Conserved Protein Domain Family
Rhizopine-oxygenase-like

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cd03511: Rhizopine-oxygenase-like 
This CD includes the putative hydrocarbon oxygenase, MocD, a bacterial rhizopine (3-O-methyl-scyllo-inosamine, 3-O-MSI) oxygenase, and other related proteins. It has been proposed that MocD, MocE (Rieske-like ferredoxin), and MocF (ferredoxin reductase) under the regulation of MocR, act in concert to form a ferredoxin oxygenase system that demethylates 3-O-MSI to form scyllo-inosamine. This domain family appears to be structurally related to the membrane fatty acid desaturases and the alkane hydroxylases. They all share in common extensive hydrophobic regions that would be capable of spanning the membrane bilayer at least twice. Comparison of sequences also reveals the existence of three regions of conserved histidine cluster motifs that contain eight histidine residues: HXXXH, HXXHH, and HXXHH. These histidine residues are reported to be catalytically essential and proposed to be the ligands for the iron atoms contained within homologs, stearoyl CoA desaturase and alkane hydroxylase.
Statistics
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PSSM-Id: 239588
Aligned: 10 rows
Threshold Bit Score: 323.554
Created: 17-Feb-2006
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
putative
Feature 1:putative di-iron ligands [ion binding site]
Evidence:
  • Comment:Putative catalytically essential di-iron binding histidine residues; based on similarity to stearoyl-CoA desaturase.
  • Comment:Mutation of any one of these eight histidines in stearoyl-CoA desaturase resulted in complete inactivity.
  • Citation:PMID 7947684

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                         #   #         
3411183      33 VPRKEMKALmqrsDAPAIRDTALWLGSMAVFAglgiy---fwgsWIALPFFLAYGVLygsaSDSRWHECGHGTAFktRWM 109 Rhizobium legumi...
BAB54169     10 LAPEERSRLtaksNAAGLVQLGAHWGAIAIIGslia-----akvPFWPLLMLPQGILiv-fLFTLLHETVHRTAFdtQWL 83  Mesorhizobium lo...
ZP_00553131  35 LTREQLKHFmqrsNAPGLWRVALWLVMLAGSTmlivl---awnsWLIWPAMFVQGVIlv-hHFSLQHECVHYTVFrtRWL 110 Jannaschia sp. CCS1
ZP_00861934  16 LTPPVLQELcrrsDLQGALRTLGHYGAIIVVGiliawiasthgvLWALPLLPVQGVLva-fLFMAVHETAHKTAFdsRRL 94  Bradyrhizobium s...
ZP_00959897  27 LGAETLARLnrtaDAPGLWHLAGHGGLILGLGiwia-----qgwVLWWALLPVQGIAlc-fLFTLEHEATHKTPFatPWL 100 Roseovarius nubi...
BAC08806     11 LSVAELQDLnqrsNWAGLRQLALHLGILLVSGavgltq-fgkhgWLAMPALFLCGTSla-tMFATLHECSHRTAFasQWL 88  Thermosynechococ...
YP_400730     8 LTAQELAVLnqrsDAKGWQQFFGHLALLAVSGglwls--gwggwAVRLPALVTYGFGla-aMFAAVHECVHRTAFasNRA 84  Synechococcus el...
AAZ36334     37 ISRQRMKQLmqrrDGPALLDTAIWLLALLVSGfggyw---fwgsWACVPFFLAYGVLyataSNPRWHETGHGTAFktRWM 113 Pseudomonas syri...
ZP_00945007  36 VPRPLMKDLmkrrDGRAIRDTVLWFAAIGVAGalavwa-wtlqsWWALPAFLLYAGLyagpADSRWHECGHGTAFktRWM 114 Ralstonia solana...
ZP_00316102  18 LPRQEFRQFmqrnNYRGLLDTALWFTCLALSGylayt---llgtYWAIPAFFVYGVFyc-aCDARWHESSHGTVFhtAWL 93  Saccharophagus d...
Feature 1                             #  ##                                                     
3411183     110 NAIVYqiaCFMIMRNPVTWRWSHARHHTDTVivgrDPEIAvmrpp-dllrLILDFFGIldvwhavvdtlrnsagnvseee 188 Rhizobium legumi...
BAB54169     84 NDFVArvcSLALALPADWFRYFHFAHHRFTQdpenDPELAfpkpe-tlrqYLVHVSGIplwwghlktl---yanavggsq 159 Mesorhizobium lo...
ZP_00553131 111 NDVVGqicGYTILLPHRFFRYEHCDHHTYTQvvgeDPEQIpmpk--tfgeYFLYLSALpywktkftevfrhasgglsdae 188 Jannaschia sp. CCS1
ZP_00861934  95 NVVIGnlsGFLIGLPYDYYCLFHWEHHRHTQdpqrDPELIvgpkprsetqLAIAYSGLvqvagrlrlvl--khavtgevt 172 Bradyrhizobium s...
ZP_00959897 101 NEAAGhlsGLLILLPFTWFRYFHLAHHRHTNdperDPELLsgakpetwraYLIHVSGLpywwgmlgqi---lhnardrdp 177 Roseovarius nubi...
BAC08806     89 NDAVAwlaGLLCFYNSDFYRRYHRWHHRYTQipgkDPELAdgkpt-nwreYLWELSGLpwwwgklktfw--hlflgrleg 165 Thermosynechococ...
YP_400730    85 NDTVAwiaGLLSFYNSSFYRRYHKWHHRFTQipgkDPELAdpkpq-twpqYLLELSGLpwwlgkirthf--kvatgqfad 161 Synechococcus el...
AAZ36334    114 NDGLYqvaSFMCMFEPHVWRWSHARHHTDTIvvgrDPEIVeprpp-slvmMFLSLFQIplliktmggvcrhafahmseqe 192 Pseudomonas syri...
ZP_00945007 115 NDTLYqvaAFMLLRQPTVWRWSHTRHHTDTLvtgrDPEIAvprpp-rllyLGLALFNLrgglrelravlrhargtvgaae 193 Ralstonia solana...
ZP_00316102  94 NTALCfiaTAMQQRDIIFTHWSHVRHHSYTLindiDPEITvtrpp-tfweHFLNFWSLgeakyyipilfqhafgivskda 172 Saccharophagus d...
Feature 1                                                                                       
3411183     189 kTFIPeteQRKVVRvaRIWLASYagtials-mwlgsvlPLLLIGLPRLYGawhaamTGLLQHGGLadnvtdyrlnsrtvy 267 Rhizobium legumi...
BAB54169    160 eSYVPpkgRPKVRAeaCAMIAFYavvllla-vyfrlsvLVYVWIIPALLGqpflrlYLLAEHGRCpfvanmlen-trttl 237 Mesorhizobium lo...
ZP_00553131 189 rGFIPkeeHAAVARdaRLMLAFYaacitgm-aasgwwgLVWLWFIPLILGepvmrfIRMTEHVGRpnvaqmsdn-trtnl 266 Jannaschia sp. CCS1
ZP_00861934 173 vPWVPagrRAAIVReaRAYVAGYallligs-lvlhstlLLWVWVLPLLLGqlilrpYLYAEHTGCdhtrrafhn-trttl 250 Bradyrhizobium s...
ZP_00959897 178 aPYIParaRPRIRReaRVMLALYaltgas---llisplLFWVWLLPLLLGqpalrlYLLAEHGRCafvanmlen-trtty 253 Roseovarius nubi...
BAC08806    166 yPYITpeaRPAVIRsaRLQLLTYggaiala-valgypwLVLAWIGLLAVGqpvlrfILLAEHTHCshdanglmn-trttl 243 Thermosynechococ...
YP_400730   162 yPYIPaeaQSEVQRslLWQLAVYgalials-lglkqplFVTAWLLPLAVGqpilraILLAEHSGCseddnpltn-trttl 239 Synechococcus el...
AAZ36334    193 kDFIPvseWPRVFLaaRIWLAIYagvvaaa-lylqswlPLMYVGLPMLYGgwlsylFGLTQHVGLaedvldhrsncrtiy 271 Pseudomonas syri...
ZP_00945007 194 aTFVPateHRRVVReaRAWLAVYatiavacvatrsilpALLVGPVPALAGawlylfFGLPQHAGLpenvldhrlncrtvy 273 Ralstonia solana...
ZP_00316102 173 kKFVPkeeYTKMFWwaRASLLVNlipialc-fylhsvvPILFFGLPKIYGnliqraFILAQHAGLdddtwdhrrnsrtik 251 Saccharophagus d...
Feature 1                     #  ##                                 
3411183     268 mnpiSRFIYWNMNYHVEHHMFPMVPYHALPKLHalIKHDLPAPNTSIIDGYR 319 Rhizobium leguminosarum bv. viciae
BAB54169    238 tnwvVRKLAWNMPFHAEHHAYPGVPFHQLPQFHalIERHLKVVEPGYVSFHE 289 Mesorhizobium loti MAFF303099
ZP_00553131 267 vsapMRFLCWNMNYHAEHHYVSSVPFHALPRLHetLKDHIHVEPGGYIGAHR 318 Jannaschia sp. CCS1
ZP_00861934 251 ttraVHWLTWNMPYHVEHHAYPAVPFHALPRLHaiVDDEIKYRGQGYIAVTR 302 Bradyrhizobium sp. BTAi1
ZP_00959897 254 tnraVRYLAWNMPYHIEHHSLPNVPFHRLPELNrlMAEDLRVTSEGYARFTR 305 Roseovarius nubinhibens ISM
BAC08806    244 tlwpIRLFMWNMPYHTEHHLYPSIPFHSLGKAHtlLKSHLGHCVSGYFQVHR 295 Thermosynechococcus elongatus BP-1
YP_400730   240 twapLRWLMWNMPFHAEHHFCASIPFHALPSAHekLSSYWGHLDRGYLAVNK 291 Synechococcus elongatus PCC 7942
AAZ36334    272 mnrvLRFLYMNMNYHLEHHMYPMVPYHALAQLHeeIRHDCPPPYASLGEAFK 323 Pseudomonas syringae pv. phaseolicola 1448A
ZP_00945007 274 mnpvFRFLYWNMNYHVEHHMFPMVPYHALPRLHeaIRADCPTPYPNMLSAYR 325 Ralstonia solanacearum UW551
ZP_00316102 252 vnplLGFLYMNMQYHTEHHMNPLMPFHQLPKFSkrIADQMPKPYNGLIAVYK 303 Saccharophagus degradans 2-40

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