3PDI


Conserved Protein Domain Family
nifE

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TIGR01283: nifE 
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nitrogenase molybdenum-iron cofactor biosynthesis protein NifE
This protein is part of the NifEN complex involved in biosynthesis of the molybdenum-iron cofactor used by the homologous NifDK complex of nitrogenase. In a few species, the protein is found as a NifEN fusion protein. [Biosynthesis of cofactors, prosthetic groups, and carriers, Other, Central intermediary metabolism, Nitrogen fixation]
Statistics
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PSSM-Id: 188126
Aligned: 12 rows
Threshold Bit Score: 708.355
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3PDI_A        10 KAKDIAELLdEP--ACSHN-----KKEKSGCA--------KPK-PGATDGGCSFDGAQIALLPVADVAHIVHGPIACAGS 73  Azotobacter vin...
P08293         2 KAKDIAELLdEP--ACSHN-----KKEKSGCA--------KPK-PGATDGRCSFDGAQIALLPVADVAHIVHGPIACAGS 65  Azotobacter vin...
P08737         2 KGNEILALLdEP--ACEHN-----HKQKSGCS--------APK-PGATAAGCAFDGAQITLLPIADVAHLVHGPIGCAGS 65  Klebsiella pneu...
AAA22175       2 NQTEIQNLLdEP--ACTHN-----TAGKTGCS--------RSR-PGATQGGCAFDGAQIAILPIADAAHIVHGPIGCAGS 65  Azotobacter vin...
P95297        20 ADLKVEEVP-EA--VINTLsprreHFTRSCSGggpr-cnrESLpGMVTQRSCVYGGARVVLMPITDAAHLVHGPVGCAAC 95  Methanothermoba...
P10996        11 KNLKVIEQR-EE--SIYYNkksedGGCGGDFKcd-----tASVsGSVSQRACVYCGARVVLNPITDAYHLVHGPIGCASY 82  Clostridium pas...
P51755         3 EKIGIVDTL-EE--RKPYItrkqeKGQEIPLGcd-----nNSLaGAISQRACVYSGARVVLNPVTDAVHLVHGPIGCAGY 74  Methanosarcina ...
WP_011712861   2 KQAEIAELLnEP--ACEHN-----DKSKSGCA--------KPK-PGATAGGCSFDGSMIALFPIADVAHIVHGSIACAGS 65  Magnetococcus m...
AAC35194       4 TKGKINELLtQP--GCEHNhnkegQGKTNLVP--------NRLnLAQHKGGCAFDGASIALVPITDAAHLVHGSIACSGN 73  Cyanothece sp. ...
P0CW54        23 LEVQIPNSIfEKlkSIEALkaresPMCVSGKDdsiptcdqNSTpGMITQRSCVYGGARVVLMPITDAVHLVHGPIGCAAC 102 Methanococcus m...
WP_010913611   4 LSAKIQDVFdEP--ACDTNrgkdaKARKEGCS--------KPLtPGASAGGCAFDGAKIVLQPITDVAHLVHAPLACEGN 73  Mesorhizobium loti
WP_010933203   4 QKISLLEGR-EK--Q---VyektaGGVEVDIAcd-----kTSLsGSVSQRACVFCGSRVVLYPVADAIHIVHGPIGCAAY 72  Chlorobaculum t...
3PDI_A        74 SWDNRGTRSSGPDLYRIGMTTDLTENDVIMGrAEKRLFHAIRQAVESYSPPAVFVYNTCVPALIGDDVDAVCKAAAERFG 153 Azotobacter vin...
P08293        66 SWDNRGTRSSGPDLYRIGMTTDLTENDVIMGrAEKRLFHAIRQAVESYLPPAVFVYNTCVPALIGDDVDAVCKAAAERFG 145 Azotobacter vin...
P08737        66 SWDNRGSASSGPTLNRLGFTTDLNEQDVIMGrGERRLFHAVRHIVTRYHPAAVFIYNTCVPAMEGDDLEAVCQAAQTATG 145 Klebsiella pneu...
AAA22175      66 SWDLRGSNSSGPQLYRLGMTTELSDVDVIMGrGEKKLFHAIRRAVERYQPQAVFVYGTCVPAMQGDDIEAVARDASQRWG 145 Azotobacter vin...
