Conserved Protein Domain Family
PpsR-CrtJ

?
TIGR02040: PpsR-CrtJ 
transcriptional regulator PpsR
This model represents the transcriptional regulator PpsR which is strictly associated with photosynthetic proteobacteria and found in photosynthetic operons. PpsR has been reported to be a repressor. These proteins contain a Helix-Turn_Helix motif of the "fis" type (pfam02954). [Energy metabolism, Photosynthesis, Regulatory functions, DNA interactions]
Statistics
?
PSSM-Id: 273940
Aligned: 4 rows
Threshold Bit Score: 629.544
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
AAN04003  22 LLSVANDITLVIDAHGVVRDLACGGDDFAREAGAEWIDKRWVDIVTPESRDKVEALLREAAPDAVGAIRWRHLNfVLPGD 101 Rubrivivax gelatinosus
AAL76373   1 MLEAVADVQLHLDAEGFCLDVAITNAELTDLMRIPWRGQRWHELCIEEHKERAKNALDAATRTPNTPNRVDLNIcASDSN 80  uncultured marine p...
AAA51375  18 LIATAADISLLVSQEGVVREVMANPHHPSFGQLSEWEGRPLEEVLTAESVAKFRLR-SEGLEPGRGSVAVELNH-IDPRS 95  Rhodobacter sphaero...
AAL68701   4 FHGPRPDVTLLLDMDGVIREATLS-PNMSAENVDAWLGRAWSEIVDDAS-EKIERIMQDTKRTGISAFRQITQR--FPSG 79  Bradyrhizobium sp. ...
AAN04003 102 REVPLLFVAVRLGAsdgkPGHVLAFGRDLRAVAALQQRLVEAQQAMERDYWKFRHAETRYRHLFQVASEAVLVVDATTQK 181 Rubrivivax gelatinosus
AAL76373  81 DELPMSFRLIQPAD----GEGVIAVGRDLRVVSDLRQQVLNAQHAMEQDYWALRQMENRYRRLLELTSDGILVVDEATGR 156 uncultured marine p...
AAA51375  96 FEFPIRYILHRLPA----DRSILMLGRDLRPIAEVQQQLVAAQLAMERDYETQREMETRYRVVLDVSRDPMVLVSMSTGR 171 Rhodobacter sphaero...
AAL68701  80 LELPMEFTTVLLGG----RAGMLAIGKNLQAVAELQARLISAQQTIERDYWRLREIETRYRLVIEDSNEAVLLTKVSDLR 155 Bradyrhizobium sp. ...
AAN04003 182 ILEANPAAARLLADGGSg--SLVGLTFPtgVEARGAEQLNLLLAGVRatgRADEGRAELADGRGEVTVAVSTYRQDLVSH 259 Rubrivivax gelatinosus
AAL76373 157 VLEANSQANAMLSAEGQ---SIIGRPLP--LNSTEIQSLLDSARETG---ATSQRRIVLPNVPHGSDILVSFQRQNSESR 228 uncultured marine p...
AAA51375 172 IVDLNSAAGLLLGGVRQ---DLLGAAIAqeFEGRRRGEFMETMTNLAateSAAPVEVLSRRSQKRLLVVPRVFRAAGERL 248 Rhodobacter sphaero...
AAL68701 156 IVEANRTAAAALGVSNRrrdNLVGREFLheIPEKDREPVELMLRRVRdqgKAPGIVIHLGEDAAPWMLRGSLMTSDNAPM 235 Bradyrhizobium sp. ...
AAN04003 260 FLVRLSRVQAQAAIELAPstgsmLLKLVQSAPDCLVVTDLEGRVISANAAFVELAQLTTEEQVRGETLDRWLGRTGVDLS 339 Rubrivivax gelatinosus
AAL76373 229 YLIRLSNAGEDGNLQGMH-----FADTFELAPDAIVQVDSDGRIEHVNSIFLEWIAVSAPDQVTGRTLDNWIGRSTVDLT 303 uncultured marine p...
AAA51375 249 LLCQIDPADATQPVGDELse--nLARLYHEGVDGIVFSDADGTIRGANEAFLNMTDSSSLAAIRGRSIADFLARGSVDLR 326 Rhodobacter sphaero...
AAL68701 236 FLLQMAPIGKSIQPGPVTdd---pEGLIDNLPDAVLSIDATGTIKRANRAFLDLVEIGSKEALIGEKLSRWLTRPGADLA 312 Bradyrhizobium sp. ...
AAN04003 340 VMISNLRQRGQVRLFATTLRGEYGAVTDVEISATMVAQGERPFLGFTIRDVGRRLAgHD-ARTTRELPRSVGQLTELVGR 418 Rubrivivax gelatinosus
AAL76373 304 VILNNLKQDRPIKLYASVLKNSVGATSEIEISAATVQRGDNPKIVFFIRDISRRLT-AD-HPLTERLPRSIEQITERVGR 381 uncultured marine p...
AAA51375 327 VLIDSVRRTGQLRLYATRLTTDFAGQIAAEISATWLDDRERPLLVLVVRDTSRADTmRRpVPATGVIDEPARNVMELVGN 406 Rhodobacter sphaero...
AAL68701 313 VLLSNVERHGMVRLLSTTIQGELGTETEVEISAAAHGQDGQRRIGLVLRNIARRLSp---TAEHDNLRSALAGLNESVGK 389 Bradyrhizobium sp. ...
AAN04003 419 VPLKDIVGETTDLIEQLCIEAALELTRDNRASAAEMLGLSRQSLYVKLRRYGL 471 Rubrivivax gelatinosus
AAL76373 382 HPLKELVRESTDVIEALCIEAALKLTRDNRASAAEILGLSRQSLYTKLRRYGI 434 uncultured marine proteobacterium
AAA51375 407 STLKDIVAETTDVVEKMCIETALELTRNNRVAAAEMLSLSRQSLYVKLRKFGL 459 Rhodobacter sphaeroides
AAL68701 390 TPLRDLVRSTVEVVEQHYVRAALELANGNRTSAAEILGLSRQSLYAKLDRYNL 442 Bradyrhizobium sp. ORS 278
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap