1UYJ,3ZJX


Conserved Protein Domain Family
PFM_epsilon-toxin-like

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cd20223: PFM_epsilon-toxin-like 
pore-forming module of Clostridium perfringens epsilon-toxin and similar aerolysin-type beta-barrel pore-forming proteins
Clostridium perfringens epsilon-toxin is responsible for fatal enterotoxemia in ungulates. It forms a heptamer in the lipid rafts of Madin-Darby Canine Kidney (MDCK) cells, leading to cell death; its oligomer formation is induced by activation of neutral sphingomyelinase. This group also includes an insecticidal crystal protein Cry14-4 (encoded on plasmid pBMBt1 of Bacillus thuringiensis serovar darmstadiensis). Also included is pXO2-60 (a protein from the pathogenic pXO2 plasmid of Bacillus anthracis) which harbors a unique ubiquitin-like fold domain at the C-terminus of the aerolysin-like domain, and is involved in virulence. They belong to the aerolysin family of beta-pore-forming proteins (beta-PFPs). PFPs are generally secreted as water-soluble monomers, which upon binding to target lipid membranes, oligomerize and form transmembrane pores harmful to cells. Beta-PFPs form pores by transmembrane beta-barrels. Aerolysin-type beta-PFPs are believed to use an amphipathic beta-hairpin to form the beta-barrel, are found in all kingdoms of life and many are bacterial toxins. In addition to having a role in microbial infection, they have potential as biotechnological sensors and delivery systems. They share a similar monomeric architecture, with a variable membrane-binding domain and a structurally conserved pore-forming region. A significant portion of the monomeric subunit structure is re-organized to form the pore. Oligomers formed by members of the aerolysin family include: hepta- (aerolysin), octa- (Dln1), and nonameric oligomers (lysenin and monalysin).
Statistics
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PSSM-Id: 380793
Aligned: 161 rows
Threshold Bit Score: 63.0204
Created: 4-Jan-2019
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
putativeputative
Conserved site includes 46 residues -Click on image for an interactive view with Cn3D
Feature 1:putative membrane-spanning region [structural motif]
Evidence:

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                               ##########      ################         
1UYJ_A        69 VELDGEPSMNYLEDVYVGKALLTNdtqqEQKLKSQSFTCKNTDTVTATT------THTVGTSIQATAKFTVpfne----- 137 Clostridium per...
WP_022584917  86 GEQEVIADSLKKKTNFKTANVFINedpePQTFPTREIVENVSDTHSKTIt----qGFKAGASVKAGFDLGFtkg------ 155 Brevibacillus l...
WP_087949093  94 DLTEEIDSVAYATPYIADSYTFTNdgpiTQEYQTLAYEQAVETSTSNTTthgcrvGSTFGYSRNSTFTAKIrdtek---- 169 Bacillus thurin...
WP_098772175  84 IEIPPDAILENLAPFFYQVANFTNntdtQQEYLTVAFKKTLTETTTTKVthgckaGVKIGYKKTVKVKVVNqkey----- 158 Bacillus cereus
AAV70918      61 TILDDLDSIATLTPEYVYDNYFSNdtstEKTYQTLSFEKDVQTTVSTTVthgfqiGGKLGAEVKGSVSIPFvadggv--- 137 Bacillus thurin...
WP_098228105  64 SAMPNLNNYAKAIPLVAFDNTFTNnstvTQTYMTPEIVKTHSDSKSTSVs----nGFTLGAKATASVSGKVdvpllaegs 139 Bacillus toyone...
WP_098775686 103 DVYQQINSVPLQTPIIADRHEYRNtsslQQAYVSPSYSESVTTTTTNTTt----nGCKFNTKASYSKKSKYkvairdi-e 177 Bacillus cereus
WP_098228102  74 SGMPNVNKYATALPVVALETDFTNtssqTLTYYTPEYTETYNDQKSTNIl----nGFSLGANLPGTISAKVsaavpev-n 148 Bacillus toyone...
WP_025688444  45 TLLENAAIGEVTRIVSSNYVDFKNdtslQQSISTPQATESVTTTNSSSTs----iGFNLGHEINAKVTPIPeale----- 115 Paenibacillus z...
WP_098905719  45 ELLGTANIGEVSRIVLSNYVDYKNagslPQTILTASITEKITTTNSNSTs----iGFNLGQEVSAKVTPVPeave----- 115 Bacillus cereus
Feature 1              ####################                                                      
1UYJ_A       138 --tgvsLTTSYSFANTNTNTNSKEITHNVPSQDILVPANTTVEVIAYLKKVNVKGNVklvgqvsgsewgeipsylafprd 215 Clostridium per...
WP_022584917 156 ---dvtLNTEYNRTNQEGNTTVTSKTIKYPSQTITAPAKSVVVLEYSLEENKAKAYTdvnavlsgeyekkyyfipahkfi 232 Brevibacillus l...
WP_087949093 170 -gfhldVGAEYDFTNTNTFTTSTTTNVLVPSQVITVPSYCTAYVTMVLNKATYAKADvplittlsgrffidetdnsdeyf 248 Bacillus thurin...
WP_098772175 159 ---nreLTLDYNYSNEQSTTNTITSEFTVPSQKVVVPPHKGMRIVMSVAMGYLSSEDvmlsadfsglyyrwtapipplsp 235 Bacillus cereus
AAV70918     138 -tvsaeISGQYNFSSADTETTTTSQKLIIPSQSGNIRPGYTTRVQIMLAKINIPQTAvhfsgsmsgtvhrdpipssvigl 216 Bacillus thurin...
WP_098228105 140 atasveFSAQYQFNTTTTSTSTETVTLRIPPQPVVVPAGKKTHVKIYYAAINITNAPitytgkmsgmvtiepnnvpnfps 219 Bacillus toyone...
WP_098775686 178 rgfnleVGAEYNFSNTQTTTASTIRTVTFPSFTTQVPPRTTAIVSIILNRGYYVNYNvpvevdlfgrfmshhinytndwr 257 Bacillus cereus
WP_098228102 149 gtasveLSAQYQFNTTMTSKSIETKTLKIPPQPIMVPPGKKVHVTLYYATLTLINAPitytgkmsgiittnpnnlthfpp 228 Bacillus toyone...
WP_025688444 116 --iggsTSFSFSFNRTQTNTVENSRSMTFPSQTIIVPPRTWTKGKLLILERTVRQNVkldvdlsnyiciyarqswahgww 193 Paenibacillus z...
WP_098905719 116 --iggsASFSFSFNRTETKTTENSREIIFPSQSIAIPPQTWTKASLLIIERTVRQGVqldvdlsnyiciyarqswahgww 193 Bacillus cereus
Feature 1                                                                                        
1UYJ_A       216 gy-----------------------------------kfslsdtvnksdlnedgtiningkGNYSAVMGDELIVKVRNLN 260 Clostridium per...
WP_022584917 233 pdplcigiltdlietgdikpekektqkfnlydelanndllkaddpvtldeknkkvilngkiLTDSSVYSDRFIIKKKTYS 312 Brevibacillus l...
WP_087949093 249 diypyvel----------------------vttcctgncsqcvtdqlqldavnrtvifdglGSFEANIASNELIVRTKLV 306 Bacillus thurin...
WP_098772175 236 tiyhadlypflk---------------tlaqgcptgsrwnefvkqgiglndatasmsfrgkGLVESEFPSTVFDITTEQY 300 Bacillus cereus
AAV70918     217 vdydlydevr-------------------slenncsnstvgrdtglvlnnanqsvdfsgsgFFTGSITAFNFYVKITEYP 277 Bacillus thurin...
WP_098228105 220 gsvdlysvl--------------------svanehcpnaavngntgltldstnksvnftstGYFNGELLAGNFFVQTDEQ 279 Bacillus toyone...
WP_098775686 258 tfqyydlypfv-----------------elnqtccsstcnacapkeiralpnnstvrfngtGTFIADVASNNFVVTTSFI 320 Bacillus cereus
WP_098228102 229 tdlyskas----------------------kmndrcpnavvngdtglildsknksvnfistGSFNGKVLADNFWVKSEVQ 286 Bacillus toyone...
WP_025688444 194 kdhpiydlcay----------------egietgvpkpsgltfppkgtvspgpqtkvhfnglGFYEVKGALKIYMELQEYN 257 Paenibacillus z...
WP_098905719 194 kdhpifdlcaf----------------egtttgtpkpagltfppagsvppgpqqpvhfrgeGYYEVKGALKMYMELREFN 257 Bacillus cereus

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