P95297        96 TWDIRGSRSSKSELYRMGFSTGLEEKDVVFG-GEDKLLECILEINEIHSPSAIFVYSTCVSGVIGDDIAAVCRTAENKTG 174 Methanothermoba...
P10996        83 TWDIRGSLSSGEEIYRNSFSTDLREKDVIFG-GEKKLSAAIDEIVAEKHPKVIFVYSTCIVGVIGDDTDAVCKAAEEKYG 161 Clostridium pas...
P51755        75 TWDIRGAKSSGIETNRTSFSTDMKEIDVVFG-GEKKLSNAIDELVEVYHPPVILVYSTCIVGIIGDDLESVCKTASQKHT 153 Methanosarcina ...
WP_011712861  66 SWDGRGSRTTGPALFRLGMTTDLTEQDIIMGrGEKRLLHGIKQAITRYNPAAVFVYQTCIPALIGDDLEAICAAAQNKYG 145 Magnetococcus m...
AAC35194      74 SWNSRGSLSSGPMTYKMGFTTDLSENDVIFG-GEKKLYQAIAQLVKRYHPAAVFVYSTCVTALIGDDLDAVCKAATKKYE 152 Cyanothece sp. ...
P0CW54       103 TWDIRGSKSTGDKLYKNGFSTDLQEKDIVFG-GEKKLYESILEVNKLYHPGAIFVYSTCVVGLIGDDLKAVCRQAQEATG 181 Methanococcus m...
WP_010913611  74 SWDNRGAASSGPTLWRTSFTTDLTELDIVMGqGERKLFKAIREIKETYAPPAVFVYSTCVTALIGDDIEAVCKRAAEKFG 153 Mesorhizobium loti
WP_010933203  73 TWDIRGAVSSGPELHRLSFSTDLQEMDVIYG-GEKKLYKSLIELIDQYQPNAAFIYSTCIIGLIGDDIDAVCKKVAKEKG 151 Chlorobaculum t...
3PDI_A       154 TPVIPVDSAGFYGT-KNLGNRIAGEAMLKYVIGTREPDPLPVgserpGIRVHDVNLIGEYNIAGEFWHVLPLLDELGLRV 232 Azotobacter vin...
P08293       146 TPVIPVDSAGFYGT-KNLGNRIAGEAMLKYVIGTREPDPLPVgserpGIRVHDVNLIGEYNIAGEFWHVLPLLDELGLRV 224 Azotobacter vin...
P08737       146 VPVIAIDAAGFYGS-KNLGNRPAGDVMVKRVIGQREPAPWPEstlfaPEQRHDIGLIGEFNIAGEFWHIQPLLDELGIRV 224 Klebsiella pneu...
AAA22175     146 VPVIPVDGAGFYGT-KSLGNRIAGETLYRHVIGTREPAPLPQgavghGITVHDVNLIGEYNIAGEFWRVAPLFDELGLRI 224 Azotobacter vin...
P95297       175 KWVIQVQSEGFRSFnKSLGHQLACDVILRHIIGRGDAEVRE----------NSVNLVGEFNVAGDLWEIKGLLEKMGIHV 244 Methanothermoba...
P10996       162 IRVIPVKSPGFAGS-KSTGYKAACDALMKLMGDKTTDEKIDG-----------INFLGDFNLAGEIWIVTNYLKKFGIDV 229 Clostridium pas...
P51755       154 IHVTPVKSEGFNGN-KSDGYKAACDALKRLIKRPSEDEIKKKaprvpETIKPKINILGDFNVAGDVWLVNPLFEQMGIEV 232 Methanosarcina ...
WP_011712861 146 VPVVPVDSAGFYGT-KNLGNRIAGEALLKYVIGTAEPTPIPVqaqraGMTVHNVNLIGEFNIAGEFWHVHPLLDELGLRV 224 Magnetococcus m...
AAC35194     153 TPIIPVHAPGFVGS-KNLGNRLGGEALLDHVVGTREPE---------FTTDFDINLIGEYNVAGEMWGVLPLFEKLGIRV 222 Cyanothece sp. ...
P0CW54       182 CRVIPVQSEGFKSFnKTAGHKLACDAMLDYVIGTEEPEEEH---------PYSINIIGEFNVAGDLWGIIPLYEKMGVKV 252 Methanococcus m...
