Conserved Protein Domain Family
PRK07921

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PRK07921: PRK07921 
RNA polymerase sigma factor SigB; Reviewed
Statistics
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PSSM-Id: 181169
Aligned: 46 rows
Threshold Bit Score: 569.364
Created: 9-Dec-2010
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
302866072   1 MTQQMIEHQDMDVTLTDLDAtdeRGVSTDLVRAYLNGIGRTKLLTAAQEVELSKRIEAGLFAEEKLATCTPVSAELHADL 80 
134098366   1 MTVPQTITSDAAAIEADLDT---QGPSADLVRVYLNGIGRTALLTAQEEVDLAKRIEAGVFANHVLETSGKLSPERRSDL 77 
257056437  19 PVPTDDDVMPAPAEEADLDA---QGPAADLVRVYLNGIGKTALLTAEEEVDLAKRIEAGVFAQHVLDTSDDLSEERKAEL 95 
300784474  20 QTTEEPSMSLGALTDADLDA---QSPAADLVRVYLNGIGKTALLSAADEVELAKRIEAGVFAQHMLDTGENLTTKRRTEL 96 
68536171   21 DSTDDSDKKEDKGRRRGN-N---ENPSADLVRVYLNGIGKTALLTAEDEVELSKRIEVGLYSEYLLSNAEKLTRAKKRDL 96 
256375630   7 LDREVGNDTSAPSVDLDLDA---QGPAADLVRVYLNGIGKTALLTAAQEVELAKRIEAGVFAHHVLETTTALNAGRADEL 83 
172040574  17 KDDSSQQEQNTDRRRRRGNN---ENPSADLVRVYLNGIGKTALLTAEDEVELSQRIEAGLYAEQLLKSGEPLTRAKKRDV 93 
258653916  11 ATTATAATTRTVSHDEDLDA---QGPSADLVRVYLNGIGKTALLTAEQEVELAKRIEAGVFAAHVLESDVEMSPQRRKDL 87 
237785656   5 HVSTTTEVNGDPG-RRANNN---ENPSADLVRVYLNGIGRTALLNAEDEVELSQRIEAGLYAQHLLESDEQFTPSKKRDL 80 
145594010   8 HGMRPTSGADTLTDLDATDE---RGVSTDLVRAYLQGIGRTKLLTAAQEVELSRRIEAGLFAATKLATCTPVSVALRADL 84 
302866072  81 ALIAAEGRAAKDHLLEANLRLVVSIAKRYTGRGMAFLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAITRAMAD 160
134098366  78 KAVVRDGVLAKNHLMEANLRLVVSLAKRYTGRGMPLLDLIQEGNLGLIRAVEKFDYTKGFKFSTYATWWIRQAITRGMAD 157
257056437  96 SEVVRDGEEAKNHLLQANLRLVVSLAKRYTGRGMPLLDLIQEGNLGLIRAVEKFDYTKGFKFSTYATWWIRQAITRGMAD 175
300784474  97 AALVRDGHVAKNHLLEANLRLVVSLAKRYTGRGMPLLDLIQEGNLGLIRAVEKFDYSKGFKFSTYATWWIRQAITRGMAD 176
68536171   97 KVLAREGKAARSHLLEANLRLVVSLAKRYTGRGMPLLDLIQEGNLGLIRAMEKFDYTKGFKFSTYATWWIRQAITRGMAD 176
256375630  84 RALVRDGLRAKNHLLEANLRLVVSLAKRYTGRGMPLLDLIQEGNLGLIRAVEKFDYTKGFKFSTYATWWIRQAITRGMAD 163
172040574  94 KILAREGKAARTHLLEANLRLVVSLAKRYTGRGMPLLDLIQEGNLGLIRAMEKFDYKKGFKFSTYATWWIRQAITRGMAD 173
258653916  88 RMVVRDGGRARNHLLVANLRLVVSLAKRYTGRGMPLLDLIQEGNLGLIRAVEKFDYTKGFKFSTYATWWIRQAISRGMAD 167
237785656  81 KAVAKDGRAARAHLLEANLRLVVSLAKRYTGRGMPLLDLIQEGNLGLIRAVEKFDYTKGFKFSTYATWWIRQAITRGMAD 160
145594010  85 ELVAAEGRAAKDHLLEANLRLVVSIAKRYTGRGMAFLDLIQEGNLGLIRAVEKFDYTKGYKFSTYATWWIRQAITRAMAD 164
