Conserved Protein Domain Family
dnstrm_HI1420

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TIGR02684: dnstrm_HI1420 
probable addiction module antidote protein
Members of this strictly bacterial protein family are small, at roughly 100 amino acids. The gene is almost invariably the downstream member of a gene pair. It is a predicted DNA-binding protein from a clade within Pfam helix-turn-helix family pfam01381. These gene pairs, when found on the bacterial chromosome, are located often with prophage regions, but also both in integrated plasmid regions and in housekeeping gene regions. Analysis suggests that the gene pair may serve as an addiction module. [Mobile and extrachromosomal element functions, Other]
Statistics
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PSSM-Id: 188241
Aligned: 10 rows
Threshold Bit Score: 127.447
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
uhmanoa:IL0592   4 TFRRFDAASYLNDAESVAAFVADALETE--DAGYIANAIGIAARTKGMTELAQKTGLSREQLYRSFSEKGNPTLKSVLAV 81  Idiomarina lo...
AAF84405         6 KLTSYDPAEDLTTDQAIADFMAAAFGTN--DPAYVAHALGVVARAKGMTQIASQTGLSREQLYRSFSAEGNPTLRTTLAV 83  Xylella fasti...
AAK24999         3 TLSRFDPVEMIDNAEAVAVFLADAFDTG--DADYIQHMLGLIARSKGMAEVAEKAGLGRESLYKALKDGASPRFDTILRV 80  Caulobacter c...
CAH34161         5 ELAEFDGSKYLKDEETIRHYLAQAFEDG--NPRLIQAALGNVAKARGMTALARESGVKREALYRALSEGGNAEFATIMKV 82  Burkholderia ...
CAG36785         3 KTASYNPFDYLTTEEEIRTYLDNASRDE--DPRIFVIALGYLAKKRGMKATAKKVGVSRESLYKSLSGKGNPKYDTIRKV 80  Desulfotalea ...
CAE14601         2 KLKEYDIAEHLNSEEEMQMYLNEIMEDG--DPALVLSALGDIARARNMSQLSREVGMSREGLYHALSGKGNPTFSAMMKI 79  Photorhabdus ...
CAI09465         9 DLPEFDMAEHLKTDVDVAEYLRQVLEDG--EPGELAAALGHIAKARGMSEIAKATGIKREALYKALRPNAHPRLETVQRV 86  Aromatoleum a...
CAD85266         9 EIAEFDVSDYLRDDEDIAEYLTQVLAEG--DSNELLRAIGYIAKARGITQLAKDTGLGRESLYKAFRAGSKPQFETVFKV 86  Nitrosomonas ...
CBX30386         4 KLRKWDSAEYLKTEEDMVLYLEACMEEAgdDAAFIAKALGTIARARGMSQLAKDTGLGRESLYKALSGEGNPSFATILKV 83  uncultured De...
WP_012753210    30 ETSPYDSAEFLESDEAVAEYLAAAIEEG--DAALFRRALGVAARARGMTQIARETGLSRESLYRALSDDGNPSLDTALRV 107 Methylobacter...
uhmanoa:IL0592  82 TKALGIKITAS 92  Idiomarina loihiensis L2TR
AAF84405        84 MKALGIELSAK 94  Xylella fastidiosa 9a5c
AAK24999        81 VHALNLKLALV 91  Caulobacter crescentus CB15
CAH34161        83 VGALGLHLTVA 93  Burkholderia pseudomallei K96243
CAG36785        81 TQALGYQARVK 91  Desulfotalea psychrophila LSv54
CAE14601        80 TKALGLKLHFT 90  Photorhabdus luminescens subsp. laumondii TTO1
CAI09465        87 CKALGVKLTAT 97  Aromatoleum aromaticum EbN1
CAD85266        87 LHALNINLKAI 97  Nitrosomonas europaea ATCC 19718
CBX30386        84 THALGLKLHVh 94  uncultured Desulfobacterium sp.
WP_012753210   108 LNALNVRLTAS 118 Methylobacterium extorquens
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