGPGAAGVEE---SDPAEMIGEAPAMQEVFRAIGRLSRSQIN 159 Acidithiobacill...
P10576        85 NTFMTAIRPSERGAYEYLPKPFDLKELITIVGRALAEPKERVSSPADDgEF-DSIPLVGRSPAMQEIYRVLARLMQTDLT 163 Bradyrhizobium ...
WP_001884076  87 SDLDAAVNAYQQGAFEYLPKPFDVDETLTLVERAIAHGQEQRKTSHRPsENYSAPEIIGEAPAMQEVFRAIGRLSRSSIS 166 Vibrio cholerae
WP_003096036  88 SDLDSAVASYQGGAFEYLPKPFDVDEAVSLVKRANQHAQEQQGLELPAn-QARTPEIIGEAPAMQEVFRAIGRLSHSNIT 166 Pseudomonas aer...
WP_011035445  91 TDVASTAGAFRGGAHEFLSKPFDLDDAVALAARALPDADAAVEDTLGTpVAEGSAALIGDTPAMQALFRAIGRLAQAPLS 170 Xanthomonas cam...
P45671       165 VTITGESGTGKELVARALHDYGKRRNGPFVAINMAAIPRELIESELFGHEKGAFTGATNRSTGRFEQAQGGTLFLDEIGD 244 Azospirillum br...
P06713       164 VLINGESGTGKELVAHALHRHSPRAKAPFIALNMAAIPKDLIESELFGHEKGAFTGANTIRQGRFEQADGGTLFLDEIGD 243 Escherichia coli
AAC41399     160 VLITGESGSGKELVASALHRHSPRARGPFIAINTAAIPAELLESELFGHEKGAFTGAVQTRQGRFEQASGGTLFLDEIGD 239 Acidithiobacill...
P10576       164 VMISGESGTGKELVARALHDYGRRRNGPFVAVNMAAIPRDLIESELFGHERGAFTGANTRASGRFEQAEGGTLFLDEIGD 243 Bradyrhizobium ...
WP_001884076 167 VLINGESGTGKELVAHALHRHSPRAQKPFIALNMAAIPKDLIESELFGHEKGAFTGANTVRQGRFEQANGGTLFLDEIGD 246 Vibrio cholerae
WP_003096036 167 VLINGESGTGKELVAHALHRHSPRAASPFIALNMAAIPKDLMESELFGHEKGAFTGAAAQRRGRFEQADGGTLFLDEIGD 246 Pseudomonas aer...
WP_011035445 171 VLINGETGTGKELVARALHNESPRSRKPFVALNTAAIPAELLESELFGHETGAFTGATKRHIGRFEQADGGTLFLDEIGD 250 Xanthomonas cam...
P45671       245 MPLEAQTRLLRVLQEGEYTTVGGRTPIKTDVRIVAATHRDLRTLIRQGLFREDLFYRLCVVPIRLPPLRERTEDVPLLVR 324 Azospirillum br...
P06713       244 MPLDVQTRLLRVLADGQFYRVGGYAPVKVDVRIIAATHQNLEQRVQEGKFREDLFHRLNVIRVHLPPLRERREDIPRLAR 323 Escherichia coli
AAC41399     240 MPAALQTRLLRVLSDGTFYRVGGHAPQRADVRVLAATHQNLEAKVRDGSFREDLYHRLNVIHIHLPPIRERREDIPRLAR 319 Acidithiobacill...
P10576       244 MPMEAQTRLLRVLQQGEYTTVGGRTPIKTDVRIVAASNKDLRILIQQGLFREDLFFRLNVVPLRVPPLRERIEDLPDLIR 323 Bradyrhizobium ...
WP_001884076 247 MPLDIQTRLLRVLADGQFYRVGGHVAIKVDVRIVAATHQNLEKLVHQGKFREDLFHRLNVIRIHIPSLRERRQDIEKLTK 326 Vibrio cholerae
WP_003096036 247 MPADTQTRLLRVLADGEFYRVGGHTPVKVDVRIIAATHQNLESLVRDGKFREDLFHRLNVIRIHIPRLADRREDIPALAR 326 Pseudomonas aer...
WP_011035445 251 MPLPLQTRLLRVLAENEFFRVGGRELIRVDVRVIAATHQDLEALVEQGRFRADLLHRLDVVRLQLPPLRERRGDIAQLAE 330 Xanthomonas cam...
P45671       325 HFLNQCSAQG-LPVKSIDQPAMDRLKRYRWPGNVRELENLVRRLAALYSQEVIGLDVVEAELaDT-TPAAQPVEEp--qG 400 Azospirillum br...
P06713       324 HFLQVAARELgVEAKLLHPETEAALTRLAWPGNVRQLENTCRWLTVMAAGQEVLIQDLPGEL-FEsTVAESTSQMq---P 399 Escherichia coli
AAC41399     320 HFLRRSAEQLdVERRILSPERVAFMN-WHWPGNVRQLENVCRWITVMAPTREVQVTDLPPEMaASpMSAMMPDPN----T 394 Acidithiobacill...
P10576       324 HFFSLAEKDG-LPPKKLDAQALERLKQHRWPGNVRELENLARRLAALYPQDVITASVIDGELaP---PAVTSGSTatvgV 399 Bradyrhizobium ...
WP_001884076 327 HFLALAAKELgVEMKTLNPRTVDILTKLDWPGNVRQLENMCRWLTVMASGSEVLPSDLPSEL-LSeRKASHFDNDi---- 401 Vibrio cholerae
WP_003096036 327 HFLSRAAQELaVEPKLLKAETEEYLKNLGWPGNVRQLENTCRWITVMASGREVHIDDLPPEL-LTqPQDSAPAAN----- 400 Pseudomonas aer...
WP_011035445 331 NFLAMAGRKLdMLPKRLSSAALEALRQYDWPGNVRELENVCWRLAALATADTIDVVDVDAALaRGgRRVRAGRSDg---Q 407 Xanthomonas cam...
P45671       401 EGLSAAVERHLKDYFAAHkdgmpSNGLYDRVLREVERPLISLSLSATRGNQIKAAQLLGLNRNTLRKKIRDL 472 Azospirillum brasilense
P06713       400 DSWATLLAQWADRALRSG-----HQNLLSEAQPELERTLLTTALRHTQGHKQEAARLLGWGRNTLTRKLKEL 466 Escherichia coli
AAC41399     395 QDWRLLLGAVVRHVSRR------EEALLDKIQPLFERCLLEAALQHTRGHKQSAAHKLGWGRNTLTRKLKEL 460 Acidithiobacillus ferro...
P10576       400 DNLGGAVEAYLSSHFSGFpngvpPPGLYHRILKEIEIPLLTAALAATRGNQIRAADLLGLNRNTLRKKIRDL 471 Bradyrhizobium sp. RP501
WP_001884076 402 -SWQKQLETWAKSALASG-----ETELLAYALPEFERILLEAALHHTNGHKQEAAKVLGWGRNTLTRKLKEL 467 Vibrio cholerae
WP_003096036 401 --WEQALRQWADQALGRG-----QSNLLDSAVPAFERIMIETALKHTAGRRRDAAVLLGWGRNTLTRKIKEL 465 Pseudomonas aeruginosa
WP_011035445 408 --WDEMLSSWAAQRLSEG-----AQGLHAEARERLDKTLLEAALQLTQGRRAEAAARLGLGRNTVTRKLGPG 472 Xanthomonas campestris
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