1SI7


Conserved Protein Domain Family
TruD

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COG0585: TruD 
tRNA(Glu) U13 pseudouridine synthase TruD [Translation, ribosomal structure and biogenesis]
tRNA(Glu) U13 pseudouridine synthase TruD is part of the Pathway/BioSystem: tRNA modification
Statistics
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PSSM-Id: 440350
Aligned: 276 rows
Threshold Bit Score: 218.143
Created: 9-Feb-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1SI7_A        21 MiefdNLT-YL------HG-----KPQGTGLLKANPEDFVVVEDLGFEPD------------------------------ 58 
WP_012632751   1 -----------------------------MRLKQRPEDFQVTESWKFDED------------------------------ 21 
WP_012909482   1 -----------------------------MRIKCLPTDFQVDEILSLEP------------------------------- 20 
WP_013111364   1 Mrs-----lYCcrslepTTllptpAVAARMKLKCLPEDFQVEELSEFEI------------------------------- 44 
WP_013564647   1 -----------------------------MKLKRLPEDFLVEERLLIPLTdpralptsdldcddsqaqgvssgsesslgq 51 
WP_015245098   1 -----------------------------MKLKRLPEDFHVEELPVVAQGe----------------------------- 22 
WP_082342669   1 -----------------------------MKLKQRPEDFVVREAYRIDFD------------------------------ 21 
WP_082846088  97 Mn--rGRSlLAp----rTTkl-pvSHENRMKLKCTPEDFQVDELTDFPIG------------------------------ 139
WP_076349446   1 -----------------------------MKLKRQPEDFQVEELPRVTLA------------------------------ 21 
WP_095413732   1 -----------------------------MKLKQQPEDFVVEEVTQFPL------------------------------- 20 
1SI7_A        59 -------GEGEHILVRILKNGCNTRFVADALAKFLKIHAREVSFAGQKDKHAVTEQWLCARvpGkemPDlSAFQLEGCQV 131
WP_012632751  22 -------PRGAWFVYLMDKQKLSTFEAVDRICTRFKIPRASVSYCGLKDKQGRTTQLVALE--R---RE-IELQDTDLRL 88 
WP_012909482  21 -------TGGKYALYELRKTSITTFSAVDRVARAWRIPREELVFAGLKDKHACTTQGLSIFe-G---PR-KNLSIDGLEV 88 
WP_013111364  45 -------QGGNYAVYKLTKTSLGTPEAIEAILRRWKIKREHISYGGLKDRHAITQQYVTISr-G---PR-RDLNQQNFTL 112
WP_013564647  52 tssdqpiARGEFVLYRLTKIGLGTPEALEAIRRRWNLPRASLSVGGLKDRHARTIQYLTIRr-G---PW-RRLRQSRLEL 126
WP_015245098  23 -------PRGRFVYYRLTKRGLGTLEAIEAISRRWNVPGRRISYGGLKDRHAVTVQYLTIFe-G---PE-RPLHETSFDL 90 
WP_082342669  22 -------PKGPHRVYLMDKQKLSTFEAVQRIATRMRVPQKAISFCGLKDKQGRTEQLVAVR--G---KD-AEMQEPDLRL 88 
