Conserved Protein Domain Family
HP_OMP_2

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pfam02521: HP_OMP_2 
Putative outer membrane protein
This family consists of putative outer membrane proteins from Helicobacter pylori (campylobacter pylori).
Statistics
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PSSM-Id: 426814
Aligned: 18 rows
Threshold Bit Score: 431.011
Created: 21-Mar-2022
Updated: 17-Oct-2022
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
O25572        12 LSLLSFLLCP-----AEAFDYRFSGRVENFSKIGFN----NSQINTKKGIYPTESFIDIVTLAQVKVNLlpk--gteNHR 80  Helicobacter py...
O25230        17 TLPLLFTTGS-----LGAVTYEVHGDFINFAKVGFN----HSPINPVKGIYPTETFVNLTGKLEGSVHL--------GRG 79  Helicobacter py...
WP_013022909   8 TTLLVAMSGS-----AGAMDFKPSGSLTSFNRIGFN----NAPMNVKENLYPTESWGTFIVKAQVDADFlskeqkesGQS 78  Helicobacter mu...
WP_013022910   8 LAFLAISSNT-----LQGMDAKISGAVETFNKIGFN----NAPMNVKEGRYPTDTFGTLIARVQVDGDFltkeqkesGQS 78  Helicobacter mu...
O25471         6 KLPLLFVSILynqspLLAFDYKFSGVAESFSKVGFN----HSKLNSKEGIFPTATFVTATIKLQVDSNLlpk--nieKHS 79  Helicobacter py...
Q7VIT2         8 AALGGLFASS-----VNAFDYKVSGSAESFTKWGFN----NQKLDIPNNQAPTESFTTLFAQLNLNADL--------GAG 70  Helicobacter he...
BAM33060       8 SVVLGLVATS-----ASAFDYKVSGSAESFTKWGFN----NQKLNQQSGAAPTESFTTIFSQLNLNLDL--------GAG 70 
O25231        26 LFFLLFSSLFlsklqAYKFNMSIVGKVSSYTKFGFN----NQRYQPSKDIYPTGSYTSLLGELNLSMGL--------YKG 93  Helicobacter py...
WP_013890135  15 fvALALTYLEq----AIAFDMSITGKMSSYTLYGFN----NKRYNPSKFIYPTGSYTSLLAELNVSMDL--------YKG 78  Helicobacter bi...
WP_013023397   8 LIALAFLQSE-----ALEIKNKLSGSAASSSKIGLNinqsPTKVNPAEGILPTESFSVIRANVDYIFSLth-----eGHY 77  Helicobacter mu...
O25572        81 LSVSLGGAIAAIPYDKTK-YDINQA-NGKIFGS--------------------------------IVENFIGGYHGYFFN 126 Helicobacter py...
O25230        80 WTVNLGGVLGGQAYDGTKyDRWAKDfTPPSYWDktscgtdsmslcmnatkmwqqsgpggvinprgIGWEYMGEWNGLFPN 159 Helicobacter py...
WP_013022909  79 FTGSIGIFAGGLIYDNSR------------------------------------------------------RWGNADFD 104 Helicobacter mu...
WP_013022910  79 FTGGIGFLAGGIIYDDTR------------------------------------------------------RWGNVDFE 104 Helicobacter mu...
O25471        80 LKIGVGGILGALAYDSTK-TLIDQAt-HQVYGS--------------------------------ELFFFIGRWWGYLGD 125 Helicobacter py...
Q7VIT2        71 FKAGFGGALGGLAFDSTR----NDPiLDGVGSP--------------------------------VITSYFG-------- 106 Helicobacter he...
BAM33060      71 FKAGFGGAIGGLAFDSTDgKDPNQP-----FSA--------------------------------VRNAYYGvs------ 107
O25231        94 LRAEVGAMMAALPYDSTA-YQGNNIpNGQPGSRtdpf-------------------------gagIFWQYIGWYAGHSGL 147 Helicobacter py...
WP_013890135  79 WHAEVGGMLSALPYDSTA-KQGNNIqPGQPGGPgqfyq-----------------------hdggIYWEYIGWYAGHSGL 134 Helicobacter bi...