302866072 161 QARTIRIPVHMVEQVNRMVRVRRELSVTLGREPTVSEVATALEIPEFQVIELISYDREPVSLDQAVGEDGESALGDFVAA 240
134098366 158 QSRTIRLPVHLVEQVNKIARIKRDLHQKLGREATDEELANEAGLTVEKVADLLDHSRDPVSLDMPVGAEEDAPLGDFIED 237
257056437 176 QGRTIRLPVHLVEQVNKLARIKRDLHQRLGREATHEELAAESGIAEKKVADLLDHARDPVSLDMPVGADEDAPLGDFIED 255
300784474 177 QGRTIRLPVHLVEQVNKLARIKRDLHQQLGRDATHEELAAESGIPAHKISDLLDHSRDPVSLDMPVGTEEDAPLGDFIED 256
68536171  177 QSRTIRLPVHLVEQVNKLSRIKREMYQQLGREATNEELSEESGIEESKIEMLLKQSRDPVSLDMPVGSDEEAPLGDFIED 256
256375630 164 QGRTIRLPVHLVEQVNKLARIKRDLHQQLGREATNEELAAESGLSPTKVSDLLDHARDPVSLDMPVGAEEDAPLGDFIED 243
172040574 174 QSRTIRLPVHLVEQVNKLSRIKREMYQHLGREATYEELAEESGIPEDRIEMLMKQSRDPVSLDMPVGTDEEAPLGDFIED 253
258653916 168 QGRTIRLPVHLVEQVNKLSRLKRELHQQLGRDATLAELAHESGIPEEKIADLLDHARDPVSLDMPVGSDEEAPLGDFIED 247
237785656 161 QSRTIRLPVHLVEQVNKLSRIKREMYQHLGREATNEELAEESGIDESKIDLLLKQSRDPVSLDMPVGTDEEAPLGDFIED 240
145594010 165 QARTIRIPVHMVEQVNRMVRTRRELSVSLGREPTVAEVARTLDIPEIQVIELISYDREPVSLDQTVGEDGESPLGDFVAA 244
302866072 241 VDPRTEpGDAATNGELRNEVRIVLATLSQREQAVIRLRFGLDDGRQRTLDEVGREFGLSRERIRQIEKVTLLKLRDPERA 320
134098366 238 AESADA-ENAVISGFLQDDLRRVLSTLEEREQAVIRMRYGLDDGQPRTLDQIGKAFGLSRERVRQIEREVMSKLRQGDRA 316
257056437 256 SEAANA-ENSVISTLLQDDLRRVLATLDDREEHVIRLRYGLDDGQPRTLDQIGKHFSLSRERVRQIEREVMAKLRHGERA 334
300784474 257 SEATDA-ESAVISGLLQDDLRRVLATLDDREQHVIRLRYGLDDGQPRTLDQIGKHFGLSRERVRQIEREVMSKLRQGERA 335
68536171  257 SDATDA-ETAVVASLRHSDVRAVLGTLEEREQDVIKLRYGLDDGMPRTLDQIGRRFGLSRERVRQIEREVMAKLREGDRA 335
256375630 244 SDATDA-ESAVISGLLQDDLRRVLATLEQREQAVIRLRYGLEDGQPRTLDQIGKQFGLSRERVRQIEREVMSKLRQGERA 322
172040574 254 SEAEDA-EAAVVASLRHSDIRSVLATLEQREQDVITLRYGLDDGLPRTLDQIGRQFGLSRERVRQIEREVMAKLREGQRA 332
258653916 248 SESTSA-EAAVVAGFMHDDINRVLRTLDDREQTVVRLRYGLDDGRPRTLDEIGRHFGISRERVRQIERDSMAKLRVGDRS 326
237785656 241 SEATDA-EEAVVASLRHSDIRTVLATLEKREQDVIRLRFGLDDGVPRTLDQIGREFGLSRERVRQIEREVMAKLRKGERA 319
145594010 245 VDSTAGtDDTVSGGELRQEMCGVLATLSQREQAVIRLRFGLDDGRQRTLDEVGREFGLSRERIRQIEKGTLHKLRAPERA 324
302866072 321 NRLEAYAC 328
134098366 317 DKLRAYAS 324
257056437 335 DKLRAYAS 342
300784474 336 DRLRAYAS 343
68536171  336 DKLREYAV 343
256375630 323 AKLRAYAS 330
172040574 333 DKLREYAV 340
258653916 327 EVLRSYAS 334
237785656 320 DKLRSYA- 326
145594010 325 QRLEAYAC 332
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