Conserved Protein Domain Family
DUF535

?
pfam04393: DUF535 
Protein of unknown function (DUF535)
Family member Shigella flexneri VirK is a virulence protein required for the expression, or correct membrane localization of IcsA (VirG) on the bacterial cell surface,. This family also includes Pasteurella haemolytica lapB, which is thought to be membrane-associated.
Statistics
?
PSSM-Id: 427919
Aligned: 37 rows
Threshold Bit Score: 246.746
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
WP_004151446      36 WRQKNYRFKFLLRTALFYNATRAMLEALS--ARDDFNQLLAAQATLPGKVHRQYLTRDLNAWQRAVAVINHYRYIDTLRG 113 Klebsiella
Q9CML1            21 LKRFREYLRYQYAYRLYHKQCGQFDQFLN--QHPLWIPLFQQHPYRVNGLLSTYCNRRWGGSQRLQAITTNLMVATAKFG 98  Pasteurella...
jgi:Asuc_1554      9 GKRIRSFFRYHFYMQRYKAEMREFVQYLQ--QHPQWLPVFEQNGYRFNALLAKFCDRRFSVRQRLSVMKYAFDCAEQCWG 86 
jgi:HSM_0254      20 LKRLRTRIRYYFYRLTCFKECQIFVTYLN--HNPLWIDIFTKSYYRCDAVLRKYCDNRFNKKQRVQAIMDNFSVAEQVFG 97 
Q57144            25 LKQVREKLRYYGYKWLYQKQCSQLVDFLN--TETQWQSLFTQDYYRTNTILTTFCDKRFSASERLTAITENLRLAEEKMG 102 Haemophilus...
Q0P9I5            18 SIIFWRYLRFQARKILYFPQVRLLEKTLNkeKNKHLKDFFSQRPYACYNATRRFCDKSFKANERVKTLIYDVD------K 91  Campylobact...
WP_010786979      21 KSYRLKRFRYRFRSILHRSLIRKFEHKIN--SESSLKPLLIKRADYSYPLVHRFLDKRFNSQRRFNMICDNLDFLPKVLL 98  Glaesserell...
USMARC:WQG_16920  21 KSYRFKRLRFRLRSLMNLRSVQAFEQYVN--QNPDLAAFLNTRANYSYPLVHRFLDKRFNAKQRYQAMVDNLTFLPKS-- 96 
Q57273            26 RFDAPKHWRYNLRSFLNRGSIRRFEQFIN--QHPFLIDIFNTHLDYSYPVACRFLDKRFNASQRFHAVCENLLFLPEKLT 103 Haemophilus...
Q9CKU4            21 KSYRLKRFRFHLRSLLHQGNIKRFEQFIN--QHPTLAGLLNSRPSFSYPLAHRFLDKRFSTKQRFAAICENLRFLPEKFT 98  Pasteurella...
WP_004151446     114 SRLahaMTAVSEVPLLTlngkEDRrFTLYASSAGKAEREGETTLWLRD-SDhTLLASATFSvTrdhDAWQLVIGGLQGPR 192 Klebsiella
Q9CML1            99 VERcqhLLEKGTLILAT----LTDsLSLNLNINTIDPFEGFFSLNIQNtETkQSVYDASFTfL---SEKQLLIASIQGPK 171 Pasteurella...
jgi:Asuc_1554     87 SENcrrLVAQQSLLLAQ----LTEnWGVYLNINAIDPFEGFFSLNIKN-REgRSVYDASFTfL---PENRILIASVQGPN 158
jgi:HSM_0254      98 RSFsqlLVEKDKVLLAE----LTDeLDLYLAINQIDPFEGFFAVNIRN-KQgQRIYDASFSfL---AGNKLLITSVQGPS 169
Q57144           103 RSLcqqLLDQQHIVLTQ----LTEdLRLSLSINHIDPFEGYFSINIRN-QNnERVYDSSFTfL---SPNKLLIASIQGPS 174 Haemophilus...
Q0P9I5            92 GLAcfkFLPEEQIIFS-----FDEdFELFLGYNYNVCEEGFWAFSLKF--KkYTILQCNFCfT---LENNLLLSCIQGHK 161 Campylobact...
WP_010786979      99 SKNlpqLWDS-PICFTE----VIEdFEIYLNVNEYQPMEGFWALELRYkPSgQLVYLLTFGkL----ENALLIAVIQGPN 169 Glaesserell...