WP_010913611 154 LAVVPINAPGLAGS-KNLGNKLAAEALLDHVIGTVEPD---------DAGPYDINILGEFNLSGEFWLVKPLLDRLGIRV 223 Mesorhizobium loti
WP_010933203 152 IPVLPVHSEGFKGT-KKDGYKAACMALMKLIGQGSTEGISK----------YSINILGEFNLAGEAWIIREYYEKMGIEV 220 Chlorobaculum t...
3PDI_A       233 LCTLAGDARYREVQTMHRAEVNMMVCSKAMLNVARKLQETYGTPWFEGSFYGITDTSQALRDFARLLD----D-PDLTAR 307 Azotobacter vin...
P08293       225 LCTLAGDARYREVQTMHRAEVNMMVCSKAMLNVARKLQETYGTPWFEGSFYGITDTSQALRDFARLLD----D-PDLTAR 299 Azotobacter vin...
P08737       225 LGSLSGDGRFAEIQTMHRAQANMLVCSRALINVARALEQRYGTPWFEGSFYGIRATSDALRQLAALLG----D-DDLRQR 299 Klebsiella pneu...
AAA22175     225 LCTLSGDARFREVQTMHRAEANMVVCSKAMLNVARHLREDYGTPFFEGSFYGIADTSQALRDFAKAIG----D-PSLSVR 299 Azotobacter vin...
P95297       245 VSSITGDSTVAEISEAHTAQLNIVQCSKSSGYIAEEMKRKYGIPYINVNFFGIKETMDSLLSISDFFD---------LN- 314 Methanothermoba...
P10996       230 VAKLTGDSSYDEIMNAPKAKLNIVQCAGSMMYLAKMMEKKFGIPYIKVSFYGVEDTKNSLLKIADILG----N-EEKVKK 304 Clostridium pas...
P51755       233 IVSMTGDSTPKAISRAAEADLNLVQCSGSMTYLPKWMQAEYGIPYLNASFFGIEDISLALRRTADYFG----S-EEIKKR 307 Methanosarcina ...
WP_011712861 225 LSTVSGDTRFREVQVMHRGEANMLVCSKALINMARKLEERYQIPWFEGSFYGVRDMSHALRSFAQLIN----D-DDLSQR 299 Magnetococcus m...
AAC35194     223 LAKITGDARY-EVCYAHRAKLNLMICSKALINMATAMQERYGIPYIEESFYGIADMNRCLRNIAEYFG----D-AALKER 296 Cyanothece sp. ...
P0CW54       253 HTAITGDSTVAKVASAHRSKLNIVQCPKSSNYLAAQMDKKYGIPSFKVNFFGLDETTKSLRAVAEFFG----D-EEMIKR 327 Methanococcus m...
WP_010913611 224 RACIPGDARYIDVASAHRARAAMMVCSSALINLARKMEERWDIPYFEGSFYGITDTSEALRNIAELLVrkgaD-AEILDR 302 Mesorhizobium loti
WP_010933203 221 VATMTGDGRIDDIRRSHGASLNVVQCSGSMTTLAKEMEEKYGIPYIRVSYFGFEDMSKSLYDVAQHFP----ErPDIMEK 296 Chlorobaculum t...
3PDI_A       308 TEALIAREEAKVRAALEPWRARLEGKRVLLYTGG-VKSWSVVSALQDLGMKVVATGTKKSTEEDKARIRELMGDDVKMLD 386 Azotobacter vin...
P08293       300 TEALIAREEAKVRAALEPWRARLEGKRVLLYTGG-VKSWSVVSPLQDLGMKVVATGTKKSTEEDKARIRELMGDDVKMLD 378 Azotobacter vin...
P08737       300 TEALIAREEQAAELALQPWREQLRGRKALLYTGG-VKSWSVVSALQDLGMTVVATGTRKSTEEDKQRIRELMGEEAVMLE 378 Klebsiella pneu...
AAA22175     300 TELLILREENRARAALEPWRERLAGKRALIFSGG-VKSWSVVSALQDLGVEVIATGTEKSTEEDRARIRELMGPNARMID 378 Azotobacter vin...
P95297       315 AEERISSMAEKTHEMIRGYRRALEGKKVAIYVGG-NKAWSLIRAFRDLGMEVIMSGTQNGLPEDYLKIMEKSGRELILFD 393 Methanothermoba...
P10996       305 AKQFVLEEESKIENELDYYRDRLKGKKAAIFVGGaFKAISLIKQFRNLGMETVMVGTQTGKKDDYEIIESITTEGTVILD 384 Clostridium pas...
P51755       308 AEQILETEINRIMPEISRVREKVKGKKAAIYMGGpAKALTLIKGFDELGMEVVIIGTQTGKKEDYEQISYSVRDGTVIVD 387 Methanosarcina ...
WP_011712861 300 TEALIAREEARIDIALKPWREKLKGKRALLYTGG-VKSWSVVSALQDLGMQVVATGTRKSTEQDKARIKELMGEEAIMLD 378 Magnetococcus m...
AAC35194     297 VEQLIEEETTKLDLALAPYRERLKGKRVVLYTGG-VKSWSVVSAAQDLGMEVVATSTKKSTEEDKAKIRELLGKDGIMLE 375 Cyanothece sp. ...
P0CW54       328 TEELIKSEIKNLRDEISEYQKDLSGRTVAIYSGA-HKSWALVSAFGELDMEIIMSGTQNGKPEDYQQIRDHVCEGTLIVD 406 Methanococcus m...
WP_010913611 303 TETLIAEQEAIAWKKLEAYRRRLQGKRVLLNTGG-VKSWSVVHALMEIGMEIVGTSVKKSTVEDKERIKRILKDENHMFE 381 Mesorhizobium loti
WP_010933203 297 AKEIVRDEIRKYYPEMQKFKAALAGKKAAIYVGGaFKTFSLIKALRTIGMSVVLAGSQTGNKQDYKNLKEMCDEGTVIVD 376 Chlorobaculum t...
3PDI_A       387 EGNARVLLKTVDEYQADILIAGGRNMYTALKGRVPFLDINQEREFGYAGYDGMLELVRQLCITLECPVWEAVRRPA 462 Azotobacter vinelan...
P08293       379 EGNARVLLKTVDEYQADILIAGGRNMYTALKGRVPFLDINQEREFGYGGYDRMLELVRHVCITLECPVWEAVRRPA 454 Azotobacter vinelandii
P08737       379 EGNARTLLDVVYRYQADLMIAGGRNMYTAYKARLPFLDINQEREHAFAGYQGIVTLARQLCQTINSPIWPQTHSRA 454 Klebsiella pneumoniae
AAA22175     379 DNDQSALIATCIESGADILIAGGRYLYAALKARLAFLDINHERDFGYAGYGGFVELARQLALAVHSPVWQRVRQEP 454 Azotobacter vinelandii
P95297       394 DANPVELSELLRKYRPDLVVSGAKEKYLSYKLGIPFCEFNHDRIKPFSGFGGFLNFAEEVKRTLESPIWTLASKKR 469 Methanothermobacter...
P10996       385 DANPYELEKFILEQGADILVGGVKERPLAYKLGIAFCDHNHERKHALSGYVGSLNFAKEIDLTINSPVWDYV---- 456 Clostridium pasteur...
P51755       388 DANPLELAELLIRQKADLMVAGVKERFIAYKLGIAFCDFNHDRVVEFEGFDGFVNFAREVDASISSPVWKAVRQRI 463 Methanosarcina barkeri
WP_011712861 379 EGKPRLLLDTMAQQKADVLIAGGRNMYTALKGRVPFLDINQEREYAYAGYEGMIELARQLTITMESPIWSHVKSSA 454 Magnetococcus marinus
AAC35194     376 KGSPTELLRVVEQTKADLLVAGGRNQYTALKARIPFLDINQERHHPYAGYVGMIEMARELDEAVHSPIWRLVRQPS 451 Cyanothece sp. PCC ...
P0CW54       407 DASSMELVQLLKEYKPDILISGAKEKYLSLKSGIPHCDFNHDRITAFSGYQGFINFARVVHTAVMTPIWRLSRKMM 482 Methanococcus marip...
WP_010913611 382 QMAARDLYAMLSKHKADIMLSGGRTQFVALKAKTPWLDINQERQHPYAGYDGMVELVRQIDLAIHNPIWGQVREPA 457 Mesorhizobium loti
WP_010933203 377 DSNPVELSKFVLEKEADLLIGGVKERPIAFKLGVGFCDHNHERKIPLAGFIGMYYFAKEVYESVMSPVWQFAPRKG 452 Chlorobaculum tepidum
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