3RAM


Conserved Protein Domain Family
M20_Acy1L2

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cd03887: M20_Acy1L2 
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M20 Peptidase Aminoacylase 1-like protein 2, amidohydrolase family
Peptidase M20 family, Aminoacylase 1-like protein 2 (ACY1L2; amidohydrolase) subfamily. This group contains many uncharacterized proteins predicted as amidohydrolases, including gene products of abgA and abgB that catalyze the cleavage of p-aminobenzoyl-glutamate, a folate catabolite in Escherichia coli, to p-aminobenzoate and glutamate. p-Aminobenzoyl-glutamate utilization is catalyzed by the abg region gene product, AbgT. Aminoacylase 1 (ACY1) proteins are a class of zinc binding homodimeric enzymes involved in hydrolysis of N-acetylated proteins. N-terminal acetylation of proteins is a widespread and highly conserved process that is involved in the protection and stability of proteins. Several types of aminoacylases can be distinguished on the basis of substrate specificity. ACY1 breaks down cytosolic aliphatic N-acyl-alpha-amino acids (except L-aspartate), especially N-acetyl-methionine and acetyl-glutamate into L-amino acids and an acyl group. However, ACY1 can also catalyze the reverse reaction, the synthesis of acetylated amino acids. ACY1 may also play a role in xenobiotic bioactivation as well as the inter-organ processing of amino acid-conjugated xenobiotic derivatives (S-substituted-N-acetyl-L-cysteine).
Statistics
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PSSM-Id: 349883
Aligned: 47 rows
Threshold Bit Score: 338.012
Created: 16-Jun-2005
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
 
metal binding
Conserved site includes 5 residues -Click on image for an interactive view with Cn3D
Feature 1: metal binding site [ion binding site], 5 residue positions
Conserved feature residue pattern:C H E H [KH]Click to see conserved feature residue pattern help
Evidence:
  • Structure:3RAM: Staphylococcus aureus endopeptidase antibiotic resistance factor HmrA binds two zinc ions; contacts at 4.0A
  • Comment:conserved metal-coordinating cysteine in this subfamily differs from archetypal M20 motif