WP_082846088 140 -------QEGNFAVYRMSKRGLTTPDAIDAIARRWKLDRQRLSYGGLKDRHALTSQFLTVFr-G---PK-RELIQTNLSL 207
WP_076349446  22 -------PQGRFTYYKLTKRGLGTLEAIEAIRRHWNLPGRSVSYGGLKDRHAVTVQYLSIFd-G---PD-VSLHQASLEL 89 
WP_095413732  21 -------DGGPFATYVLTKRSLGTPEALDKVRKQWKIPLHAVSYGGLKDRHAVTTQWVTIRg-G---PP-RDLQLNGVRL 88 
1SI7_A       132 LEYARHKRKLRLGALKGNAFTLVLREV-SN-RDDVEQRLIDICVKGVPNYFGAQRFGIGGS-NLQGAQRWAQTNT----- 203
WP_012632751  89 KPLGRSRTRLSAANTTSNRFAVTVRDLgEDdVARLPASVAEVRRLGVVNYFDSQRFGSLKHgQGFIVKDLMRGDFeialr 168
WP_012909482  89 RYVGQTPRAIHPRDIVCNEFLVIVRDLsDAdLARSVAAVREVNEFGLPNYFDKQRFGSLGEsGEFVAKAWCQGDHeralf 168
WP_013111364 113 VYQGQTKQHFGPTDISGNRFHIVIRDLpRNvAQKYVNLRESLLVDRLPNYFDDQRFGSLGAsREFIAQPWCAGNYeralw 192
WP_013564647 127 VPVGTMSRPYGPRDFAGNRFSLVLRDLdRDaLERAKRGLESLERDGLPNYFDDQRFGSVGFtGEFQAASWLKGDHaralw 206
WP_015245098  91 EPVGRLPEPYSPSHFRGNRFVVVLRDLsPHsLDQALKAVAEVPRDGLPNYFDDQRFGSVGFgGGFIAQAWLTGDHerafr 170
WP_082342669  89 KYLGRIAEPLSARHLTANRFAITVRDLsEEdVARLAASVADVRRVGVVNYFDSQRFGALKHgQGFIAKDLIRGNTehaly 168
WP_082846088 208 RYLGQAIRPYKPIDITENQFSLVMRDMsDAeLATATAALQNVAADGLPNYFDDQRFGSVSQdGEFIGRAWIEENYerclw 287
WP_076349446  90 EPLGKLERPYTPQDFTGNRFEIVLRDMtAEaAARAGTQLEALSRDGLPNYFDDQRFGSVGFsGEFIAEAWLKGDHeralr 169
WP_095413732  89 EYRGQASRAFTSDDILANRFRIVLRDLaPQeLQAAIAALDEVKQWGLPNYFDKQRFGSVGWsGDFVARAWCLGDYeralw 168
1SI7_A       204 ----------------------------------------------------------PVRDRNKRSFWLSAARSALFNQ 225
WP_012632751 169 nvlarpseldqsgdakvkafwkehwgewdrrnpnpgaeryqavvkwlrdhpedyrgalLRTEPRWRGLQVFAYQSWLWNE 248
WP_012909482 169 lavadpnshdspsdreqkqilrehwgnfgeavdllpmglslqiaeqlaigkpdykralTMLKHDLRSLLLSAYQSDIWNR 248
WP_013111364 193 lalaepnphdrpddreekrilrdnwgnwvdckaklaqssrrsivtylcdhptnfknafALIRVDLRGLFLSAYQSYLWNH 272
WP_013564647 207 laiaqanpldrpharhekellrahwgdwlaakaalprgharslvtylvdhpedfrgafARLRYDDRSIAFSAFQSHIWNL 286
WP_015245098 171 lamaepnpsdrptakaekailretwgnwaeaksrldrsnarslvtylvdhptdfrgafARLRRELRSLYFSAFQSHLWNL 250
WP_082342669 169 nymakpspldqsedakvkkfwaehwgdwdrhcphkavaryrnvlvhlreypddwagafLEIEPRYRALLLFEYQSWLWNE 248
WP_082846088 288 lalaephpldrsgekkqkqilrdhwgqwpeckarlekshrrsiitfladrpgdfrgawGCVRADLRSLYLSAFQSDLWNQ 367
