2JZ5,2KHD


Conserved Protein Domain Family
DUF406

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pfam04175: DUF406 
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Protein of unknown function (DUF406)
Members of this family appear to be found only in gamma proteobacteria. The function of this protein family is undetermined. Solution of the structures of the two members of this family investigated bear some resemblance to that of the single domain enzyme pterin-4a-carbinolamine dehydratase, PDC. Although the residues of PCDs involved in binding of metabolite are not conserved in the two structures under study, they do correspond to a surface-region structurally aligned with residues that are highly conserved, eg Glu 89, suggesting that this region is also involved in binding of a ligand, thereby possibly constituting a catalytic site of a yet uncharacterized enzyme specific for gamma proteobacteria.
Statistics
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PSSM-Id: 427760
Aligned: 29 rows
Threshold Bit Score: 78.4529
Created: 22-Mar-2022
Updated: 17-Oct-2022
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2JZ5_A          1 AGEIGFIIKEGDEVADVTIFAETKDALESELAKYIELAKSV---CAGV-EYNVSELTE-ESKELTARFKFEVSAEKLIFE 75  Vibrio parahae...
WP_013345255   16 FVEVDSVIDETDAIMALVIEAPNESTARAQFQLLLDQAQGQ--------ISGVTGQAQwQAGRLDGTLHFPSAAQRLAFE 87  Ferrimonas bal...
jgi:Fbal_2225  16 YMDVGAVISEEDTVLSLPITAASEADARAEFEKLEAAAKAR---FADV--QTDAQWQQ-ETGTLQARLVFSCAAERLIFE 89 
jgi:Tola_0083  17 VAEVGTIIRDGDDLVMIPVEGDNEEDARARQERYIAVAKEA---CPDVlVSSELQTVE-DGVVLNTTLQFTCTAEKMIFE 92 
WP_011704341   19 FAEIGTIIGEGDDVMELVIEAAAEADARAKLAAYEALAKQV---TAEAtSSSELSQGA-NGVILKARLQFTCTAEKLIFE 94  Aeromonas
CCO60644       17 SAEMGFIIKEGDDVAQVTLYGAEDSQLDAELNKYVELAKTV---SDEV-QHETQKLEG-ESG-LQVRFKFTCSAEKLIFE 90 
P32162         14 AIDIGTVIDNDNCTSKFSRFFATREEAESFMTKLKELAAATssaDEGAsVAYKIKDLE-GQVELDAAFTFSCQAEMIIFE 92  Escherichia co...
Q6LK04         17 SAEVGFIIKEGDDVAEVSIFAQGKVALENEFNNYLALAKEV---NANF-EYQASELTE-ESTELTAHIKFECSAEKLIFE 91  Photobacterium...
WP_015464437   19 FVELGSVINADDTVFVLPFKGSSLDGVNKMAKKYIDAAKKR---FESViISTEETQKE-EIFHIEVTFTFECTAEKLIFE 94  Psychromonas s...
ABM02723       17 FVELGSVISDDDTVLVLPFTGKESVAVTALAIKYIDAAKTR---FDSVvVTEQEITAD-DLVTLEVTFNFDCTAEKLIFE 92 
2JZ5_A         76 LKTR 79  Vibrio parahaemolyticus RIMD 2210633
WP_013345255   88 MGLR 91  Ferrimonas balearica
jgi:Fbal_2225  90 MQLn 93 
jgi:Tola_0083  93 MRAR 96 
WP_011704341   95 MRAR 98  Aeromonas
CCO60644       91 LKTR 94 
P32162         93 LSLR 96  Escherichia coli K-12
Q6LK04         92 LKSR 95  Photobacterium profundum
WP_015464437   95 MGLs 98  Psychromonas sp. CNPT3
ABM02723       93 MGLs 96 
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