WP_013023397  78 FDILLGGSFGGVVYDSTK---------NLVGGS--------------------------------QIYKYIGYWAGVANT 116 Helicobacter mu...
O25572       127 KYLGpayagtSQSASYHARPYV-----VDTAFLRYDYk---------DVFGFKAGRYEA-NI---DFMSGSNQGWEVYYQ 188 Helicobacter py...
O25230       160 YYPA------NAYLPGGSRRYQ-----VYKANLTYDS----------DRVHMVMGRFDItEQeqmDWIYQLFQGFYGTFK 218 Helicobacter py...
WP_013022909 105 KNFNl-----KSGDSVVGAWYViananIYNLYGRYEIrkpnadgtadHVFSIKGGRYES-SA---EFMYAYTQGFELDYK 175 Helicobacter mu...
WP_013022910 105 RNFHv-----KSGDSIAGTNYIitngvLYNLYLQYQIqrpnadgtaeHIFTIKGGRYKS-TA---MFMSGFNQGFELDYR 175 Helicobacter mu...
O25471       126 APWKd----sRIESDAHTRNYV-----LYNSYLFYSYg---------DKFHLKLGRYLS-NM---DFMSGYTQGFELDYK 183 Helicobacter py...
Q7VIT2       107 ----------TAWDKAKVQNYM-----VQNAFLEYSYs---------DNVYFKAGRYQSgKVg--EWFSGYNQGAEGYLQ 160 Helicobacter he...
BAM33060     108 --------wdRNNNNGKIQNYM-----FQNAFVEYDN----------NTFYVKAGRYESgKVg--EWFSGYNQGAEAALN 162
O25231       148 Q-------------VQKPRLAM-----VHNAFLSYNYkk------dkFSFGVKGGRYDAeEY---DWFTSYTQGVEGFVK 200 Helicobacter py...
WP_013890135 135 N-------------VQTPRYAM-----VNNAYLSYDYk---------GIFGIKGGRYELsDY---DWFTSFSQGVEGYVK 184 Helicobacter bi...
WP_013023397 117 ----------KGPGNKDTRNYI-----LYNANVFYRYd---------RYFSIRIGRFGLdIG---DWQRGFREGVDIRSQ 169 Helicobacter mu...
O25572       189 PYktetqRLRFWWWSSF-GRGLAF-NSWIYEFFATVPylkkggnpnnsndfinYGW--HGITTTYSY-KGLDAQFFYYFA 263 Helicobacter py...
O25230       219 LTk----NMKFLLFSGW-GRGIAD-GQWLFPIYREKP----------------WGV--HKAGIIYRPtKNLMIHPYVYLI 274 Helicobacter py...
WP_013022909 176 YK-----GLNLWWYSSF-GRAFAE-GSWMYPWYNPKQmnn-----------vnYGI--HILQLSYTFkSGFHIQPYVYIS 235 Helicobacter mu...
WP_013022910 176 YK-----GLELWWFSSF-GRGFAY-SEWIYDFYARKKmnn-----------tnYGI--HVLKASYSFnSGFYISPFVYFS 235 Helicobacter mu...
O25471       184 INs----KIALKWFSSF-GRALAA-GQWIRDWYAPIVtedgr-------kdvdYGI--HAVQLYFSN-KHVQATPFFYFS 247 Helicobacter py...
Q7VIT2       161 AG-----SVKLWGFLSN-RRAFAY-DQWFNDFYRVHGiygg---------gatRNT--YALGLNLTF-GGLTLSGFSYYT 221 Helicobacter he...
BAM33060     163 IS-----ALKVWGFLSN-RRAFAY-DQWFNDFYRVHGkynd--------siatRNT--YAAGLDLNF-GGLTIGAFSYFT 224
O25231       201 YK-----DTRFRVMYSD-ARASAS-SDWFWYFgry----------------ytSGKalMVADLKYEK-DNLKINPYFYAI 256 Helicobacter py...
WP_013890135 185 YK-----DYKLRVLYSD-ARASAS-SDWFWPFgry----------------ytSGKplMIADLKYQH-KGLKINPYFYSI 240 Helicobacter bi...
WP_013023397 170 AIp----NTTLWFFATNkGAAVAKgGPWLRDFryinvndtkg-dwdygrgfwlFGT---GAQVIY---KNFTIHPMFYAQ 238 Helicobacter mu...
O25572       264 PKTYNAPGFKLVYDTNRNFQNVGFRSQSMIMTTFPLYYRGwynpetntYsledSTP------------HGSLLGRNGVTL 331 Helicobacter py...
O25230       275 PMVGTLPGAKIEYDTNPEFSGRGIRNRTTFYALYDYRWNNa------eYgryaPARyntwdpfldngkWRGLQGPGGATL 348 Helicobacter py...
WP_013022909 236 PDFYVAPILKLIYDSNPNFNKQGVRSKTTVNFMYVHHTPaaak----------------------qwrYLAIAGHDAQTL 293 Helicobacter mu...
WP_013022910 236 PDFYVAPIIEAKYDSNPGFNREGVRSVTRVIFMSSFNTPaask----------------------qwaYQFLTGKEGHTL 293 Helicobacter mu...
O25471       248 PKTYEAPGIKIHIDSNPKFRGLGLRSQTLINVIFPVYAKdlyd----------------------vvwRNSKIGEWGASL 305 Helicobacter py...
Q7VIT2       222 PGIVTAPGASITFDTNPNKESQGFRSITKLRFLAPIADIsqr----inAkrwgE------------------IDKHSYTL 279 Helicobacter he...
BAM33060     225 PGIYTAPGANVTFQSNPSFEGQGFNATTKIRFLAPIADDRiaftqgspNrdwgE------------------IGKYSYTL 286
O25231       257 FQRMYAPGINITYDTNPNFNNKGFRFVGTFVGFFPIFATPanqndiilF-------------------QQVPLGKSGQTY 317 Helicobacter py...
WP_013890135 241 FGRMNAPGINITYDTNPNFRDKGFRWVGTFVGFFPFFPPSgrgydmilF-------------------GQEKMGKYGQTL 301 Helicobacter bi...
WP_013023397 239 DSRFVSPTLDIIYNFRPDFDGKGFNFKTQVVGMYAYYLRGawhlda----------------sldnfqPETKIKGGGGSL 302 Helicobacter mu...
O25572       332 NIRQVFWWDNFNWSIGFYNTFGNSDAFLGSHTM----PRGnntsyigseisittrhagmigYDFWDNTAY---DGLADAI 404 Helicobacter py...
O25230       349 LLRHHIDINNYFVVGGAYLNIGNPNMNLGTWGN----PVAvd------------------gIEQWVGSIYslgFAGIDNI 406 Helicobacter py...
WP_013022909 294 NFTEQVDINNYYIAAGGYFNFGNANAQLGTYGNpw-iP-----------------------WNYWSSTVYq--MGGMTAA 347 Helicobacter mu...
WP_013022910 294 AILQQVDINNYYIGAGWYQNFGNGNAQIGTYGNgaigP-----------------------WDFWTNTVYn--MSAVSNA 348 Helicobacter mu...
O25471       306 LIHQRFDCNEFNFGFGYYQNFGNANARIGWYGN----PIP---------------------FDIRSNSIY---GLVFSNA 357 Helicobacter py...
Q7VIT2       280 YLEQRFEVNLFNFGAGYYQNFGNANELIGRWGN----PIS---------------------IDIWTGSAYd-iGQSLNDI 333 Helicobacter he...
BAM33060     287 YIDQRFDVDKLFFGVGYYQNFGNANELIGRWGN----PIG---------------------IDIWTAGAYd-iGNALNDI 340
O25231       318 FFRTRFYYNKWQFGGSVYKNIGNANGDIGIYGD----PLG---------------------YNIWTNSIY---DAEINNI 369 Helicobacter py...
WP_013890135 302 FFRSRFYYNKWQFGGSIYKNIGNANGDIGIYGD----PLG---------------------YNIWTNSIY---DAEINNI 353 Helicobacter bi...
WP_013023397 303 FIKQTFFYDNYEFGAALYTTFSDPHQFFGG-AN----PTG---------------------FDSFTGTIYq--FTTWNNV 354 Helicobacter mu...
O25572       405 TNANTFTFYTSVGGIH--KRFAWHVFGRVSHANknalgqvgRANEYSLQFNASYAFTES-ILLNFRITYYGARINKGYQA 481 Helicobacter py...
O25230       407 TDADAFTEYVKGGGKH--GKFSWSVYQRFTTAP--------RALEYGIGMYLDYQFSKH-VKAGLKLVWLEFQIRAGYNP 475 Helicobacter py...
WP_013022909 348 LTKNAKSGYIYVGGSHlgGKLEWRILGRITRSP--------FENEASIPFNLYYTVNKY-FKMWFKLEWQTATLHKGYVI 418 Helicobacter mu...
WP_013022910 349 VTKDAKTGYIYGGGQH--GNFKWDILGRLTYSI--------RADEKAIPLNLYYTFNKH-FRIWFKLEWQRVTTHAGFVF 417 Helicobacter mu...
O25471       358 VTADSVSGYVFGGGVY--RGFLWGILGRYTYAT--------RASERSINLHLGYRWGSF-ASVDVNLQYYEVSMHTGYKV 426 Helicobacter py...
Q7VIT2       334 IGRNAITGFGYIGANY--SSFDWKILGRGTNSP--------RSAEQSVAFILNYQIRED-IAVGGKLEWFSDTTKKGYSP 402 Helicobacter he...
BAM33060     341 IGRNAITGFGYLGANY--GSFDWKFIGRGTNSP--------RSAEQSVALLLNYRIRED-IAIGGKLEWFSDTTKAGYKS 409
O25231       370 VGADVINGFLYVGSQY--RGFSWKILGRWTDSP--------RADERSLALFLSYFSNKYnIRMDLKLEYYGNITKKGYCI 439 Helicobacter py...
WP_013890135 354 VGKDALNGFLYFGSHY--RSFTWKVLGRLTTSP--------RANEQSVALFLSYFLSRYnLKFDLKLEYYNNITKKGYCL 423 Helicobacter bi...
WP_013023397 355 FRKYAHTGWAFVGGSH--KDLTWRVVGRYTNAT--------RAQEQSVLCSFTYKFTKN-FEGNFTIQYYGLTTKAGHLL 423 Helicobacter mu...
O25572       482 G------------YFG---APKFNnpdgDF-----SANYQDRSYMMTNLTLKF 514 Helicobacter pylori
O25230       476 GtgflgpngqplnLNTglfESSAFaqgpQNmggiaKSITQDRSHLMTHISYSF 528 Helicobacter pylori
WP_013022909 419 Ali---------------pNNPGSyylpGSpfkatKNVTQDRSNFMFSFTYSF 456 Helicobacter mustelae
WP_013022910 418 -------------------TTSSTldidASpfrikKSITQDRSQAMIILTYGF 451 Helicobacter mustelae
O25471       427 N------------DLTspfNKAFK------------ANTQDRSNLMVSVKFFF 455 Helicobacter pylori
Q7VIT2       403 L--------------GgsyQSQNN-----GgtmltQNRKDDRSHAFFYIRHIF 436 Helicobacter hepaticus
BAM33060     410 I------------VWGdakQSEDG-----GgksdtKKRTDDRSHAFFYIRHTF 445
O25231       440 G-------------YCgmyVPVDPn--gPGtqpltHNVYSDRSHIMFNIAYGF 477 Helicobacter pylori
WP_013890135 424 Gfgfg-----ptpDTCgswDPATN----NFaprltRNVDSDRSHLMFTLTYGF 467 Helicobacter bizzozeronii
WP_013023397 424 Gtkr-----------------------------llQDTYSDRSSIRTSLVYFF 447 Helicobacter mustelae
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