3FDQ


Conserved Protein Domain Family
MogR_DNAbind

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pfam12181: MogR_DNAbind 
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DNA binding domain of the motility gene repressor (MogR)
This domain family is found in bacteria, and is approximately 150 amino acids in length. MogR is involved in repression of transcription of the flagellar gene in Listeria bacteria. This allows a phenotypical switch from an extracellular bacterium to an intracellular pathogen. MogR binds AT rich flagellar gene promoter regions upstream of the flagellar gene. These regions follow the pattern 5'-TTTTNNNNNAAAA-3'. This domain is the DNA binding domain of MogR.
Statistics
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PSSM-Id: 403419
Aligned: 2 rows
Threshold Bit Score: 224.592
Created: 24-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3FDQ_B                    9 LLQEIKkqvDNPGNSS--TTEIKKMASEAGIDEQTAEEIYHLLTEFYQAVEEHGGIEKYMHSNISWLKIELELLSACYQI 86  List...
PRJNA309927:A8C77_08540  12 LLQNMS---NNKMNDMqlEAEFKKIEKQFQVKYEELVDLYNRMVLFQIDIEKHGGMRAYEKSAITWLKSELELLYEVYQF 88 
3FDQ_B                   87 AILEDMKVLDISEMLSLNDLRIFPKTPSQLQNTYYKLKKELIQVEDIPKNKPGRKRKTQK------NTKKE 151 Listeria mono...
PRJNA309927:A8C77_08540  89 SQRHGLNIINISKYVSKKELNLFPKTESQLQNTYYKLKKCEIPFENIEKQKPGRKRKYTPvkepivEIKKE 159
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