USMARC:WQG_16920  97 ------LWQQ-SISFGE----VVPeFSLYLNINEQQPMEGFWALELRHsETnQLIYVLTFGkL----ADSLLIAVIQGPN 161
Q57273           104 ALSt-pLWEK-PLSFGE----VIPdFEMTLSMTTHQPMEGYWVLELWHkPRnELVYLLTFAkL----GDALLIAVVQGPN 173 Haemophilus...
Q9CKU4            99 ALGlpqLWEK-EMCFGE----VIEdFELYLCLNYHQAMEGYWALELRYkPTgQLIYLLTFGkV----EQSLLIAVIQGPN 169 Pasteurella...
WP_004151446     193 RHVS--HEVIKQATRACYGLFPKRLLLEFIWQLAARSQIAAIYGVSDNghvfRALRYRLSKGRHFHASYDEFWQSIDGQP 270 Klebsiella
Q9CML1           172 GEHA--PEIVRVVTKQLHGVRPMFMLVNGFRFLAQQLDC-QLLGIPHR----QQAKYRWNDSERLLFNYDEFWQENDAv- 243 Pasteurella...
jgi:Asuc_1554    159 GAEA--QELVKTATKQLHGMRPMYMIVHVFRTLADVLAY-ELLGIAHK----NQAKFRWNDHSKLLFNYDEFWRENEGAL 231
jgi:HSM_0254     170 DDNS--QELIKSTTKQLHGVRPMFMLVNVYKLLAKELNC-ELLGIAHK----NQGKYRWNDNARLLFNYDDFWQENNALL 242
Q57144           175 SDNA--QELVKQATKALHGMRPMFMLVNGFKMLAEKWQC-ELVGIPHK----AQGKYRLSARSKILFNYDEFWQENQGEY 247 Haemophilus...
Q0P9I5           162 YKDFniLEINKILTKKCHGLRPVALLIECSKMLCEILKLQATLGVHEK----NQIRSQKGKEKGYFVDYQKIWLENGGEL 237 Campylobact...
WP_010786979     170 FEGS--KELVKQLTKKCHGLRPAYLMVEAMKALTQVLGYSKLFGIPQK----YQNKSRFVQSTRYFVDYDTIFKESNG-- 241 Glaesserell...
USMARC:WQG_16920 162 FDGS--KELVKKLTKKCHGLRPAYLMVECMKALTRVLGYSTLLGIPQK----YQNKSRLIQSKRYVVDYDAIFSESGA-- 233
Q57273           174 FEGS--KEMVKQLTKLCHGLRPAYLMVETMKSLTKILGYNKLLGIPQK----YQNKSRFIQSKQYTVDYDAIFGESGG-- 245 Haemophilus...
Q9CKU4           170 FEGS--KELVKVLTKKCHGLRPAYLMVEVMKALTHALGYDKLLGIPHK----YQNKSRLVQSKRYVVDYDAIFAESAG-- 241 Pasteurella...
WP_004151446     271 ---ESPWRWRLPLCLERKSLESIASKKRAEYRRRFQLLDQLTEQVA 313 Klebsiella
Q9CML1           244 ---KQGEYWCLPADVERKPLEDIQSKKRSMYRKRYEMFDNALEQII 286 Pasteurella multocida
jgi:Asuc_1554    232 ---DEEGYWRLPLEVERKPLEEIQSKKRSMYRKRYDMFDSIQRSVR 274
jgi:HSM_0254     243 ---NPQGYWQLPVVIERKTLEDIQSKKRSMYRKRYEMFDFIEKNIT 285
Q57144           248 ---RHN-YWQLPLHIERKQLEDIASKKRSMYRKRYEMLDQMALDIQ 289 Haemophilus influenzae Rd KW20
Q0P9I5           238 ikiNKHKYYKL--HHSQKNLEEIPSQKRSMYKKRFAMLEEIKTNLD 281 Campylobacter jejuni
WP_010786979     242 ---ELKEYWELPLTLESKNLEDIPSNKRSMYRKRYTMLNHLLRAIA 284 Glaesserella parasuis
USMARC:WQG_16920 234 ---SLAEYWLLPLALNNKDLSDIPSNKRSMYRKRYAMLEQIQAAMH 276
Q57273           246 ---ELKDYWELPLEMD-RNLDDIPSKKRSMYRKRYAMLDDLAKVIE 287 Haemophilus influenzae Rd KW20
Q9CKU4           242 ---ELKDYWELPVQFAMKDMDSIPSNKRSMYRKRYAMLEQLQANMK 284 Pasteurella multocida
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap