Conserved Protein Domain Family
HTH_Tnp_1

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pfam01527: HTH_Tnp_1 
Transposase
Transposase proteins are necessary for efficient DNA transposition. This family consists of various E. coli insertion elements and other bacterial transposases some of which are members of the IS3 family.
Statistics
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PSSM-Id: 426308
Aligned: 22 rows
Threshold Bit Score: 58.1341
Created: 21-Aug-2024
Updated: 4-Dec-2024
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q92W24        17 RGNRRWPDAVKARIVAES--LEPGVRVVDVARRHDVVPHQLSFWRRQAR-EGILALPFEampglsesgdaepafVPLAIA 93  Sinorhizobium m...
Q326U6        94 ERRTSYSREFKVRLAKQA--LQPGAVVARIAREHDINDNLLFKWKSQYE-DGLLSDDDIqec----------mpVPVALT 160 Shigella dysent...
3_pfamImport   1 -RRRRWTTEQKLTIIEQS--FEPGETVSSTARRHGVAPNLLYRWRRLLS-EGGAAAVDSdepv-------vgnsEVKKLE 69 
1_pfamImport   1 ERRRRWSTAEKLAIIHET--YEADATVSIVARRHGIQPNQLFAWRKLASqGALTATAAEeevv--------pasEYRALQ 70 
O86607         2 GT-SKYSPEFRADAVALYh-ASPGGTYASVAKDLGVNHETLRTWVRD---AEQAGRPGAv--------------EATAMD 62  Streptomyces co...
2_pfamImport   2 AAPKKYPDELRERAVRLYreSDPKPAIRRLAEQLNVHPEALRNWIRQDE-ADRGQRQDR---------------PATDMA 65 
Q7ARJ6         8 QTKRRFSPEFKLEAIEQV--VKYQRSTIEVARALELDPSQLRKWIRQYKeEVSGMTPDNp--------------ALTPEQ 71  Yersinia pestis
WP_003112569   3 KQRRTFSAEFKREAAALV--LDQGYSHIDACRSLGVVDSALRRWVKQLQaERQGVTPKSk--------------ALTPEQ 66  Pseudomonas aer...
Q7CM17         4 NKKGKYSPEFKEQAVKRT--LSGSFTIKEVAGSLGISYFVLRQWRGEYLkKSEDQLPLTd--------------KQLKES 67  Leptospira inte...
Q8EXI1         2 KGRRKYSPEFREQAVNRT--LNGSFTIKEVAESLGVSYFVLRQWKAEHLkKKETEQPLPd--------------KQLKES 65  Leptospira inte...
Q92W24        94 AEPSEAVNVLA 104 Sinorhizobium meliloti
Q326U6       161 DTPEPTRPVTN 171 Shigella dysenteriae Sd197
3_pfamImport  70 DRVRELERML- 79 
1_pfamImport  71 AQVKELQRLL- 80 
O86607        63 KENRQLRARVK 73  Streptomyces coelicolor
2_pfamImport  66 EENRRLKRENA 76 
Q7ARJ6        72 REIQSLRAQIK 82  Yersinia pestis
WP_003112569  67 QKIQELEARIN 77  Pseudomonas aeruginosa
Q7CM17        68 EELKKLRKENl 78  Leptospira interrogans
Q8EXI1        66 EELKRLRKENl 76  Leptospira interrogans
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