2RC3,4FRY,3FHM


Conserved Protein Domain Family
CBS_pair_bac_euk

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cd04623: CBS_pair_bac_euk 
Click on image for an interactive view with Cn3D
Two tandem repeats of the cystathionine beta-synthase (CBS pair) domains present in bacteria and eukaryotes
The CBS domain, named after human CBS, is a small domain originally identified in cystathionine beta-synthase and is subsequently found in a wide range of different proteins. CBS domains usually occur in tandem repeats. They associate to form a so-called Bateman domain or a CBS pair based on crystallographic studies in bacteria. The CBS pair was used as a basis for this cd hierarchy since the human CBS proteins can adopt the typical core structure and form an intramolecular CBS pair. The interface between the two CBS domains forms a cleft that is a potential ligand binding site. The CBS pair coexists with a variety of other functional domains and this has been used to help in its classification here. It has been proposed that the CBS domain may play a regulatory role, although its exact function is unknown. Mutations of conserved residues within this domain are associated with a variety of human hereditary diseases, including congenital myotonia, idiopathic generalized epilepsy, hypercalciuric nephrolithiasis, and classic Bartter syndrome (CLC chloride channel family members), Wolff-Parkinson-White syndrome (gamma 2 subunit of AMP-activated protein kinase), retinitis pigmentosa (IMP dehydrogenase-1), and homocystinuria (cystathionine beta-synthase).
Statistics
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PSSM-Id: 341391
Aligned: 217 rows
Threshold Bit Score: 124.065
Created: 29-Nov-2006
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
Conserved site includes 41 residues -Click on image for an interactive view with Cn3D
Feature 1:CBS repeat [structural motif]
Evidence:
  • None

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1     #########   #########     ######       ######  ######            #####          
2RC3_A     16 GHTVVAIGPddSVFNAMQKMAaDNIGALLVMKd-----eKLVGILTERDFSRKSylldkpvkDTQVKEIMTr-QVAYVDl 89  Nitrosomonas europ...
4FRY_A     20 GRTIYTVTKndFVYDAIKLMAeKGIGALLVVDg-----dDIAGIVTERDYARKVvlqersskATRVEEIMTa-KVRYVEp 93  Burkholderia ambif...
BAI73865   11 EARVVAVRTsaTVADAIRLMKaENISALIVKDvcrtegnTLAGVLSERDIVHALlergapllAMPVSQLMTr-QPVTCAp 89  Azospirillum sp. B510
BAI73870   11 GTRIGMVRIneTVTTALRLMKaENTGALVVKDvcrtegnTVVGVISERDVVRALvdrgpgilDQPVSALMTr-DPYCCNp 89  Azospirillum sp. B510
NP_769788  11 TPRVVTVRMneTVGIAAKLMRaNNISALVVKDvvrsegnTAVGMFTERDVVRAVaehganaiNVKVSQLVSvqQLVSCTs 90  Bradyrhizobium jap...
ACS18329   11 GNTLFTITPddLLAEAVKTMAeKDIGSLVVMEh-----gDLVGMLTFREVILAIvdnggqvgGTLVRKAMDd-APVTCTl 84  Variovorax paradox...
EME71053   11 GNKIFKILPskAMIEAVQGMAaFKVGAVLVVDek----gGTLGIFTERDVTRCLaahgaavlENPVGDHMTr-NPLTCQg 85  Magnetospirillum s...
EKD53271   14 DKNVVTVSPgtSVVDAAFILRhNNIGALPVMDd-----gVLVGIISERDMVFDVlanrtdpaTIAVADCMTk-DPACVTp 87  uncultured bacterium
KJB91325   11 NHRIVTIRMneTVETAARLMKaENIGALVVKDvcrtegnIVVGMFSERDITRALlehgarvlQMQVSSLMSr-NLITCSp 89  Skermanella aerola...
ADH89978   11 NARVPTIRMseTVEMAATLLNrERIGAVVVKDacgsegdTVVGIFSERDVVRAVaergalalRLTVGDLMSr-NMISCTm 89  Starkeya novella D...
Feature 1                                           
2RC3_A     90 NNTNEDCMALITeMRVRHLPVLDdgKVIGLLSIGDLVK 127 Nitrosomonas europaea ATCC 19718
4FRY_A     94 SQSTDECMALMTeHRMRHLPVLDggKLIGLISIGDLVK 131 Burkholderia ambifaria MC40-6
BAI73865   90 SDSVREALHLMDkHHIRHLPVLEdgHLVGVVSARDFTR 127 Azospirillum sp. B510
BAI73870   90 SDTVRHVLSLMDqHGIRHVPVLEgsTLVGVVSVRDLIR 127 Azospirillum sp. B510
NP_769788  91 IDTIEHVRHLMNrHHIRHLPVIDdySLISVISMRDIAA 128 Bradyrhizobium japonicum USDA 110
ACS18329   85 ETDLDEIRRIMLeRHARYMPVMDkrMLMGVISFYDVAK 122 Variovorax paradoxus S110
EME71053   86 SDTVASVMSTMStHHFRHMPVMEngQLKGIVSIRDLVS 123 Magnetospirillum sp. SO-1
EKD53271   88 FTDIMDCMKLMEeMKVRHIPVVDngLLVGIVSLRDILY 125 uncultured bacterium
KJB91325   90 TDTLLHVLGLMEdKHIRHVPVLDgdTLVGLVGVRDFIG 127 Skermanella aerolata KACC 11604
ADH89978   90 DDSVDHVRALMDqHHVRHLPVLEdhQLVGVLSIRDVLS 127 Starkeya novella DSM 506

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