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1                                                                                        
3RAM_A        12 ETNKYSYIEISHRIHERPELGNEEiFASRTLIDRLKeh-dfEIETEIaghaTGFIATYDsgldgpAIGFLAEYDALPgl- 89  Staphylococcus ...
YP_001087004  15 DENREKILKIGQGIYKNPEYGYKEfKTTEAVSNFFEqelnlSVEKNIa--vTGCKADANsskkgpHISILGELDGIScke 92  Clostridium dif...
ADO76532      15 DANQEKIIEIVNEIYQNPELGYKEkKTTEILASAFKel-eiDFEKNKp--lTGINSIFKmdnpgpTIAVLGELDAVTcae 91  Halanaerobium p...
CAG76983      43 AAKRQQFCTLSDGIWDTPELNYEEhRSAAQHEAILKaegfrLTKGIAnm-pTALLGEFGeg--lpIVAILGEYDALPgls 119 Erwinia carotov...
CAJ67613      17 EEKKTSFEKVSDYLFSNPELAFEEyKSQKALCDLLEen-efNVTKGVggleTSFEAVYSngtngkTVAFLAEYDALPgm- 94  Clostridium dif...
CAJ69306      10 DSKKEKILGLCQSLYDEPEIALQEyKSAKKISEFLRee-gfDVEENLagmaTAFKATKKngd-gpKIAFIAEYDALPgn- 86  Clostridium dif...
BAC72609      16 SLLRPRMEEVSRAIHARPELKFAEfHAVEVLTGWLAea-gfAVRAGAggldTAFVAAHEgsepgpYVAVLAEYDALPgv- 93  Streptomyces av...
AAO36929      10 DNIALELNNMADNIFDNPEEGLKEyKACDLLCDYLKek-efKVEKGIggfeTAFRAVYEfgtggpSIGLLCEYDALAni- 87  Clostridium tet...
CAC11380       3 KEIRDETLEVSRRIYEYAELGSQEyRSSRLIADHLSrh-gfNVEMPYggmeTAFRATCYrg--gpSVGVLAEYDALPn-- 77  Thermoplasma ac...
EDK87675      10 DSISSEILAMADSIFDDPELGLNEfRAMKKITDFLEkn-nfEVEKNIygfeTAFRAKYTsgkggiNIGLLCEYDALEgl- 87  Fusobacterium n...
Feature 1                           # #                                   #                      
3RAM_A        90 ----------------gHACGHNIIGTASVLGAIGLKQVIDQIgg--kVVVLGCPAEEGGen--------------gSAK 137 Staphylococcus ...
YP_001087004  93 hkda-------neigasHTCGHNIQIAGMLGAAVGLVKSGVLEhldgkVSFMATPAEEFIeleyreqlkkegkityfGGK 165 Clostridium dif...
ADO76532      92 hpda------dpktnaiHACGHNIQLGVMYGIAAAFKKAGIESelagaLKFISTPAEEFIeleyrdqlkksdqisffGGK 165 Halanaerobium p...
CAG76983     120 qqanvaepkplenggngHGCGHNLLGTAALQAATAVKDYLQKHslagtVRFYGCPAEEGG-----------------SSK 182 Erwinia carotov...
CAJ67613      95 ----------------gHACGHNIIGTSSVGAGIILKEIMKKHniegtVKVFGTPAEERV-----------------GGK 141 Clostridium dif...
CAJ69306      87 ----------------gHACGHHLIASMGVGAGIALSSILDTYkg--eVSIIGTPAEETG-----------------DGK 131 Clostridium dif...
BAC72609      94 ----------------gHGCGHNLIAAGGAAAAITAVRALPHHpg--tIAVIGTPGEEMGg----------------GGK 139 Streptomyces av...
AAO36929      88 ----------------gHACGHHMQGPAILGAAIALKEVVKDQpf--kVVVYGTPAEETI-----------------GGK 132 Clostridium tet...
CAC11380      78 ----------------gHSCGHNLIAAWAFGTAVTLCEDFGIS-----VTVFGTPSEEGIgp-------------yaGSK 123 Thermoplasma ac...
EDK87675      88 ----------------gHACAHHMQGPSIIATAVALKEVLKDYdf--nIIVYGTPAEETL-----------------GAK 132 Fusobacterium n...
Feature 1                          #                                                             
3RAM_A       138 ASYvkaGVIDQIDIALXIHPgn----etYKTIDTLAVDVLDVKFYGKSAHAseNADEALNALDAXISyfngvaql--rqh 211 Staphylococcus ...
YP_001087004 166 QELikrGYFDDIDISMMFHAsdlgedkaLVGPESNGFVGKKVKFIGKESHAgsAPHDGINALNAAMLainnvnalretfk 245 Clostridium dif...
ADO76532     166 QELikrGYFKDVDISIMMHSldlaskkaLIAPKGNGFIGKKVKFTGQESHAgsAPEKGINALNAAVLamnninaqretfa 245 Halanaerobium p...
CAG76983     183 GFMvkeGVFDDVDIAICWHPatf---tgVNSPVSLACNELNFYFKGRAAHAasSPHLGRSALDAVELmnvgvnym--reh 257 Erwinia carotov...
CAJ67613     142 ITMikeGVFNNVDAALILHPsd----asMPDDISFAQVNLKFDFTGKASHAaaFPWEGKSALSGVIAlfnsvnsm--rlh 215 Clostridium dif...
CAJ69306     132 PYLiehGVFDGYDAAMMIHPns----ktCVTPEIIAIGGLDFIFTGKASHAgaKPYNGINALDAVVLlynninal--rqq 205 Clostridium dif...
BAC72609     140 VRLadaGVFAGVDAAVMFHPgd----rsLTTQHGLAAAHLRVGFTGVSAHAarSPWEGRSALAAAQLflnaidam--rqf 213 Streptomyces av...
AAO36929     133 LQMvkeGCFKDIDVAMMMHGgp----etTTDVKSLAMSKFKVIFNGKSAHAalKPENGKSALDALILsfqgiefm--reh 206 Clostridium tet...
CAC11380     124 AILvekNLIRDVDFVIGMHPdd----rwAVGSVSLADLTIEAEFSGKSSHLl-GPDYGINALTPAIEtyialnnlrssis 198 Thermoplasma ac...
EDK87675     133 VAMdkkGAFRDIDVALMMHGsp----mtTTDVKSMALSNFDIIFHGVSSHAalAPENGRSALDGLLIlfqgiefl--reh 206 Fusobacterium n...
Feature 1                                                                                        
3RAM_A       212 ikkdqRVHGVILDGGk-AANIIPDYTHARFYTRAxtrkeldiLTEKVNQIARGAAIQTGCDYEFGPIqngvnefiktPKL 290 Staphylococcus ...
YP_001087004 246 eservRFHPIITKGGd-IVNVVPADVHMESYVRArtingmidANERINKALMAGGMAVGADVEITEIpgylp-ilryKSL 323 Clostridium dif...
ADO76532     246 esdkiRVHPIITKGGd-IVNIVPADVRLESYVRArnigaikkANLKVDRSLKAAAMAVGAEVEIKDIpgylp-llnnQDL 323 Halanaerobium p...
CAG76983     258 mpssaRVHYAITDSGghAPNVVQANATVRYLVRArqlpelhqLVKRVKKIAEGAALMTETEVSSEVIsgdan-llanPPL 336 Erwinia carotov...
CAJ67613     216 lkdyaRVHGIITDGGs-IHNIIPEKSTAIFNVRAlsieylneICEMLKNCAKGAAISTGTNVEIVQLdeiykeikndSEL 294 Clostridium dif...
CAJ69306     206 lvdgtRIHGIILEAGt-AANVIPDMGKVRLEIRAkeqnyfdeVVEKVKNCARGAAIATGCELEFYHFeptcqglnenKVL 284 Clostridium dif...
BAC72609     214 vpptaRLHGIVSDGGq-APNVIPAHAAVDLYVRDrtaasaeaLVERVRRAAEGAALATETTAEVHETgplygerrdnTVL 292 Streptomyces av...
AAO36929     207 vvddvRMHYTILSAGgtAANVVPAQAIGSFYVRSynrdylndVIRRFRNVMKGAALMTDTEYEIITEkeidn-kipvLSL 285 Clostridium tet...
CAC11380     199 dlkrpIIGMIIREGGk-ASNVIPDRSVMEIDLRSskrryledLAARAKDIIGNISRMHGCDFRIRDVtpvyeeyisnETI 277 Thermoplasma ac...
EDK87675     207 vkedtKMHYTIVDAGg-PANVVPKYAKAKVSLRSydrkylddVVRRFKKVVEGAAMMTETTCEIIETkslds-kipvLSL 284 Fusobacterium n...
Feature 1                                                                                        
3RAM_A       291 DDLFAKYAEEVGeav----------------------------------------------idDDFGy--------GSTD 316 Staphylococcus ...
YP_001087004 324 DNLFKNNLEDLGlkgk--------------------------------------------vidGGDFt--------GSFD 351 Clostridium dif...
ADO76532     324 DNILKENLLELIeaed--------------------------------------------itvGGDFt--------GSFD 351 Halanaerobium p...
CAG76983     337 EARMHEHLLALGpiafddedrkmaamfqtalsaediaesyarfgvkpqpdltlhdgiyplyspNEAFi--------GSTD 408 Erwinia carotov...
CAJ67613     295 VNIVRQNFEVLGed-----------------------------------------------yvERDLsq-----giGSTD 322 Clostridium dif...
CAJ69306     285 VDIFTKIMEEFGi--------------------------------------------------YEDEqv-----mlGSTD 309 Clostridium dif...
BAC72609     293 AERFGDTVRALGld------------------------------------------------iTAAGpds----paGSSD 320 Streptomyces av...
AAO36929     286 NDIVMENAKLVNap-----------------------------------------------tiRPPRqk------tGSTD 312 Clostridium tet...
CAC11380     278 DNTLEEELRSHGi--------------------------------------------------DPVNvhrtneaamGSTD 307 Thermoplasma ac...
EDK87675     285 NRILMENAEFVNap-----------------------------------------------riQAPRer------tGSTD 311 Fusobacterium n...
Feature 1                                #                             
3RAM_A       317 TGNVShvVPTIHPHIKIgsrNLVGHThRFREAAasVHGDEALIKGAKIXALXGL 370 Staphylococcus aureus subsp. aureus N315
YP_001087004 352 FGDVShiMPTLHPMIGGv--KGALHTrDFEIVDe-DLAYIIPAKAMALTVVDLL 402 Clostridium difficile 630
ADO76532     352 FGDIShlMPALHPFFGGv--EGDLHTrNFKTKAq-KTAVILPIKALSLTIIELL 402 Halanaerobium praevalens DSM 2228
CAG76983     409 VGTVSwvVPTVQIRSATyaiGTPAHSwQLVAQGktGAAHKGMEYAAKAMASLAI 462 Erwinia carotovora subsp. atroseptica SCR...
CAJ67613     323 TGNLTheIPAIQAYIKLk-eNTATHTdEFAVAAggEEGRVALIKAIKVLAMCGV 375 Clostridium difficile 630
CAJ69306     310 MGNLSqiMPCIHPLMKFsenGEELHTkEFLEASinSYAKDRVIDGIKILALTGF 363 Clostridium difficile 630
BAC72609     321 IGNLSqlLPVIHPYIQIaefGTPSHSdAMREAAatPLAHDRAEVAAAGLARVVT 374 Streptomyces avermitilis MA-4680
AAO36929     313 FGSVMyqVPGTCIRIAFveeGTSSHSeEYLKAGktDEAHNAIMLSAKILADSAY 366 Clostridium tetani E88
CAC11380     308 EANIShiIPTGHIDVKIvqpSIPAHTdEFRMAAdpDKAADPLMTAIEATASAAA 361 Thermoplasma acidophilum
EDK87675     312 FGNVMykVPGSCIRIAFvplGTSSHSdTFIECGknEDAHKAILLASKILADSVY 365 Fusobacterium nucleatum subsp. polymorphu...

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