WP_076349446 170 lafaepnpfdrpdtkarkatlrecwgdwaaakagldrssersivtylvdhptdfrgafARLRRELRSLYFAAFQSHLWNL 249
WP_095413732 169 laladphdsdraadkkekqflrehwgdwaeckkvvrnrfrravvaqladqpgqyrramAAVRRDQRALYLAALQSYLWNA 248
1SI7_A       226 IVAERLKKAD-VN-----QVVDGDALQLAGrgswfvatTEELAeLQRRVndkeLMITAALPGSGEWGTQREALAFEQAAV 299
WP_012632751 249 GVKQYLREVVgIQrlvslRYQAGSLLFPR---------ELDAA-LVRLL----SSKTFPLLAPSTRFDDPAVERAALSVL 314
WP_012909482 249 LLSSVIRDVVpASilfeeTIGPRRLAMFH---------TLDPK-SQREL----QDLMLPLPSARLHLPPGPLYDRLAEVL 314
WP_013111364 273 ILAELIRSKVwHErvyevGLSAQQVAFCT---------SLTME-EQDEL----SRVKLPLPSARIDLEGSALEAHYENVL 338
WP_013564647 287 ALASWIRHHLpETrrleiPFKLGPLPIPH---------HLDPF-HAETL----NHLRVPLPSARNPKPVGEWAGHFARAL 352
WP_015245098 251 ILARWIERNTrEDqrvpiDFKVATLPIHH---------GLDPV-QAELL----SLSRIPLPASRSPLPDGPMREIAEEVV 316
WP_082342669 249 GVRRLLQGLIdERelislRYQAGRLLFPR---------EIGGD-VLRDL----RDRDFPLLAPDSEYDDEETRHAVEETL 314
WP_082846088 368 VLNRLIRRRCpAEqiaevRLVTGPLAFPRL----------TDE-QRQEF----REMLIPLPSGRTRLDGHPQADEIRDVL 432
WP_076349446 250 VLAGWIERNTrVEqrspvDLKVGVFPFPV---------GLDED-QRKAI----AAVPLPLPSSRNKPGDGPVDEITTDVL 315
WP_095413732 249 MASEWIRQRVpPEdcfevVIARWTFTFYR---------RLNAQ-LLNEF----RETQLPLPSARCGVKTGPVRELMERAA 314
1SI7_A       300 AAETELQALL---VR--EKVEAARRAMLLYPqQLSwnwW--Dd-----VTVEIRFWLPAGSFATSVVRELINTT 361
WP_012632751 315 GREDMGLADLavpGTpeIHFDPEERPLFSFPgRLAvgeArpDelnrdrFRVNVAFTLPPGAYATLVVKRLFHWT 388
WP_012909482 315 AEDGMTLRELrvkYPrdTFFSKGDRAAIVRAdELEa-iPeaDerypgkQKLLLSFSLRRASYATMLVKRITALE 387
WP_013111364 339 RELGIELRELrvkYPrdSFFSKGERPALIVPhNLQm-aMasDeqyagrYKVTCDFELPRGSYATIVLKRLTLDP 411
WP_013564647 353 DPFGLTWDDLrvrHLkdLFLSKGDRPALIRPeRVRf-eSqpDelyprrSKLILQFDLPRGSYATILVKRITAFV 425
WP_015245098 317 AEFGLSWENLrvkHLkdVFFSKGTRPALFFAeNLEy-sGapDeldrrrKKLTLSFELPKGAYATLLVKRVTDAA 389
WP_082342669 315 QRERLSLRDLeltRLpgMFFKHEERPLIIYPgKLVvsePrpDemnrgrLRVNVAFTLPPGAYATLVTKRLFWFA 388
WP_082846088 433 MDMGLTLEQIkvkHHrdSFFSKGDRKAFIDFqGMTh-sSgdDelyagrRKLSLSFRLPRGSYATILVKRITEGA 505
WP_076349446 316 AAFGLTWTDMrvkHLkdVFFSKGSRDPLLVPeNVKt-eVfkDdlhrnkQAIRLAFELPKGSYATILVKRITEAA 388
WP_095413732 315 AELGLEVRQLrikYPrdSFFSKGDRPLVFFPrELAh-qTgdDelnpgkQQLTLSFELPRGSYATILVKRITEDR 387
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